RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 PRKDCP78527 4128 aaKnown RBP12.25□□□□□ -0.45
CXXC1-212ENST00000589940 F5H768 121 aa12.25□□□□□ -0.45
CXXC1-212ENST00000589940 DEFA6Q01524 100 aa12.25□□□□□ -0.45
CXXC1-212ENST00000589940 C11orf45Q8TAV5 145 aa12.25□□□□□ -0.45
CXXC1-212ENST00000589940 HTN3P15516 51 aa12.24□□□□□ -0.45
CXXC1-212ENST00000589940 DAZ4Q86SG3 579 aaKnown RBP12.24□□□□□ -0.45
CXXC1-212ENST00000589940 PHLDA1Q8WV24 401 aaPredicted RBP12.24□□□□□ -0.45
CXXC1-212ENST00000589940 DAZ3Q9NR90 486 aaKnown RBP12.24□□□□□ -0.45
CXXC1-212ENST00000589940 IGHV3-38A0A0C4DH36 116 aa12.23□□□□□ -0.45
CXXC1-212ENST00000589940 PAX4O43316 350 aa12.23□□□□□ -0.45
CXXC1-212ENST00000589940 BTF3P20290 206 aaKnown RBP12.23□□□□□ -0.45
CXXC1-212ENST00000589940 LINC00694P0DN24 101 aa12.23□□□□□ -0.45
CXXC1-212ENST00000589940 GYPEP15421 78 aa12.23□□□□□ -0.45
CXXC1-212ENST00000589940 Q6ZTC4 211 aa12.23□□□□□ -0.45
CXXC1-212ENST00000589940 HSPB8Q9UJY1 196 aa12.22□□□□□ -0.45
CXXC1-212ENST00000589940 G0S2P27469 103 aa12.22□□□□□ -0.45
CXXC1-212ENST00000589940 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
CXXC1-212ENST00000589940 COTL1Q14019 142 aa12.22□□□□□ -0.45
CXXC1-212ENST00000589940 VSIG2Q96IQ7 327 aa12.22□□□□□ -0.45
CXXC1-212ENST00000589940 TRAV26-1A0A087WT03 109 aa12.21□□□□□ -0.45
CXXC1-212ENST00000589940 LINC00173Q6ZV60 143 aa12.21□□□□□ -0.45
CXXC1-212ENST00000589940 A0A0J9YY99 117 aa12.21□□□□□ -0.46
CXXC1-212ENST00000589940 C2orf66Q6UXQ4 117 aa12.21□□□□□ -0.46
CXXC1-212ENST00000589940 TOMM6Q96B49 74 aa12.21□□□□□ -0.46
CXXC1-212ENST00000589940 STAB2Q8WWQ8 2551 aa12.2□□□□□ -0.46
CXXC1-212ENST00000589940 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
CXXC1-212ENST00000589940 CYSLTR1Q9Y271 337 aa12.19□□□□□ -0.46
CXXC1-212ENST00000589940 KRTDAPP60985 99 aa12.19□□□□□ -0.46
CXXC1-212ENST00000589940 LINC01549A6NIU2 74 aa12.18□□□□□ -0.46
CXXC1-212ENST00000589940 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
CXXC1-212ENST00000589940 C20orf203Q8NBC4 194 aa12.18□□□□□ -0.46
CXXC1-212ENST00000589940 RPL39P62891 51 aaKnown RBP12.17□□□□□ -0.46
CXXC1-212ENST00000589940 CHCHD7Q9BUK0 85 aa12.17□□□□□ -0.46
CXXC1-212ENST00000589940 MAP1LC3CQ9BXW4 147 aa12.17□□□□□ -0.46
CXXC1-212ENST00000589940 GTSF1LQ9H1H1 148 aa12.17□□□□□ -0.46
CXXC1-212ENST00000589940 ATP6V0E2Q8NHE4 81 aa12.17□□□□□ -0.46
CXXC1-212ENST00000589940 IFI27L1Q96BM0 104 aa12.17□□□□□ -0.46
CXXC1-212ENST00000589940 ATP5LO75964 103 aa12.16□□□□□ -0.46
CXXC1-212ENST00000589940 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
CXXC1-212ENST00000589940 SCGB3A1Q96QR1 104 aa12.16□□□□□ -0.46
CXXC1-212ENST00000589940 DEFB131BA0A096LNP1 70 aa12.15□□□□□ -0.46
CXXC1-212ENST00000589940 H3BNG1 76 aa12.15□□□□□ -0.46
CXXC1-212ENST00000589940 JOSD1Q15040 202 aaPredicted RBP12.15□□□□□ -0.46
CXXC1-212ENST00000589940 PYY3Q5JQD4 70 aa12.15□□□□□ -0.46
CXXC1-212ENST00000589940 SYS1-DBNDD2H3BUS1 97 aa12.14□□□□□ -0.47
CXXC1-212ENST00000589940 MRPL23Q16540 153 aaKnown RBP12.14□□□□□ -0.47
CXXC1-212ENST00000589940 TMEM97Q5BJF2 176 aa12.14□□□□□ -0.47
CXXC1-212ENST00000589940 ERASQ7Z444 233 aa12.14□□□□□ -0.47
CXXC1-212ENST00000589940 ICOSQ9Y6W8 199 aa12.14□□□□□ -0.47
CXXC1-212ENST00000589940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.14□□□□□ -0.47
CXXC1-212ENST00000589940 TRAV10A0A0B4J240 114 aa12.13□□□□□ -0.47
CXXC1-212ENST00000589940 A0A1B0GV90 55 aa12.13□□□□□ -0.47
CXXC1-212ENST00000589940 IGIPA6NJ69 53 aa12.13□□□□□ -0.47
CXXC1-212ENST00000589940 A0A096LPF7 62 aa12.13□□□□□ -0.47
CXXC1-212ENST00000589940 SH2D6Q7Z4S9 175 aa12.13□□□□□ -0.47
CXXC1-212ENST00000589940 C14orf144Q96I85 54 aa12.13□□□□□ -0.47
CXXC1-212ENST00000589940 TIMM17AQ99595 171 aa12.13□□□□□ -0.47
CXXC1-212ENST00000589940 TRBV25-1A0A075B6N4 114 aa12.12□□□□□ -0.47
CXXC1-212ENST00000589940 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.12□□□□□ -0.47
CXXC1-212ENST00000589940 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
CXXC1-212ENST00000589940 IGKV2-29A2NJV5 120 aaPredicted RBP12.12□□□□□ -0.47
CXXC1-212ENST00000589940 SCGB1D1O95968 90 aa12.12□□□□□ -0.47
CXXC1-212ENST00000589940 SPATA12Q7Z6I5 190 aa12.12□□□□□ -0.47
CXXC1-212ENST00000589940 H0Y8G0 127 aa12.11□□□□□ -0.47
CXXC1-212ENST00000589940 PET117Q6UWS5 81 aa12.11□□□□□ -0.47
CXXC1-212ENST00000589940 TMEM141Q96I45 108 aa12.11□□□□□ -0.47
CXXC1-212ENST00000589940 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
CXXC1-212ENST00000589940 Q6ZN92 141 aa12.1□□□□□ -0.47
CXXC1-212ENST00000589940 Q8N976 141 aa12.1□□□□□ -0.47
CXXC1-212ENST00000589940 PYGO1Q9Y3Y4 419 aa12.1□□□□□ -0.47
CXXC1-212ENST00000589940 PRSS1P07477 247 aa12.1□□□□□ -0.47
CXXC1-212ENST00000589940 FBN3Q75N90 2809 aa12.09□□□□□ -0.47
CXXC1-212ENST00000589940 SPANXA1Q9NS26 97 aa12.09□□□□□ -0.47
CXXC1-212ENST00000589940 UBE2D4Q9Y2X8 147 aa12.09□□□□□ -0.47
CXXC1-212ENST00000589940 C20orf202A1L168 122 aa12.08□□□□□ -0.48
CXXC1-212ENST00000589940 LINC01545Q5VT33 79 aa12.08□□□□□ -0.48
CXXC1-212ENST00000589940 CDPF1Q6NVV7 123 aa12.08□□□□□ -0.48
CXXC1-212ENST00000589940 BAALCQ8WXS3 180 aa12.08□□□□□ -0.48
CXXC1-212ENST00000589940 H7C423 109 aa12.07□□□□□ -0.48
CXXC1-212ENST00000589940 UBE2L6O14933 153 aa12.07□□□□□ -0.48
CXXC1-212ENST00000589940 TIMM21Q9BVV7 248 aa12.07□□□□□ -0.48
CXXC1-212ENST00000589940 NPSP0C0P6 89 aa12.07□□□□□ -0.48
CXXC1-212ENST00000589940 CEMP1Q6PRD7 247 aaPredicted RBP12.07□□□□□ -0.48
CXXC1-212ENST00000589940 IGLV4-3A0A075B6K6 122 aa12.06□□□□□ -0.48
CXXC1-212ENST00000589940 FGF6P10767 208 aa12.06□□□□□ -0.48
CXXC1-212ENST00000589940 SMAGPQ0VAQ4 97 aa12.06□□□□□ -0.48
CXXC1-212ENST00000589940 LGALS9CQ6DKI2 356 aa12.06□□□□□ -0.48
CXXC1-212ENST00000589940 MRPL52Q86TS9 123 aaKnown RBP12.06□□□□□ -0.48
CXXC1-212ENST00000589940 OPRPNQ99935 248 aaPredicted RBP12.06□□□□□ -0.48
CXXC1-212ENST00000589940 CHCHD5Q9BSY4 110 aa12.06□□□□□ -0.48
CXXC1-212ENST00000589940 TRAV12-1A0A0B4J245 112 aa12.06□□□□□ -0.48
CXXC1-212ENST00000589940 PAPPA-AS1Q5QFB9 102 aa12.05□□□□□ -0.48
CXXC1-212ENST00000589940 DDTP30046 118 aa12.05□□□□□ -0.48
CXXC1-212ENST00000589940 ODF1Q14990 250 aa12.05□□□□□ -0.48
CXXC1-212ENST00000589940 FAM104AQ969W3 186 aa12.05□□□□□ -0.48
CXXC1-212ENST00000589940 PMCHL2Q9BQD1 86 aa12.05□□□□□ -0.48
CXXC1-212ENST00000589940 CSDC2Q9Y534 153 aaKnown RBP12.05□□□□□ -0.48
CXXC1-212ENST00000589940 TIRAPP58753 221 aa12.04□□□□□ -0.48
CXXC1-212ENST00000589940 PKIAP61925 76 aa12.04□□□□□ -0.48
CXXC1-212ENST00000589940 PMVKQ15126 192 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms