RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 MRPS16Q9Y3D3 137 aaKnown RBP14.04□□□□□ -0.16
PNKP-215ENST00000600910 C1orf196B1AJZ1 125 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BKO60814 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BJP06899 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BOP23527 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BBP33778 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BDP58876 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BCP62807 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST2H2BEQ16778 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BHQ93079 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BNQ99877 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 HIST1H2BMQ99879 126 aa14.02□□□□□ -0.16
PNKP-215ENST00000600910 TRAV8-6A0A0B4J262 113 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 FA2HQ7L5A8 372 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 CHCHD7Q9BUK0 85 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 Q0VG73 95 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 WFDC10BQ8IUB3 73 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 URB1-AS1Q96HZ7 61 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 CHCHD5Q9BSY4 110 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 UPK3BQ9BT76 320 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 TMEM243Q9BU79 118 aa14.01□□□□□ -0.17
PNKP-215ENST00000600910 K7EMI3 77 aa14□□□□□ -0.17
PNKP-215ENST00000600910 ESDP10768 282 aa14□□□□□ -0.17
PNKP-215ENST00000600910 NIT1Q86X76 327 aa14□□□□□ -0.17
PNKP-215ENST00000600910 LINC01546A6NGU7 62 aa13.99□□□□□ -0.17
PNKP-215ENST00000600910 LINC00614P0C842 121 aa13.99□□□□□ -0.17
PNKP-215ENST00000600910 LAGE3Q14657 143 aa13.99□□□□□ -0.17
PNKP-215ENST00000600910 LGALS9CQ6DKI2 356 aa13.99□□□□□ -0.17
PNKP-215ENST00000600910 BAGE3Q86Y29 109 aa13.99□□□□□ -0.17
PNKP-215ENST00000600910 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.98□□□□□ -0.17
PNKP-215ENST00000600910 IGKV2-29A2NJV5 120 aaPredicted RBP13.98□□□□□ -0.17
PNKP-215ENST00000600910 RAB5BP61020 215 aa13.98□□□□□ -0.17
PNKP-215ENST00000600910 RNASEKQ6P5S7 137 aaKnown RBP13.98□□□□□ -0.17
PNKP-215ENST00000600910 ORMDL2Q53FV1 153 aa13.97□□□□□ -0.17
PNKP-215ENST00000600910 AP5S1Q9NUS5 200 aa13.97□□□□□ -0.17
PNKP-215ENST00000600910 UBE2L6O14933 153 aa13.97□□□□□ -0.17
PNKP-215ENST00000600910 GAGE6Q13070 117 aa13.97□□□□□ -0.17
PNKP-215ENST00000600910 C20orf203Q8NBC4 194 aa13.97□□□□□ -0.17
PNKP-215ENST00000600910 TMEM262E9PQX1 116 aa13.96□□□□□ -0.17
PNKP-215ENST00000600910 SIVA1O15304 175 aa13.96□□□□□ -0.17
PNKP-215ENST00000600910 LINC00476Q8WZB0 136 aa13.96□□□□□ -0.17
PNKP-215ENST00000600910 LY6G6CO95867 125 aa13.95□□□□□ -0.18
PNKP-215ENST00000600910 Q9H8V8 135 aa13.95□□□□□ -0.18
PNKP-215ENST00000600910 RPL39P62891 51 aaKnown RBP13.94□□□□□ -0.18
PNKP-215ENST00000600910 Q8N3U1 123 aa13.94□□□□□ -0.18
PNKP-215ENST00000600910 CHCHD1Q96BP2 118 aaKnown RBP13.94□□□□□ -0.18
PNKP-215ENST00000600910 VPS13DQ5THJ4 4388 aa13.94□□□□□ -0.18
PNKP-215ENST00000600910 DNAH1Q9P2D7 4330 aa13.94□□□□□ -0.18
PNKP-215ENST00000600910 H7C423 109 aa13.93□□□□□ -0.18
PNKP-215ENST00000600910 SERF1AO75920 110 aa13.93□□□□□ -0.18
PNKP-215ENST00000600910 BTF3P20290 206 aaKnown RBP13.93□□□□□ -0.18
PNKP-215ENST00000600910 LINC00310P59036 64 aa13.93□□□□□ -0.18
PNKP-215ENST00000600910 MPV17L2Q567V2 206 aa13.93□□□□□ -0.18
PNKP-215ENST00000600910 TMEM18Q96B42 140 aa13.93□□□□□ -0.18
PNKP-215ENST00000600910 A0A087WX48 190 aa13.92□□□□□ -0.18
PNKP-215ENST00000600910 DNAH10OSP0CZ25 163 aa13.92□□□□□ -0.18
PNKP-215ENST00000600910 C2orf66Q6UXQ4 117 aa13.92□□□□□ -0.18
PNKP-215ENST00000600910 ALMS1Q8TCU4 4167 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 IGHV3-30P01768 117 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 IGHV3-33P01772 117 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 IGHV3-30-3P0DP02 117 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 IGHV3-30-5P0DP03 117 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 FGF6P10767 208 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 PKIAP61925 76 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 PMCHL1Q16048 86 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 LINC01556Q5JQF7 62 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 AMMECR1LQ6DCA0 310 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 Q8N976 141 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 CYSLTR1Q9Y271 337 aa13.91□□□□□ -0.18
PNKP-215ENST00000600910 NUPR1O60356 82 aa13.9□□□□□ -0.18
PNKP-215ENST00000600910 HSBP1O75506 76 aa13.9□□□□□ -0.18
PNKP-215ENST00000600910 NDUFA6P56556 154 aa13.9□□□□□ -0.18
PNKP-215ENST00000600910 UBE2D4Q9Y2X8 147 aa13.9□□□□□ -0.18
PNKP-215ENST00000600910 G0S2P27469 103 aa13.9□□□□□ -0.19
PNKP-215ENST00000600910 RBX1P62877 108 aa13.9□□□□□ -0.19
PNKP-215ENST00000600910 A0A096LNJ9 63 aa13.89□□□□□ -0.19
PNKP-215ENST00000600910 MRPL52Q86TS9 123 aaKnown RBP13.89□□□□□ -0.19
PNKP-215ENST00000600910 TOMM6Q96B49 74 aa13.89□□□□□ -0.19
PNKP-215ENST00000600910 IGLV4-60A0A075B6I1 120 aa13.88□□□□□ -0.19
PNKP-215ENST00000600910 A0A1B0GUV1 79 aa13.88□□□□□ -0.19
PNKP-215ENST00000600910 HBDP02042 147 aa13.87□□□□□ -0.19
PNKP-215ENST00000600910 ZNF25P17030 456 aaPredicted RBP13.87□□□□□ -0.19
PNKP-215ENST00000600910 FAM19A2Q8N3H0 131 aa13.87□□□□□ -0.19
PNKP-215ENST00000600910 SMAGPQ0VAQ4 97 aa13.86□□□□□ -0.19
PNKP-215ENST00000600910 COA6Q5JTJ3 125 aaKnown RBP13.86□□□□□ -0.19
PNKP-215ENST00000600910 TMEM101Q96IK0 257 aa13.86□□□□□ -0.19
PNKP-215ENST00000600910 TIMM21Q9BVV7 248 aa13.86□□□□□ -0.19
PNKP-215ENST00000600910 DGAT2L7PQ6IED9 249 aa13.86□□□□□ -0.19
PNKP-215ENST00000600910 OR5A1Q8NGJ0 315 aa13.86□□□□□ -0.19
PNKP-215ENST00000600910 SPANXA1Q9NS26 97 aa13.86□□□□□ -0.19
PNKP-215ENST00000600910 CSDC2Q9Y534 153 aaKnown RBP13.86□□□□□ -0.19
PNKP-215ENST00000600910 ANGP03950 147 aaKnown RBP13.85□□□□□ -0.19
PNKP-215ENST00000600910 KLK12Q9UKR0 248 aa13.85□□□□□ -0.19
PNKP-215ENST00000600910 PYGO1Q9Y3Y4 419 aa13.84□□□□□ -0.19
PNKP-215ENST00000600910 TRAV9-2A0A087WT02 112 aa13.83□□□□□ -0.2
PNKP-215ENST00000600910 LCE6AA0A183 80 aa13.83□□□□□ -0.2
PNKP-215ENST00000600910 LINC01549A6NIU2 74 aa13.83□□□□□ -0.2
PNKP-215ENST00000600910 IGIPA6NJ69 53 aa13.83□□□□□ -0.2
PNKP-215ENST00000600910 SCGB3A1Q96QR1 104 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms