RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 RNF213Q63HN8 5207 aa8.85□□□□□ -0.99
DNMT1-213ENST00000587604 C19orf71A6NCJ1 209 aa8.85□□□□□ -0.99
DNMT1-213ENST00000587604 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
DNMT1-213ENST00000587604 NDUFS6O75380 124 aaKnown RBP8.85□□□□□ -0.99
DNMT1-213ENST00000587604 TRGC1P0CF51 173 aa8.85□□□□□ -0.99
DNMT1-213ENST00000587604 RPS10P46783 165 aaKnown RBP8.85□□□□□ -0.99
DNMT1-213ENST00000587604 COTL1Q14019 142 aa8.85□□□□□ -0.99
DNMT1-213ENST00000587604 CENPWQ5EE01 88 aa8.85□□□□□ -0.99
DNMT1-213ENST00000587604 LINC01600Q96MT4 127 aa8.85□□□□□ -0.99
DNMT1-213ENST00000587604 XKRY2A2RUG3 117 aa8.84□□□□□ -0.99
DNMT1-213ENST00000587604 SMLR1H3BR10 107 aa8.84□□□□□ -0.99
DNMT1-213ENST00000587604 AMTP48728 403 aa8.84□□□□□ -0.99
DNMT1-213ENST00000587604 GTSF1Q8WW33 167 aa8.84□□□□□ -0.99
DNMT1-213ENST00000587604 MANBALQ9NQG1 85 aa8.84□□□□□ -0.99
DNMT1-213ENST00000587604 NTF3P20783 257 aa8.83□□□□□ -1
DNMT1-213ENST00000587604 CCL20P78556 96 aa8.83□□□□□ -1
DNMT1-213ENST00000587604 MAJINQ3KP22 176 aa8.83□□□□□ -1
DNMT1-213ENST00000587604 LYZL1Q6UWQ5 148 aa8.83□□□□□ -1
DNMT1-213ENST00000587604 PRSS3P2Q8NHM4 247 aa8.83□□□□□ -1
DNMT1-213ENST00000587604 SMIM12Q96EX1 92 aa8.83□□□□□ -1
DNMT1-213ENST00000587604 GNG13Q9P2W3 67 aa8.83□□□□□ -1
DNMT1-213ENST00000587604 KANTRA0A1W2PQU2 76 aa8.82□□□□□ -1
DNMT1-213ENST00000587604 HMSDA8MTL9 139 aa8.82□□□□□ -1
DNMT1-213ENST00000587604 IFNA1P01562 189 aa8.82□□□□□ -1
DNMT1-213ENST00000587604 EIF5AP63241 154 aaKnown RBP8.82□□□□□ -1
DNMT1-213ENST00000587604 PRR3P79522 188 aaKnown RBP8.82□□□□□ -1
DNMT1-213ENST00000587604 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
DNMT1-213ENST00000587604 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
DNMT1-213ENST00000587604 TRAV1-1A0A0B4J248 108 aa8.81□□□□□ -1
DNMT1-213ENST00000587604 IGKV2-24A0A0C4DH68 120 aa8.81□□□□□ -1
DNMT1-213ENST00000587604 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
DNMT1-213ENST00000587604 RAB19A4D1S5 217 aa8.81□□□□□ -1
DNMT1-213ENST00000587604 BCL2L11O43521 198 aa8.81□□□□□ -1
DNMT1-213ENST00000587604 GNG4P50150 75 aa8.81□□□□□ -1
DNMT1-213ENST00000587604 STPG4Q8N801 248 aa8.81□□□□□ -1
DNMT1-213ENST00000587604 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
DNMT1-213ENST00000587604 GVQW2A0A096LPI5 108 aaPredicted RBP8.8□□□□□ -1
DNMT1-213ENST00000587604 AMMECR1LQ6DCA0 310 aa8.8□□□□□ -1
DNMT1-213ENST00000587604 BIN3Q9NQY0 253 aa8.8□□□□□ -1
DNMT1-213ENST00000587604 A0A0J9YXV3 536 aa8.79□□□□□ -1
DNMT1-213ENST00000587604 H7C423 109 aa8.79□□□□□ -1
DNMT1-213ENST00000587604 TWIST1Q15672 202 aa8.79□□□□□ -1
DNMT1-213ENST00000587604 RGS21Q2M5E4 152 aa8.79□□□□□ -1
DNMT1-213ENST00000587604 GATD1Q8NB37 220 aa8.79□□□□□ -1
DNMT1-213ENST00000587604 LYPD6BQ8NI32 183 aa8.79□□□□□ -1
DNMT1-213ENST00000587604 CNFNQ9BYD5 112 aa8.79□□□□□ -1
DNMT1-213ENST00000587604 NCR2O95944 276 aa8.78□□□□□ -1
DNMT1-213ENST00000587604 CTRLP40313 264 aa8.78□□□□□ -1
DNMT1-213ENST00000587604 MEF2BQ02080 365 aaPredicted RBP8.78□□□□□ -1
DNMT1-213ENST00000587604 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
DNMT1-213ENST00000587604 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
DNMT1-213ENST00000587604 TRBV20OR9-2A0A075B6H5 130 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 A0A096LNI7 61 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 TEX46H3BTG2 121 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 PDE6DO43924 150 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 FOXI1Q12951 378 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 RNASEKQ6P5S7 137 aaKnown RBP8.77□□□□□ -1.01
DNMT1-213ENST00000587604 Q6ZNX1 250 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 NUDT10Q8NFP7 164 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 NUDT11Q96G61 164 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 MED9Q9NWA0 146 aa8.77□□□□□ -1.01
DNMT1-213ENST00000587604 TRAV26-2A0A0B4J265 109 aa8.76□□□□□ -1.01
DNMT1-213ENST00000587604 FGF6P10767 208 aa8.76□□□□□ -1.01
DNMT1-213ENST00000587604 ODF1Q14990 250 aa8.76□□□□□ -1.01
DNMT1-213ENST00000587604 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
DNMT1-213ENST00000587604 PKIGQ9Y2B9 76 aa8.76□□□□□ -1.01
DNMT1-213ENST00000587604 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.75□□□□□ -1.01
DNMT1-213ENST00000587604 IGKV2-29A2NJV5 120 aaPredicted RBP8.75□□□□□ -1.01
DNMT1-213ENST00000587604 APCSP02743 223 aa8.75□□□□□ -1.01
DNMT1-213ENST00000587604 OR5A1Q8NGJ0 315 aa8.75□□□□□ -1.01
DNMT1-213ENST00000587604 RPL39LQ96EH5 51 aaKnown RBP8.75□□□□□ -1.01
DNMT1-213ENST00000587604 ZNF25P17030 456 aaPredicted RBP8.74□□□□□ -1.01
DNMT1-213ENST00000587604 SRSF9Q13242 221 aaKnown RBP eCLIP8.74□□□□□ -1.01
DNMT1-213ENST00000587604 EIF5AL1Q6IS14 154 aaKnown RBP8.74□□□□□ -1.01
DNMT1-213ENST00000587604 TEX261Q6UWH6 196 aa8.74□□□□□ -1.01
DNMT1-213ENST00000587604 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
DNMT1-213ENST00000587604 IGHV1-58A0A0C4DH39 117 aa8.73□□□□□ -1.01
DNMT1-213ENST00000587604 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
DNMT1-213ENST00000587604 XCL1P47992 114 aa8.73□□□□□ -1.01
DNMT1-213ENST00000587604 Q6ZRP5 223 aa8.73□□□□□ -1.01
DNMT1-213ENST00000587604 SMIM15Q7Z3B0 74 aa8.73□□□□□ -1.01
DNMT1-213ENST00000587604 BTF3L4Q96K17 158 aa8.73□□□□□ -1.01
DNMT1-213ENST00000587604 LINC00959A0A1B0GUT2 108 aa8.72□□□□□ -1.01
DNMT1-213ENST00000587604 I3L3M4 83 aa8.72□□□□□ -1.01
DNMT1-213ENST00000587604 BCL2P10415 239 aa8.72□□□□□ -1.01
DNMT1-213ENST00000587604 FOXA3P55318 350 aaPredicted RBP8.72□□□□□ -1.01
DNMT1-213ENST00000587604 LINC00526Q96FQ7 95 aa8.72□□□□□ -1.01
DNMT1-213ENST00000587604 TMEM101Q96IK0 257 aa8.72□□□□□ -1.01
DNMT1-213ENST00000587604 CARD19Q96LW7 228 aa8.72□□□□□ -1.01
DNMT1-213ENST00000587604 RNASE7Q9H1E1 156 aaKnown RBP8.72□□□□□ -1.01
DNMT1-213ENST00000587604 FAM231BA6NCW3 169 aa8.71□□□□□ -1.02
DNMT1-213ENST00000587604 CCL25O15444 150 aa8.71□□□□□ -1.02
DNMT1-213ENST00000587604 PMCHP20382 165 aa8.71□□□□□ -1.02
DNMT1-213ENST00000587604 OCC1Q8TAD7 63 aa8.71□□□□□ -1.02
DNMT1-213ENST00000587604 TRBV6-5A0A0K0K1A5 114 aa8.7□□□□□ -1.02
DNMT1-213ENST00000587604 K7EN84 100 aa8.7□□□□□ -1.02
DNMT1-213ENST00000587604 ESDP10768 282 aa8.7□□□□□ -1.02
DNMT1-213ENST00000587604 SS18Q15532 418 aa8.7□□□□□ -1.02
DNMT1-213ENST00000587604 FAM210AQ96ND0 272 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms