RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 TEX46H3BTG2 121 aa14.43□□□□□ -0.1
SSBP4-203ENST00000593641 AMTP48728 403 aa14.43□□□□□ -0.1
SSBP4-203ENST00000593641 SULT1A2P50226 295 aa14.43□□□□□ -0.1
SSBP4-203ENST00000593641 CCL20P78556 96 aa14.43□□□□□ -0.1
SSBP4-203ENST00000593641 COTL1Q14019 142 aa14.43□□□□□ -0.1
SSBP4-203ENST00000593641 IFNA1P01562 189 aa14.42□□□□□ -0.1
SSBP4-203ENST00000593641 A0A087WYN8 130 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 TRAV1-1A0A0B4J248 108 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 RAB19A4D1S5 217 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 SLPIP03973 132 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 CHTF8P0CG12 524 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 LYZL1Q6UWQ5 148 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 SPACA4Q8TDM5 124 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 BIN3Q9NQY0 253 aa14.41□□□□□ -0.1
SSBP4-203ENST00000593641 MT1HL1P0DM35 61 aa14.4□□□□□ -0.1
SSBP4-203ENST00000593641 NTF3P20783 257 aa14.4□□□□□ -0.1
SSBP4-203ENST00000593641 CFAP161Q6P656 301 aa14.4□□□□□ -0.1
SSBP4-203ENST00000593641 PDE6DO43924 150 aa14.39□□□□□ -0.11
SSBP4-203ENST00000593641 MEF2BQ02080 365 aaPredicted RBP14.39□□□□□ -0.11
SSBP4-203ENST00000593641 IGKV3OR2-268A0A0C4DH90 116 aa14.37□□□□□ -0.11
SSBP4-203ENST00000593641 GAGE12HA6NDE8 117 aa14.37□□□□□ -0.11
SSBP4-203ENST00000593641 EIF5AL1Q6IS14 154 aaKnown RBP14.37□□□□□ -0.11
SSBP4-203ENST00000593641 C7orf33Q8WU49 177 aa14.37□□□□□ -0.11
SSBP4-203ENST00000593641 MED9Q9NWA0 146 aa14.37□□□□□ -0.11
SSBP4-203ENST00000593641 CTRLP40313 264 aa14.36□□□□□ -0.11
SSBP4-203ENST00000593641 TWIST1Q15672 202 aa14.36□□□□□ -0.11
SSBP4-203ENST00000593641 C9orf62Q8N4C0 152 aa14.36□□□□□ -0.11
SSBP4-203ENST00000593641 C15orf56Q8N910 161 aa14.36□□□□□ -0.11
SSBP4-203ENST00000593641 TRBV20OR9-2A0A075B6H5 130 aa14.35□□□□□ -0.11
SSBP4-203ENST00000593641 AMMECR1LQ6DCA0 310 aa14.35□□□□□ -0.11
SSBP4-203ENST00000593641 PLAC8Q9NZF1 115 aa14.35□□□□□ -0.11
SSBP4-203ENST00000593641 PHOX2AO14813 284 aa14.34□□□□□ -0.11
SSBP4-203ENST00000593641 RPS10P46783 165 aaKnown RBP14.34□□□□□ -0.11
SSBP4-203ENST00000593641 COX6A2Q02221 97 aa14.34□□□□□ -0.11
SSBP4-203ENST00000593641 HIGD2BQ4VC39 106 aa14.33□□□□□ -0.12
SSBP4-203ENST00000593641 TNXBP22105 4242 aa14.32□□□□□ -0.12
SSBP4-203ENST00000593641 TRAV26-2A0A0B4J265 109 aa14.32□□□□□ -0.12
SSBP4-203ENST00000593641 NDUFS6O75380 124 aaKnown RBP14.32□□□□□ -0.12
SSBP4-203ENST00000593641 BCL2P10415 239 aa14.32□□□□□ -0.12
SSBP4-203ENST00000593641 GATD1Q8NB37 220 aa14.32□□□□□ -0.12
SSBP4-203ENST00000593641 NUDT10Q8NFP7 164 aa14.32□□□□□ -0.12
SSBP4-203ENST00000593641 NUDT11Q96G61 164 aa14.32□□□□□ -0.12
SSBP4-203ENST00000593641 CNFNQ9BYD5 112 aa14.32□□□□□ -0.12
SSBP4-203ENST00000593641 MAJINQ3KP22 176 aa14.31□□□□□ -0.12
SSBP4-203ENST00000593641 CHCHD10Q8WYQ3 142 aaPredicted RBP14.31□□□□□ -0.12
SSBP4-203ENST00000593641 RPP21Q9H633 154 aaKnown RBP14.31□□□□□ -0.12
SSBP4-203ENST00000593641 IGKV2-24A0A0C4DH68 120 aa14.3□□□□□ -0.12
SSBP4-203ENST00000593641 NCR2O95944 276 aa14.3□□□□□ -0.12
SSBP4-203ENST00000593641 APCSP02743 223 aa14.3□□□□□ -0.12
SSBP4-203ENST00000593641 RNASEKQ6P5S7 137 aaKnown RBP14.3□□□□□ -0.12
SSBP4-203ENST00000593641 SMIM15Q7Z3B0 74 aa14.3□□□□□ -0.12
SSBP4-203ENST00000593641 Q6ZNX1 250 aa14.29□□□□□ -0.12
SSBP4-203ENST00000593641 GTSF1Q8WW33 167 aa14.29□□□□□ -0.12
SSBP4-203ENST00000593641 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.28□□□□□ -0.12
SSBP4-203ENST00000593641 IGKV2-29A2NJV5 120 aaPredicted RBP14.28□□□□□ -0.12
SSBP4-203ENST00000593641 H7C423 109 aa14.28□□□□□ -0.12
SSBP4-203ENST00000593641 PRSS3P2Q8NHM4 247 aa14.28□□□□□ -0.12
SSBP4-203ENST00000593641 RPL39LQ96EH5 51 aaKnown RBP14.28□□□□□ -0.12
SSBP4-203ENST00000593641 RNASE7Q9H1E1 156 aaKnown RBP14.28□□□□□ -0.12
SSBP4-203ENST00000593641 GVQW2A0A096LPI5 108 aaPredicted RBP14.27□□□□□ -0.13
SSBP4-203ENST00000593641 TAGLN2P37802 199 aaKnown RBP14.27□□□□□ -0.13
SSBP4-203ENST00000593641 FGF6P10767 208 aa14.26□□□□□ -0.13
SSBP4-203ENST00000593641 TEX261Q6UWH6 196 aa14.26□□□□□ -0.13
SSBP4-203ENST00000593641 STPG4Q8N801 248 aa14.26□□□□□ -0.13
SSBP4-203ENST00000593641 LRP2P98164 4655 aa14.24□□□□□ -0.13
SSBP4-203ENST00000593641 SDHAF1A6NFY7 115 aa14.24□□□□□ -0.13
SSBP4-203ENST00000593641 ZNF25P17030 456 aaPredicted RBP14.24□□□□□ -0.13
SSBP4-203ENST00000593641 PRR3P79522 188 aaKnown RBP14.24□□□□□ -0.13
SSBP4-203ENST00000593641 BTF3L4Q96K17 158 aa14.24□□□□□ -0.13
SSBP4-203ENST00000593641 PKIGQ9Y2B9 76 aa14.24□□□□□ -0.13
SSBP4-203ENST00000593641 K7EN84 100 aa14.23□□□□□ -0.13
SSBP4-203ENST00000593641 LYPD6BQ8NI32 183 aa14.23□□□□□ -0.13
SSBP4-203ENST00000593641 OCC1Q8TAD7 63 aa14.23□□□□□ -0.13
SSBP4-203ENST00000593641 TMEM101Q96IK0 257 aa14.23□□□□□ -0.13
SSBP4-203ENST00000593641 FOXI1Q12951 378 aa14.22□□□□□ -0.13
SSBP4-203ENST00000593641 OR5A1Q8NGJ0 315 aa14.22□□□□□ -0.13
SSBP4-203ENST00000593641 LINC00474Q9P2X8 69 aa14.22□□□□□ -0.13
SSBP4-203ENST00000593641 A0A096LNI7 61 aa14.21□□□□□ -0.13
SSBP4-203ENST00000593641 I3L3M4 83 aa14.21□□□□□ -0.13
SSBP4-203ENST00000593641 PMCHP20382 165 aa14.21□□□□□ -0.13
SSBP4-203ENST00000593641 XCL1P47992 114 aa14.21□□□□□ -0.13
SSBP4-203ENST00000593641 FOXA3P55318 350 aaPredicted RBP14.21□□□□□ -0.13
SSBP4-203ENST00000593641 SLC51BQ86UW2 128 aa14.2□□□□□ -0.14
SSBP4-203ENST00000593641 LINC01600Q96MT4 127 aa14.2□□□□□ -0.14
SSBP4-203ENST00000593641 IGHV1-58A0A0C4DH39 117 aa14.18□□□□□ -0.14
SSBP4-203ENST00000593641 GATCO43716 136 aaKnown RBP14.18□□□□□ -0.14
SSBP4-203ENST00000593641 LINC00959A0A1B0GUT2 108 aa14.17□□□□□ -0.14
SSBP4-203ENST00000593641 CCL25O15444 150 aa14.17□□□□□ -0.14
SSBP4-203ENST00000593641 BORCS7Q96B45 105 aa14.17□□□□□ -0.14
SSBP4-203ENST00000593641 MRAP2Q96G30 205 aa14.17□□□□□ -0.14
SSBP4-203ENST00000593641 CARD19Q96LW7 228 aa14.17□□□□□ -0.14
SSBP4-203ENST00000593641 TRBV6-5A0A0K0K1A5 114 aa14.16□□□□□ -0.14
SSBP4-203ENST00000593641 A8MWL6 223 aa14.16□□□□□ -0.14
SSBP4-203ENST00000593641 RNF213Q63HN8 5207 aa14.15□□□□□ -0.14
SSBP4-203ENST00000593641 FAM231BA6NCW3 169 aa14.15□□□□□ -0.14
SSBP4-203ENST00000593641 SS18Q15532 418 aa14.15□□□□□ -0.14
SSBP4-203ENST00000593641 LINC00526Q96FQ7 95 aa14.15□□□□□ -0.14
SSBP4-203ENST00000593641 FAM210AQ96ND0 272 aa14.15□□□□□ -0.14
SSBP4-203ENST00000593641 ST20Q9HBF5 79 aa14.15□□□□□ -0.14
SSBP4-203ENST00000593641 ZNF561-AS1K7EIQ3 104 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms