RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 MGST1P10620 155 aaKnown RBP2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 RNASE3P12724 160 aaKnown RBP2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 SRIP30626 198 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 PPT1P50897 306 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 EIF5AP63241 154 aaKnown RBP2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 RHOHQ15669 191 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 LGALSLQ3ZCW2 172 aaPredicted RBP2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 AKR1C8PQ5T2L2 129 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 CFAP126Q5VTH2 177 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 DPPA3Q6W0C5 159 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZFP2Q6ZN57 461 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 OR4C5Q8NGB2 326 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 STOML3Q8TAV4 291 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 MBD3L1Q8WWY6 194 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 FMC1Q96HJ9 113 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 TXNDC17Q9BRA2 123 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 TPPP3Q9BW30 176 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 MAP1LC3BQ9GZQ8 125 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 IL36BQ9NZH7 164 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 RPH3ALQ9UNE2 315 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 DYNC1H1Q14204 4646 aaKnown RBP2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRAV1-1A0A0B4J248 108 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 LTAP01374 205 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 IFNA7P01567 189 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 S100A9P06702 114 aaKnown RBP2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 CXCL1P09341 107 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 LINC00694P0DN24 101 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 EVI2AP22794 236 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 CRIP1P50238 77 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 FGF8P55075 233 aaPredicted RBP2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 LINC00315P59091 139 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 LINC01556Q5JQF7 62 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 PRNTQ86SH4 94 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 Q86TA4 180 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 C10orf126Q8N4M7 172 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 C15orf54Q8N8G6 183 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 SLC25A29Q8N8R3 303 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 C20orf203Q8NBC4 194 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZC2HC1AQ96GY0 325 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 PRADC1Q9BSG0 188 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 NAGKQ9UJ70 344 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 LY96Q9Y6Y9 160 aa2.24□□□□□ -2.05
CKS1BP3-201ENST00000600888 KANTRA0A1W2PQU2 76 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 C16orf90A8MZG2 172 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 IBA57-AS1B1ANH7 110 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 B4DEV8 164 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 KRBOX1C9JBD0 128 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 SNAPINO95295 136 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 ARMS2P0C7Q2 107 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 TPT1P13693 172 aaKnown RBP2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 S100A4P26447 101 aaKnown RBP2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 CTRLP40313 264 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 ASIPP42127 132 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 AKR1C3P42330 323 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 RAB5CP51148 216 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 UBE2G2P60604 165 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 UBE2G1P62253 170 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 MAJINQ3KP22 176 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 FAM162BQ5T6X4 162 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 LELP1Q5T871 98 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 EIF5AL1Q6IS14 154 aaKnown RBP2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 SPATA12Q7Z6I5 190 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 WFDC10BQ8IUB3 73 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 ATP6V0E2Q8NHE4 81 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 SMIM12Q96EX1 92 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZNF471Q9BX82 626 aaPredicted RBP2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 GTSF1LQ9H1H1 148 aa2.23□□□□□ -2.05
CKS1BP3-201ENST00000600888 LRP1BQ9NZR2 4599 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 A0A087WTM6 91 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 A0A087WWC5 75 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRAV8-6A0A0B4J262 113 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRBV10-1A0A0K0K1A3 114 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 SMLR1H3BR10 107 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 TEX46H3BTG2 121 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 SNAI2O43623 268 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 SH2D1AO60880 128 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 CRYGDP07320 174 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 OR5AL1P0C617 328 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 SULT1A2P50226 295 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 TCTE3Q8IZS6 198 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 ZFP82Q8N141 532 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 FAM213BQ8TBF2 198 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 SFT2D1Q8WV19 159 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 SFRP2Q96HF1 295 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 CHCHD7Q9BUK0 85 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 MANBALQ9NQG1 85 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 KLK12Q9UKR0 248 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 PHLDA3Q9Y5J5 127 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 DNAH5Q8TE73 4624 aa2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
CKS1BP3-201ENST00000600888 TRBV7-3A0A075B6L6 115 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 IGHV3-73A0A0B4J1V6 119 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 GRIFINA4D1Z8 144 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 C19orf71A6NCJ1 209 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 LRCOL1A6NCL2 159 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 H0Y8G0 127 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 H3BVH4 76 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 M0R036 132 aa2.21□□□□□ -2.06
CKS1BP3-201ENST00000600888 PDE6DO43924 150 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms