RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 RHOHQ15669 191 aa13.99□□□□□ -0.17
IRF3-221ENST00000598808 LOC100131303A0A0U1RQF7 123 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 HBDP02042 147 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 MGPP08493 103 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 C3orf79P0CE67 100 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 ZNF56Q15929 161 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 MRPL23Q16540 153 aaKnown RBP13.98□□□□□ -0.17
IRF3-221ENST00000598808 ZFP2Q6ZN57 461 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 SLC25A29Q8N8R3 303 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 TMEM70Q9BUB7 260 aa13.98□□□□□ -0.17
IRF3-221ENST00000598808 MAP1LC3CQ9BXW4 147 aa13.97□□□□□ -0.17
IRF3-221ENST00000598808 IGLV2-18A0A075B6J9 118 aa13.96□□□□□ -0.17
IRF3-221ENST00000598808 C20orf202A1L168 122 aa13.96□□□□□ -0.17
IRF3-221ENST00000598808 K7EQD1 137 aa13.96□□□□□ -0.17
IRF3-221ENST00000598808 SUMO2P61956 95 aaKnown RBP13.96□□□□□ -0.17
IRF3-221ENST00000598808 PMCHL1Q16048 86 aa13.96□□□□□ -0.17
IRF3-221ENST00000598808 TRBV6-4A0A1B0GX49 114 aa13.95□□□□□ -0.18
IRF3-221ENST00000598808 F5H697 171 aa13.95□□□□□ -0.18
IRF3-221ENST00000598808 PET117Q6UWS5 81 aa13.95□□□□□ -0.18
IRF3-221ENST00000598808 TEX43Q6ZNM6 134 aa13.95□□□□□ -0.18
IRF3-221ENST00000598808 SMIM2Q9BVW6 85 aa13.95□□□□□ -0.18
IRF3-221ENST00000598808 TRAV26-2A0A0B4J265 109 aa13.94□□□□□ -0.18
IRF3-221ENST00000598808 FCER1GP30273 86 aa13.94□□□□□ -0.18
IRF3-221ENST00000598808 Q6ZSN1 163 aa13.94□□□□□ -0.18
IRF3-221ENST00000598808 SPATA12Q7Z6I5 190 aa13.94□□□□□ -0.18
IRF3-221ENST00000598808 TRBV6-5A0A0K0K1A5 114 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 LINC01549A6NIU2 74 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 H7C1H1 209 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 GAS8-AS1O95177 125 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 CRYGDP07320 174 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 G0S2P27469 103 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 PKIAP61925 76 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 LINC00588Q9Y4M8 146 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 KMT2AQ03164 3969 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 TSTD3H0UI37 97 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 LAGE3Q14657 143 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 ESRGQ1W209 222 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 ORMDL2Q53FV1 153 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 UFSP1Q6NVU6 142 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 NEGR1Q7Z3B1 354 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 Q8N976 141 aa13.93□□□□□ -0.18
IRF3-221ENST00000598808 GAGE12JA6NER3 117 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 SYS1-DBNDD2H3BUS1 97 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 GAGE1Q13065 139 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 GAGE4Q13068 117 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 GAGE5Q13069 117 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 GAGE13Q4V321 117 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 SUMO4Q6EEV6 95 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 CDPF1Q6NVV7 123 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 ST20Q9HBF5 79 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 VPS13DQ5THJ4 4388 aa13.92□□□□□ -0.18
IRF3-221ENST00000598808 A0A096LNJ9 63 aa13.91□□□□□ -0.18
IRF3-221ENST00000598808 TCAPO15273 167 aa13.91□□□□□ -0.18
IRF3-221ENST00000598808 VAMP8Q9BV40 100 aa13.89□□□□□ -0.19
IRF3-221ENST00000598808 M0QY20 66 aa13.88□□□□□ -0.19
IRF3-221ENST00000598808 M0R2N4 97 aa13.88□□□□□ -0.19
IRF3-221ENST00000598808 VCYO14598 125 aa13.88□□□□□ -0.19
IRF3-221ENST00000598808 SH2D6Q7Z4S9 175 aa13.88□□□□□ -0.19
IRF3-221ENST00000598808 PCP4L1A6NKN8 68 aa13.87□□□□□ -0.19
IRF3-221ENST00000598808 ATP5LO75964 103 aa13.87□□□□□ -0.19
IRF3-221ENST00000598808 LYPD5Q6UWN5 251 aa13.87□□□□□ -0.19
IRF3-221ENST00000598808 RPL39LQ96EH5 51 aaKnown RBP13.87□□□□□ -0.19
IRF3-221ENST00000598808 MRPS16Q9Y3D3 137 aaKnown RBP13.87□□□□□ -0.19
IRF3-221ENST00000598808 POLR2KP53803 58 aaKnown RBP13.87□□□□□ -0.19
IRF3-221ENST00000598808 DNAH6Q9C0G6 4158 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 TRBV27A0A0K0K1C4 114 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 RPL36AP83881 106 aaKnown RBP13.86□□□□□ -0.19
IRF3-221ENST00000598808 LINC01545Q5VT33 79 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 ZNF664Q8N3J9 261 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 ATP6V0E2Q8NHE4 81 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 ZNRF2Q8NHG8 242 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 RPL36ALQ969Q0 106 aaKnown RBP13.86□□□□□ -0.19
IRF3-221ENST00000598808 IFI27L1Q96BM0 104 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 Q9UF83 564 aa13.86□□□□□ -0.19
IRF3-221ENST00000598808 LINC00173Q6ZV60 143 aa13.85□□□□□ -0.19
IRF3-221ENST00000598808 KIR2DL4Q99706 377 aa13.85□□□□□ -0.19
IRF3-221ENST00000598808 TRBV10-1A0A0K0K1A3 114 aa13.83□□□□□ -0.2
IRF3-221ENST00000598808 DNAJC30Q96LL9 226 aa13.83□□□□□ -0.2
IRF3-221ENST00000598808 Q9H8V8 135 aa13.83□□□□□ -0.2
IRF3-221ENST00000598808 EPPK1P58107 5090 aaKnown RBP13.82□□□□□ -0.2
IRF3-221ENST00000598808 TRAV9-2A0A087WT02 112 aa13.82□□□□□ -0.2
IRF3-221ENST00000598808 SDHAF1A6NFY7 115 aa13.82□□□□□ -0.2
IRF3-221ENST00000598808 TOMM6Q96B49 74 aa13.81□□□□□ -0.2
IRF3-221ENST00000598808 UPK3BQ9BT76 320 aa13.81□□□□□ -0.2
IRF3-221ENST00000598808 GTSF1LQ9H1H1 148 aa13.81□□□□□ -0.2
IRF3-221ENST00000598808 TRBV7-3A0A075B6L6 115 aa13.8□□□□□ -0.2
IRF3-221ENST00000598808 NEXN-AS1Q8NBZ9 246 aa13.8□□□□□ -0.2
IRF3-221ENST00000598808 SIVA1O15304 175 aa13.8□□□□□ -0.2
IRF3-221ENST00000598808 TNFRSF18Q9Y5U5 241 aa13.8□□□□□ -0.2
IRF3-221ENST00000598808 TRAV8-6A0A0B4J262 113 aa13.79□□□□□ -0.2
IRF3-221ENST00000598808 IGHV3-38A0A0C4DH36 116 aa13.79□□□□□ -0.2
IRF3-221ENST00000598808 HSBP1L1C9JCN9 74 aa13.79□□□□□ -0.2
IRF3-221ENST00000598808 LINC00694P0DN24 101 aa13.79□□□□□ -0.2
IRF3-221ENST00000598808 WFDC10BQ8IUB3 73 aa13.79□□□□□ -0.2
IRF3-221ENST00000598808 NBDYA0A0U1RRE5 68 aa13.78□□□□□ -0.2
IRF3-221ENST00000598808 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.78□□□□□ -0.2
IRF3-221ENST00000598808 I3L3M4 83 aa13.78□□□□□ -0.2
IRF3-221ENST00000598808 DDTP30046 118 aa13.78□□□□□ -0.2
IRF3-221ENST00000598808 PRO1933Q9H354 126 aa13.78□□□□□ -0.2
IRF3-221ENST00000598808 CYSLTR1Q9Y271 337 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms