RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 CTRLP40313 264 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 RBX1P62877 108 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 CACNG7P62955 275 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 MIAQ16674 131 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 SUMO4Q6EEV6 95 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 LINC00269Q8N2A0 174 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 PGLYRP4Q96LB8 373 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
CAPNS1-213ENST00000592354 A8MWL6 223 aa8.75□□□□□ -1.01
CAPNS1-213ENST00000592354 F2Z2F3 143 aa8.75□□□□□ -1.01
CAPNS1-213ENST00000592354 NTF3P20783 257 aa8.75□□□□□ -1.01
CAPNS1-213ENST00000592354 PKIAP61925 76 aa8.75□□□□□ -1.01
CAPNS1-213ENST00000592354 V9GYV3 84 aa8.75□□□□□ -1.01
CAPNS1-213ENST00000592354 KRTAP29-1A8MX34 341 aaPredicted RBP8.74□□□□□ -1.01
CAPNS1-213ENST00000592354 PRSS1P07477 247 aa8.74□□□□□ -1.01
CAPNS1-213ENST00000592354 TWIST1Q15672 202 aa8.74□□□□□ -1.01
CAPNS1-213ENST00000592354 TMEM97Q5BJF2 176 aa8.74□□□□□ -1.01
CAPNS1-213ENST00000592354 CT83Q5H943 113 aa8.74□□□□□ -1.01
CAPNS1-213ENST00000592354 PRR34Q9NV39 138 aa8.74□□□□□ -1.01
CAPNS1-213ENST00000592354 IGLV10-54A0A075B6I4 117 aa8.73□□□□□ -1.01
CAPNS1-213ENST00000592354 IGHV1-24A0A0C4DH33 117 aa8.73□□□□□ -1.01
CAPNS1-213ENST00000592354 M0QY20 66 aa8.73□□□□□ -1.01
CAPNS1-213ENST00000592354 IQCJQ1A5X6 159 aa8.73□□□□□ -1.01
CAPNS1-213ENST00000592354 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
CAPNS1-213ENST00000592354 COMMD7Q86VX2 200 aa8.73□□□□□ -1.01
CAPNS1-213ENST00000592354 TSKUQ8WUA8 353 aa8.73□□□□□ -1.01
CAPNS1-213ENST00000592354 HIGD1CA8MV81 97 aa8.72□□□□□ -1.01
CAPNS1-213ENST00000592354 H7C1H1 209 aa8.72□□□□□ -1.01
CAPNS1-213ENST00000592354 FOXA3P55318 350 aaPredicted RBP8.72□□□□□ -1.01
CAPNS1-213ENST00000592354 CNFNQ9BYD5 112 aa8.72□□□□□ -1.01
CAPNS1-213ENST00000592354 TRGC1P0CF51 173 aa8.71□□□□□ -1.02
CAPNS1-213ENST00000592354 ADCYAP1P18509 176 aa8.71□□□□□ -1.02
CAPNS1-213ENST00000592354 REG3AQ06141 175 aa8.71□□□□□ -1.02
CAPNS1-213ENST00000592354 WDR73Q6P4I2 378 aa8.71□□□□□ -1.02
CAPNS1-213ENST00000592354 PANO1I0J062 215 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 RPL37AP61513 92 aaKnown RBP8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 RASL11AQ6T310 242 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 UQCC3Q6UW78 93 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 C20orf203Q8NBC4 194 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 BORCS7Q96B45 105 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 TMEM243Q9BU79 118 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 GFRA4Q9GZZ7 299 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 DPH3P1Q9H4G8 78 aa8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
CAPNS1-213ENST00000592354 IGLV4-60A0A075B6I1 120 aa8.69□□□□□ -1.02
CAPNS1-213ENST00000592354 TMEM218A2RU14 115 aa8.69□□□□□ -1.02
CAPNS1-213ENST00000592354 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
CAPNS1-213ENST00000592354 NUP35Q8NFH5 326 aa8.69□□□□□ -1.02
CAPNS1-213ENST00000592354 TRAV26-2A0A0B4J265 109 aa8.68□□□□□ -1.02
CAPNS1-213ENST00000592354 A0A1B0GUT8 65 aa8.68□□□□□ -1.02
CAPNS1-213ENST00000592354 LINC00862A6NCI5 91 aa8.68□□□□□ -1.02
CAPNS1-213ENST00000592354 F8W036 122 aa8.68□□□□□ -1.02
CAPNS1-213ENST00000592354 DGAT2L7PQ6IED9 249 aa8.68□□□□□ -1.02
CAPNS1-213ENST00000592354 NAT8BQ9UHF3 227 aa8.68□□□□□ -1.02
CAPNS1-213ENST00000592354 SMIM27A0A1W2PRY6 76 aa8.67□□□□□ -1.02
CAPNS1-213ENST00000592354 hDV102S1A0JD36 115 aa8.67□□□□□ -1.02
CAPNS1-213ENST00000592354 FAM231BA6NCW3 169 aa8.67□□□□□ -1.02
CAPNS1-213ENST00000592354 UBE2L6O14933 153 aa8.67□□□□□ -1.02
CAPNS1-213ENST00000592354 AMTP48728 403 aa8.67□□□□□ -1.02
CAPNS1-213ENST00000592354 HNRNPA3P51991 378 aaKnown RBP8.67□□□□□ -1.02
CAPNS1-213ENST00000592354 NIT2Q9NQR4 276 aa8.67□□□□□ -1.02
CAPNS1-213ENST00000592354 PNRC1Q12796 327 aaPredicted RBP8.66□□□□□ -1.02
CAPNS1-213ENST00000592354 SMIM15Q7Z3B0 74 aa8.66□□□□□ -1.02
CAPNS1-213ENST00000592354 RIGQ13278 110 aa8.65□□□□□ -1.02
CAPNS1-213ENST00000592354 COTL1Q14019 142 aa8.65□□□□□ -1.02
CAPNS1-213ENST00000592354 GATD1Q8NB37 220 aa8.65□□□□□ -1.02
CAPNS1-213ENST00000592354 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 IGKV3OR2-268A0A0C4DH90 116 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 GAS8-AS1O95177 125 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 MT-ND4LP03901 98 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 MRPL54Q6P161 138 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 SDIM1Q6ZPB5 146 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 AMN1Q8IY45 258 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 CLRN3Q8NCR9 226 aa8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 RPL39LQ96EH5 51 aaKnown RBP8.64□□□□□ -1.03
CAPNS1-213ENST00000592354 FAT3Q8TDW7 4589 aa8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 OXTP01178 125 aa8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 CHTF8P0CG12 524 aa8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 CAMPP49913 170 aa8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 CNBPP62633 177 aaKnown RBP8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 RNF185Q96GF1 192 aa8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 SEC11CQ9BY50 192 aa8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 TMEM191AQ9H0A3 160 aa8.63□□□□□ -1.03
CAPNS1-213ENST00000592354 GAGE12HA6NDE8 117 aa8.62□□□□□ -1.03
CAPNS1-213ENST00000592354 SMKR1H3BMG3 65 aa8.62□□□□□ -1.03
CAPNS1-213ENST00000592354 SLPIP03973 132 aa8.62□□□□□ -1.03
CAPNS1-213ENST00000592354 ANAPC16Q96DE5 110 aa8.62□□□□□ -1.03
CAPNS1-213ENST00000592354 AP5S1Q9NUS5 200 aa8.62□□□□□ -1.03
CAPNS1-213ENST00000592354 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
CAPNS1-213ENST00000592354 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.61□□□□□ -1.03
CAPNS1-213ENST00000592354 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
CAPNS1-213ENST00000592354 IGKV2-29A2NJV5 120 aaPredicted RBP8.61□□□□□ -1.03
CAPNS1-213ENST00000592354 NCR2O95944 276 aa8.61□□□□□ -1.03
CAPNS1-213ENST00000592354 RAB4AP20338 218 aa8.61□□□□□ -1.03
CAPNS1-213ENST00000592354 C15orf56Q8N910 161 aa8.61□□□□□ -1.03
CAPNS1-213ENST00000592354 A0A1B0GXF2 115 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms