RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 TMEM97Q5BJF2 176 aa12.52□□□□□ -0.41
H3F3B-206ENST00000587560 Q8N8P6 123 aa12.52□□□□□ -0.41
H3F3B-206ENST00000587560 URB1-AS1Q96HZ7 61 aa12.52□□□□□ -0.41
H3F3B-206ENST00000587560 UPK3BQ9BT76 320 aa12.52□□□□□ -0.41
H3F3B-206ENST00000587560 ESDP10768 282 aa12.51□□□□□ -0.41
H3F3B-206ENST00000587560 PMCHP20382 165 aa12.51□□□□□ -0.41
H3F3B-206ENST00000587560 COTL1Q14019 142 aa12.51□□□□□ -0.41
H3F3B-206ENST00000587560 LOC389332A0A1B0GUA5 103 aa12.5□□□□□ -0.41
H3F3B-206ENST00000587560 IFI27P40305 119 aaPredicted RBP12.5□□□□□ -0.41
H3F3B-206ENST00000587560 CCL18P55774 89 aa12.5□□□□□ -0.41
H3F3B-206ENST00000587560 Q0VG73 95 aa12.5□□□□□ -0.41
H3F3B-206ENST00000587560 CHCHD7Q9BUK0 85 aa12.5□□□□□ -0.41
H3F3B-206ENST00000587560 NXT2Q9NPJ8 142 aaKnown RBP12.5□□□□□ -0.41
H3F3B-206ENST00000587560 LGALS9CQ6DKI2 356 aa12.49□□□□□ -0.41
H3F3B-206ENST00000587560 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.49□□□□□ -0.41
H3F3B-206ENST00000587560 DEFB104AQ8WTQ1 72 aa12.49□□□□□ -0.41
H3F3B-206ENST00000587560 K7EMI3 77 aa12.48□□□□□ -0.41
H3F3B-206ENST00000587560 TCAPO15273 167 aa12.48□□□□□ -0.41
H3F3B-206ENST00000587560 IGHV1-24A0A0C4DH33 117 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 KIR2DL4Q99706 377 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
H3F3B-206ENST00000587560 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.41
H3F3B-206ENST00000587560 TRBV25-1A0A075B6N4 114 aa12.46□□□□□ -0.41
H3F3B-206ENST00000587560 LINC00310P59036 64 aa12.46□□□□□ -0.41
H3F3B-206ENST00000587560 AMTP48728 403 aa12.45□□□□□ -0.42
H3F3B-206ENST00000587560 WFDC10BQ8IUB3 73 aa12.45□□□□□ -0.42
H3F3B-206ENST00000587560 LINC00476Q8WZB0 136 aa12.45□□□□□ -0.42
H3F3B-206ENST00000587560 NIT1Q86X76 327 aa12.44□□□□□ -0.42
H3F3B-206ENST00000587560 PRSS3P2Q8NHM4 247 aa12.44□□□□□ -0.42
H3F3B-206ENST00000587560 TMEM243Q9BU79 118 aa12.44□□□□□ -0.42
H3F3B-206ENST00000587560 TRAV8-6A0A0B4J262 113 aa12.43□□□□□ -0.42
H3F3B-206ENST00000587560 H7C423 109 aa12.43□□□□□ -0.42
H3F3B-206ENST00000587560 LINC00614P0C842 121 aa12.43□□□□□ -0.42
H3F3B-206ENST00000587560 DNAH10OSP0CZ25 163 aa12.43□□□□□ -0.42
H3F3B-206ENST00000587560 FCER1GP30273 86 aa12.43□□□□□ -0.42
H3F3B-206ENST00000587560 LAGE3Q14657 143 aa12.43□□□□□ -0.42
H3F3B-206ENST00000587560 C20orf203Q8NBC4 194 aa12.43□□□□□ -0.42
H3F3B-206ENST00000587560 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
H3F3B-206ENST00000587560 ALMS1Q8TCU4 4167 aa12.41□□□□□ -0.42
H3F3B-206ENST00000587560 HECTD4Q9Y4D8 3996 aa12.41□□□□□ -0.42
H3F3B-206ENST00000587560 A0A096LNJ9 63 aa12.41□□□□□ -0.42
H3F3B-206ENST00000587560 C1orf196B1AJZ1 125 aa12.41□□□□□ -0.42
H3F3B-206ENST00000587560 LINC01556Q5JQF7 62 aa12.41□□□□□ -0.42
H3F3B-206ENST00000587560 COA6Q5JTJ3 125 aaKnown RBP12.41□□□□□ -0.42
H3F3B-206ENST00000587560 FA2HQ7L5A8 372 aa12.41□□□□□ -0.42
H3F3B-206ENST00000587560 MRPL52Q86TS9 123 aaKnown RBP12.41□□□□□ -0.42
H3F3B-206ENST00000587560 CHCHD1Q96BP2 118 aaKnown RBP12.41□□□□□ -0.42
H3F3B-206ENST00000587560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.4□□□□□ -0.42
H3F3B-206ENST00000587560 A0A1B0GUV1 79 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 IGKV2-29A2NJV5 120 aaPredicted RBP12.4□□□□□ -0.42
H3F3B-206ENST00000587560 SIVA1O15304 175 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 RAB5BP61020 215 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 UBE2DNLQ8IWF7 75 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 Q8N3U1 123 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 FAM104AQ969W3 186 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 Q9H8V8 135 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 AP5S1Q9NUS5 200 aa12.4□□□□□ -0.42
H3F3B-206ENST00000587560 TIMM21Q9BVV7 248 aa12.39□□□□□ -0.43
H3F3B-206ENST00000587560 NUPR1O60356 82 aa12.38□□□□□ -0.43
H3F3B-206ENST00000587560 SERF1AO75920 110 aa12.38□□□□□ -0.43
H3F3B-206ENST00000587560 PKIAP61925 76 aa12.38□□□□□ -0.43
H3F3B-206ENST00000587560 RPL39P62891 51 aaKnown RBP12.38□□□□□ -0.43
H3F3B-206ENST00000587560 GAGE6Q13070 117 aa12.38□□□□□ -0.43
H3F3B-206ENST00000587560 MPV17L2Q567V2 206 aa12.38□□□□□ -0.43
H3F3B-206ENST00000587560 BAGE3Q86Y29 109 aa12.38□□□□□ -0.43
H3F3B-206ENST00000587560 UBE2D4Q9Y2X8 147 aa12.38□□□□□ -0.43
H3F3B-206ENST00000587560 CSDC2Q9Y534 153 aaKnown RBP12.38□□□□□ -0.43
H3F3B-206ENST00000587560 FGF6P10767 208 aa12.37□□□□□ -0.43
H3F3B-206ENST00000587560 RBX1P62877 108 aa12.37□□□□□ -0.43
H3F3B-206ENST00000587560 RNASEKQ6P5S7 137 aaKnown RBP12.36□□□□□ -0.43
H3F3B-206ENST00000587560 C2orf66Q6UXQ4 117 aa12.36□□□□□ -0.43
H3F3B-206ENST00000587560 TOMM6Q96B49 74 aa12.36□□□□□ -0.43
H3F3B-206ENST00000587560 PYGO1Q9Y3Y4 419 aa12.36□□□□□ -0.43
H3F3B-206ENST00000587560 IGLV4-60A0A075B6I1 120 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 IGIPA6NJ69 53 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 K7EP13 123 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 LY6G6CO95867 125 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 ZNF25P17030 456 aaPredicted RBP12.35□□□□□ -0.43
H3F3B-206ENST00000587560 Q8N976 141 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 TMEM18Q96B42 140 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 KRTAP1-5Q9BYS1 174 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 CYSLTR1Q9Y271 337 aa12.35□□□□□ -0.43
H3F3B-206ENST00000587560 UBE2L6O14933 153 aa12.34□□□□□ -0.43
H3F3B-206ENST00000587560 G0S2P27469 103 aa12.34□□□□□ -0.43
H3F3B-206ENST00000587560 SPANXA1Q9NS26 97 aa12.34□□□□□ -0.43
H3F3B-206ENST00000587560 TMEM262E9PQX1 116 aa12.33□□□□□ -0.44
H3F3B-206ENST00000587560 IGHV3-30P01768 117 aa12.33□□□□□ -0.44
H3F3B-206ENST00000587560 IGHV3-33P01772 117 aa12.33□□□□□ -0.44
H3F3B-206ENST00000587560 IGHV3-30-3P0DP02 117 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms