RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SPANXCQ9NY87 97 aa13.63□□□□□ -0.23
DDX39A-206ENST00000587730 TRBV30A0A0K0K1B3 111 aa13.62□□□□□ -0.23
DDX39A-206ENST00000587730 DUX5Q96PT3 197 aa13.62□□□□□ -0.23
DDX39A-206ENST00000587730 SPXQ9BT56 116 aa13.62□□□□□ -0.23
DDX39A-206ENST00000587730 YAE1D1Q9NRH1 226 aa13.62□□□□□ -0.23
DDX39A-206ENST00000587730 CARD19Q96LW7 228 aa13.62□□□□□ -0.23
DDX39A-206ENST00000587730 PEMTQ9UBM1 199 aa13.62□□□□□ -0.23
DDX39A-206ENST00000587730 CENPEQ02224 2701 aa13.61□□□□□ -0.23
DDX39A-206ENST00000587730 TIMM17BO60830 172 aa13.61□□□□□ -0.23
DDX39A-206ENST00000587730 C10orf99Q6UWK7 81 aa13.61□□□□□ -0.23
DDX39A-206ENST00000587730 ANKRD29Q8N6D5 301 aa13.61□□□□□ -0.23
DDX39A-206ENST00000587730 H3BMM0 161 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 SPINK8P0C7L1 97 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 Q1RN00 199 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 Q6YL49 198 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 Q6ZUT4 128 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 DUX3Q96PT4 197 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 ZNF702PQ9H963 129 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 CSMD1Q96PZ7 3565 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 RAX2Q96IS3 184 aa13.6□□□□□ -0.23
DDX39A-206ENST00000587730 C9JAW5 83 aa13.59□□□□□ -0.23
DDX39A-206ENST00000587730 CKS1BP61024 79 aa13.59□□□□□ -0.23
DDX39A-206ENST00000587730 VSIG2Q96IQ7 327 aa13.59□□□□□ -0.23
DDX39A-206ENST00000587730 CELSR2Q9HCU4 2923 aa13.59□□□□□ -0.23
DDX39A-206ENST00000587730 NOTCH2Q04721 2471 aa13.58□□□□□ -0.24
DDX39A-206ENST00000587730 FSHBP01225 129 aa13.58□□□□□ -0.24
DDX39A-206ENST00000587730 COX6CP09669 75 aa13.58□□□□□ -0.24
DDX39A-206ENST00000587730 IFITM1P13164 125 aa13.58□□□□□ -0.24
DDX39A-206ENST00000587730 DEFB131AP59861 70 aa13.58□□□□□ -0.24
DDX39A-206ENST00000587730 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
DDX39A-206ENST00000587730 MIAQ16674 131 aa13.57□□□□□ -0.24
DDX39A-206ENST00000587730 CLUHP3Q96NS8 147 aa13.57□□□□□ -0.24
DDX39A-206ENST00000587730 LITAFQ99732 161 aa13.57□□□□□ -0.24
DDX39A-206ENST00000587730 IGHV3-64A0A075B6Q5 118 aa13.57□□□□□ -0.24
DDX39A-206ENST00000587730 TGFAP01135 160 aa13.57□□□□□ -0.24
DDX39A-206ENST00000587730 RBMY1A1P0DJD3 496 aaKnown RBP13.57□□□□□ -0.24
DDX39A-206ENST00000587730 RBMY1CP0DJD4 496 aa13.57□□□□□ -0.24
DDX39A-206ENST00000587730 RBMY1FQ15415 496 aaKnown RBP13.57□□□□□ -0.24
DDX39A-206ENST00000587730 UBE2D4Q9Y2X8 147 aa13.57□□□□□ -0.24
DDX39A-206ENST00000587730 A0A096LNT2 108 aa13.56□□□□□ -0.24
DDX39A-206ENST00000587730 KNCNA6PVL3 124 aa13.56□□□□□ -0.24
DDX39A-206ENST00000587730 IGHV3-53P01767 116 aa13.56□□□□□ -0.24
DDX39A-206ENST00000587730 BEAN1Q3B7T3 259 aa13.56□□□□□ -0.24
DDX39A-206ENST00000587730 LINC01620Q4KN68 170 aa13.56□□□□□ -0.24
DDX39A-206ENST00000587730 RPL13AP40429 203 aaKnown RBP13.55□□□□□ -0.24
DDX39A-206ENST00000587730 ZFAND6Q6FIF0 208 aa13.55□□□□□ -0.24
DDX39A-206ENST00000587730 Q8N2B8 174 aa13.55□□□□□ -0.24
DDX39A-206ENST00000587730 FAM104AQ969W3 186 aa13.55□□□□□ -0.24
DDX39A-206ENST00000587730 CHCHD7Q9BUK0 85 aa13.55□□□□□ -0.24
DDX39A-206ENST00000587730 GEMIN7Q9H840 131 aaKnown RBP13.55□□□□□ -0.24
DDX39A-206ENST00000587730 EIF4EBP3O60516 100 aaPredicted RBP13.55□□□□□ -0.24
DDX39A-206ENST00000587730 TIRAPP58753 221 aa13.55□□□□□ -0.24
DDX39A-206ENST00000587730 COPS9Q8WXC6 57 aa13.55□□□□□ -0.24
DDX39A-206ENST00000587730 TEX15Q9BXT5 2789 aa13.54□□□□□ -0.24
DDX39A-206ENST00000587730 TRBV10-2A0A0K0K1G8 114 aa13.54□□□□□ -0.24
DDX39A-206ENST00000587730 INSP01308 110 aa13.54□□□□□ -0.24
DDX39A-206ENST00000587730 XGP55808 180 aa13.53□□□□□ -0.24
DDX39A-206ENST00000587730 HIST2H2BCQ6DN03 193 aa13.53□□□□□ -0.24
DDX39A-206ENST00000587730 CSMD2Q7Z408 3487 aa13.53□□□□□ -0.24
DDX39A-206ENST00000587730 AKAP6Q13023 2319 aa13.53□□□□□ -0.24
DDX39A-206ENST00000587730 PRSS2P07478 247 aa13.53□□□□□ -0.24
DDX39A-206ENST00000587730 HTN1P15515 57 aa13.53□□□□□ -0.24
DDX39A-206ENST00000587730 C4orf3Q8WVX3 66 aa13.53□□□□□ -0.24
DDX39A-206ENST00000587730 UNC79Q9P2D8 2635 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 IGLV5-45A0A087WSX0 123 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 IGHV3-73A0A0B4J1V6 119 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 H7C2G1 150 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 RS1O15537 224 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 MT-ATP8P03928 68 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 FHL3Q13643 280 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 CIRBPQ14011 172 aaKnown RBP13.52□□□□□ -0.25
DDX39A-206ENST00000587730 FBN2P35556 2912 aa13.52□□□□□ -0.25
DDX39A-206ENST00000587730 H3BT86 120 aa13.51□□□□□ -0.25
DDX39A-206ENST00000587730 LINC01587Q99440 93 aa13.51□□□□□ -0.25
DDX39A-206ENST00000587730 ICOSQ9Y6W8 199 aa13.51□□□□□ -0.25
DDX39A-206ENST00000587730 RBMY1BA6NDE4 496 aaKnown RBP13.5□□□□□ -0.25
DDX39A-206ENST00000587730 RBMY1EA6NEQ0 496 aaKnown RBP13.5□□□□□ -0.25
DDX39A-206ENST00000587730 TRIAP1O43715 76 aa13.5□□□□□ -0.25
DDX39A-206ENST00000587730 RBMY1DP0C7P1 496 aaKnown RBP13.5□□□□□ -0.25
DDX39A-206ENST00000587730 C11orf72Q8NBR9 251 aa13.5□□□□□ -0.25
DDX39A-206ENST00000587730 DYNLRB2Q8TF09 96 aa13.5□□□□□ -0.25
DDX39A-206ENST00000587730 TRAV8-3A0A0A6YYJ7 113 aa13.5□□□□□ -0.25
DDX39A-206ENST00000587730 NDUFA1O15239 70 aa13.5□□□□□ -0.25
DDX39A-206ENST00000587730 SLURP1P55000 103 aa13.5□□□□□ -0.25
DDX39A-206ENST00000587730 MAP6D1Q9H9H5 199 aa13.5□□□□□ -0.25
DDX39A-206ENST00000587730 PROK1P58294 105 aa13.49□□□□□ -0.25
DDX39A-206ENST00000587730 TMEM61Q8N0U2 210 aa13.49□□□□□ -0.25
DDX39A-206ENST00000587730 HERVK_113P63121 156 aa13.48□□□□□ -0.25
DDX39A-206ENST00000587730 VPS13CQ709C8 3753 aa13.48□□□□□ -0.25
DDX39A-206ENST00000587730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.48□□□□□ -0.253e-15■■□□□ 14
DDX39A-206ENST00000587730 TRAV25A0A0B4J276 109 aa13.48□□□□□ -0.25
DDX39A-206ENST00000587730 DGAT2L7PQ6IED9 249 aa13.48□□□□□ -0.25
DDX39A-206ENST00000587730 ABCA12Q86UK0 2595 aa13.47□□□□□ -0.25
DDX39A-206ENST00000587730 CEMP1Q6PRD7 247 aaPredicted RBP13.47□□□□□ -0.25
DDX39A-206ENST00000587730 FAM19A3Q7Z5A8 133 aa13.47□□□□□ -0.25
DDX39A-206ENST00000587730 SPG11Q96JI7 2443 aa13.47□□□□□ -0.25
DDX39A-206ENST00000587730 ADARB2-AS1A8MUL3 147 aa13.46□□□□□ -0.25
DDX39A-206ENST00000587730 TEX29Q8N6K0 151 aa13.46□□□□□ -0.25
DDX39A-206ENST00000587730 NTN5Q8WTR8 489 aaPredicted RBP13.46□□□□□ -0.25
DDX39A-206ENST00000587730 UBE2WQ96B02 151 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms