RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 COTL1Q14019 142 aa10.68□□□□□ -0.7
LINC01842-201ENST00000588275 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
LINC01842-201ENST00000588275 NIT2Q9NQR4 276 aa10.68□□□□□ -0.7
LINC01842-201ENST00000588275 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
LINC01842-201ENST00000588275 HMSDA8MTL9 139 aa10.67□□□□□ -0.7
LINC01842-201ENST00000588275 IFNA1P01562 189 aa10.67□□□□□ -0.7
LINC01842-201ENST00000588275 LYZL1Q6UWQ5 148 aa10.67□□□□□ -0.7
LINC01842-201ENST00000588275 SPACA4Q8TDM5 124 aa10.67□□□□□ -0.7
LINC01842-201ENST00000588275 RNF185Q96GF1 192 aa10.67□□□□□ -0.7
LINC01842-201ENST00000588275 PGLYRP4Q96LB8 373 aa10.67□□□□□ -0.7
LINC01842-201ENST00000588275 GAGE12HA6NDE8 117 aa10.66□□□□□ -0.7
LINC01842-201ENST00000588275 F2Z2F3 143 aa10.66□□□□□ -0.7
LINC01842-201ENST00000588275 PHOX2AO14813 284 aa10.66□□□□□ -0.7
LINC01842-201ENST00000588275 NTF3P20783 257 aa10.66□□□□□ -0.7
LINC01842-201ENST00000588275 HIGD2BQ4VC39 106 aa10.66□□□□□ -0.7
LINC01842-201ENST00000588275 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
LINC01842-201ENST00000588275 C7orf33Q8WU49 177 aa10.65□□□□□ -0.7
LINC01842-201ENST00000588275 IGKV2-24A0A0C4DH68 120 aa10.64□□□□□ -0.71
LINC01842-201ENST00000588275 COX6A2Q02221 97 aa10.64□□□□□ -0.71
LINC01842-201ENST00000588275 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
LINC01842-201ENST00000588275 TNXBP22105 4242 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 TRAV26-2A0A0B4J265 109 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 TWIST1Q15672 202 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 MAJINQ3KP22 176 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 AMMECR1LQ6DCA0 310 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 SMIM12Q96EX1 92 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 MED9Q9NWA0 146 aa10.63□□□□□ -0.71
LINC01842-201ENST00000588275 RPS10P46783 165 aaKnown RBP10.62□□□□□ -0.71
LINC01842-201ENST00000588275 MEF2BQ02080 365 aaPredicted RBP10.62□□□□□ -0.71
LINC01842-201ENST00000588275 RNASEKQ6P5S7 137 aaKnown RBP10.62□□□□□ -0.71
LINC01842-201ENST00000588275 PLAC8Q9NZF1 115 aa10.62□□□□□ -0.71
LINC01842-201ENST00000588275 TRBV20OR9-2A0A075B6H5 130 aa10.61□□□□□ -0.71
LINC01842-201ENST00000588275 TRAV1-1A0A0B4J248 108 aa10.61□□□□□ -0.71
LINC01842-201ENST00000588275 PDE6DO43924 150 aa10.61□□□□□ -0.71
LINC01842-201ENST00000588275 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
LINC01842-201ENST00000588275 BIN3Q9NQY0 253 aa10.61□□□□□ -0.71
LINC01842-201ENST00000588275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.6□□□□□ -0.71
LINC01842-201ENST00000588275 IGKV2-29A2NJV5 120 aaPredicted RBP10.6□□□□□ -0.71
LINC01842-201ENST00000588275 NDUFS6O75380 124 aaKnown RBP10.6□□□□□ -0.71
LINC01842-201ENST00000588275 CTRLP40313 264 aa10.6□□□□□ -0.71
LINC01842-201ENST00000588275 Q6ZNX1 250 aa10.6□□□□□ -0.71
LINC01842-201ENST00000588275 GATD1Q8NB37 220 aa10.6□□□□□ -0.71
LINC01842-201ENST00000588275 NUDT10Q8NFP7 164 aa10.6□□□□□ -0.71
LINC01842-201ENST00000588275 LYPD6BQ8NI32 183 aa10.6□□□□□ -0.71
LINC01842-201ENST00000588275 CHCHD10Q8WYQ3 142 aaPredicted RBP10.6□□□□□ -0.71
LINC01842-201ENST00000588275 NUDT11Q96G61 164 aa10.6□□□□□ -0.71
LINC01842-201ENST00000588275 APCSP02743 223 aa10.59□□□□□ -0.71
LINC01842-201ENST00000588275 C9orf62Q8N4C0 152 aa10.59□□□□□ -0.71
LINC01842-201ENST00000588275 STPG4Q8N801 248 aa10.59□□□□□ -0.71
LINC01842-201ENST00000588275 RPL39LQ96EH5 51 aaKnown RBP10.59□□□□□ -0.71
LINC01842-201ENST00000588275 EIF5AL1Q6IS14 154 aaKnown RBP10.58□□□□□ -0.72
LINC01842-201ENST00000588275 RPP21Q9H633 154 aaKnown RBP10.58□□□□□ -0.72
LINC01842-201ENST00000588275 BCL2P10415 239 aa10.57□□□□□ -0.72
LINC01842-201ENST00000588275 PRR3P79522 188 aaKnown RBP10.57□□□□□ -0.72
LINC01842-201ENST00000588275 SMIM15Q7Z3B0 74 aa10.57□□□□□ -0.72
LINC01842-201ENST00000588275 RNASE7Q9H1E1 156 aaKnown RBP10.57□□□□□ -0.72
LINC01842-201ENST00000588275 GVQW2A0A096LPI5 108 aaPredicted RBP10.56□□□□□ -0.72
LINC01842-201ENST00000588275 FGF6P10767 208 aa10.56□□□□□ -0.72
LINC01842-201ENST00000588275 LRP2P98164 4655 aa10.55□□□□□ -0.72
LINC01842-201ENST00000588275 A0A096LNI7 61 aa10.55□□□□□ -0.72
LINC01842-201ENST00000588275 NCR2O95944 276 aa10.55□□□□□ -0.72
LINC01842-201ENST00000588275 XCL1P47992 114 aa10.55□□□□□ -0.72
LINC01842-201ENST00000588275 CNFNQ9BYD5 112 aa10.55□□□□□ -0.72
LINC01842-201ENST00000588275 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
LINC01842-201ENST00000588275 FOXA3P55318 350 aaPredicted RBP10.54□□□□□ -0.72
LINC01842-201ENST00000588275 ODF1Q14990 250 aa10.54□□□□□ -0.72
LINC01842-201ENST00000588275 LINC00526Q96FQ7 95 aa10.54□□□□□ -0.72
LINC01842-201ENST00000588275 H7C423 109 aa10.53□□□□□ -0.72
LINC01842-201ENST00000588275 K7EN84 100 aa10.53□□□□□ -0.72
LINC01842-201ENST00000588275 FOXI1Q12951 378 aa10.53□□□□□ -0.72
LINC01842-201ENST00000588275 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
LINC01842-201ENST00000588275 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
LINC01842-201ENST00000588275 PMCHP20382 165 aa10.52□□□□□ -0.73
LINC01842-201ENST00000588275 OR5A1Q8NGJ0 315 aa10.52□□□□□ -0.73
LINC01842-201ENST00000588275 OCC1Q8TAD7 63 aa10.52□□□□□ -0.73
LINC01842-201ENST00000588275 LINC01600Q96MT4 127 aa10.52□□□□□ -0.73
LINC01842-201ENST00000588275 CCL25O15444 150 aa10.51□□□□□ -0.73
LINC01842-201ENST00000588275 ZNF25P17030 456 aaPredicted RBP10.51□□□□□ -0.73
LINC01842-201ENST00000588275 TEX261Q6UWH6 196 aa10.51□□□□□ -0.73
LINC01842-201ENST00000588275 CARD19Q96LW7 228 aa10.51□□□□□ -0.73
LINC01842-201ENST00000588275 I3L3M4 83 aa10.5□□□□□ -0.73
LINC01842-201ENST00000588275 GATCO43716 136 aaKnown RBP10.5□□□□□ -0.73
LINC01842-201ENST00000588275 PKIGQ9Y2B9 76 aa10.5□□□□□ -0.73
LINC01842-201ENST00000588275 IGHV1-58A0A0C4DH39 117 aa10.49□□□□□ -0.73
LINC01842-201ENST00000588275 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
LINC01842-201ENST00000588275 TAGLN2P37802 199 aaKnown RBP10.49□□□□□ -0.73
LINC01842-201ENST00000588275 TMEM242Q9NWH2 141 aa10.49□□□□□ -0.73
LINC01842-201ENST00000588275 LINC00474Q9P2X8 69 aa10.49□□□□□ -0.73
LINC01842-201ENST00000588275 RNF213Q63HN8 5207 aa10.49□□□□□ -0.73
LINC01842-201ENST00000588275 FAM231BA6NCW3 169 aa10.48□□□□□ -0.73
LINC01842-201ENST00000588275 REG3GQ6UW15 175 aa10.48□□□□□ -0.73
LINC01842-201ENST00000588275 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
LINC01842-201ENST00000588275 A0A0J9YXV3 536 aa10.47□□□□□ -0.73
LINC01842-201ENST00000588275 ZNF561-AS1K7EIQ3 104 aa10.47□□□□□ -0.73
LINC01842-201ENST00000588275 CEBPGP53567 150 aa10.47□□□□□ -0.73
LINC01842-201ENST00000588275 SS18Q15532 418 aa10.47□□□□□ -0.73
LINC01842-201ENST00000588275 SPINK6Q6UWN8 80 aa10.47□□□□□ -0.73
LINC01842-201ENST00000588275 BORCS7Q96B45 105 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 432.7 ms