RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 C2orf91Q6ZV80 131 aa9.85□□□□□ -0.83
RNF43-208ENST00000584437 ODF3BA8MYP8 253 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 NDUFA7O95182 113 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 DAZAP2Q15038 168 aaPredicted RBP9.84□□□□□ -0.83
RNF43-208ENST00000584437 ESM1Q9NQ30 184 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 TIMM17BO60830 172 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 MRPL55Q7Z7F7 128 aaKnown RBP9.84□□□□□ -0.83
RNF43-208ENST00000584437 PLCE1Q9P212 2302 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 MAP6D1Q9H9H5 199 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 RNF185Q96GF1 192 aa9.84□□□□□ -0.83
RNF43-208ENST00000584437 CFAP126Q5VTH2 177 aa9.83□□□□□ -0.84
RNF43-208ENST00000584437 MRPS12O15235 138 aaKnown RBP9.83□□□□□ -0.84
RNF43-208ENST00000584437 PLA2G5P39877 138 aa9.83□□□□□ -0.84
RNF43-208ENST00000584437 SEC61GP60059 68 aa9.83□□□□□ -0.84
RNF43-208ENST00000584437 H0Y9J4 135 aa9.83□□□□□ -0.84
RNF43-208ENST00000584437 ENHOQ6UWT2 76 aa9.83□□□□□ -0.84
RNF43-208ENST00000584437 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
RNF43-208ENST00000584437 FAM222AQ5U5X8 452 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 CRIP1P50238 77 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 FBXL19-AS1Q494R0 122 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 PYGO1Q9Y3Y4 419 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 V9GYY9 64 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 SPTSSBQ8NFR3 76 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 PCNX2A6NKB5 2137 aa9.82□□□□□ -0.84
RNF43-208ENST00000584437 TRBV6-5A0A0K0K1A5 114 aa9.81□□□□□ -0.84
RNF43-208ENST00000584437 J3QKU1 62 aa9.81□□□□□ -0.84
RNF43-208ENST00000584437 K7EQG2 157 aa9.81□□□□□ -0.84
RNF43-208ENST00000584437 ADORA2A-AS1P86434 159 aa9.81□□□□□ -0.84
RNF43-208ENST00000584437 TRBV27A0A0K0K1C4 114 aa9.8□□□□□ -0.84
RNF43-208ENST00000584437 M0QY20 66 aa9.8□□□□□ -0.84
RNF43-208ENST00000584437 F8W735 103 aaPredicted RBP9.8□□□□□ -0.84
RNF43-208ENST00000584437 IGF1P05019 195 aa9.8□□□□□ -0.84
RNF43-208ENST00000584437 FSTL3O95633 263 aa9.8□□□□□ -0.84
RNF43-208ENST00000584437 INSL3P51460 131 aa9.8□□□□□ -0.84
RNF43-208ENST00000584437 DEFB135Q30KP9 77 aa9.8□□□□□ -0.84
RNF43-208ENST00000584437 LST1O00453 97 aa9.79□□□□□ -0.84
RNF43-208ENST00000584437 NCOA6Q14686 2063 aaPredicted RBP9.79□□□□□ -0.84
RNF43-208ENST00000584437 REG3AQ06141 175 aa9.79□□□□□ -0.84
RNF43-208ENST00000584437 B9D2Q9BPU9 175 aa9.79□□□□□ -0.84
RNF43-208ENST00000584437 Q6ZTI0 123 aa9.79□□□□□ -0.84
RNF43-208ENST00000584437 USP17L23D6RBM5 183 aa9.79□□□□□ -0.84
RNF43-208ENST00000584437 COX7CP15954 63 aa9.79□□□□□ -0.84
RNF43-208ENST00000584437 C1orf229Q6ZS94 237 aaPredicted RBP9.78□□□□□ -0.84
RNF43-208ENST00000584437 TNFRSF13BO14836 293 aaPredicted RBP9.78□□□□□ -0.84
RNF43-208ENST00000584437 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
RNF43-208ENST00000584437 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
RNF43-208ENST00000584437 LINC00269Q8N2A0 174 aa9.78□□□□□ -0.84
RNF43-208ENST00000584437 ZFAND3Q9H8U3 227 aa9.78□□□□□ -0.84
RNF43-208ENST00000584437 TNCP24821 2201 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 IGKV4-1P06312 121 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 Q6Q795 121 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 FREM1Q5H8C1 2179 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 SLPIP03973 132 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 CHCHD10Q8WYQ3 142 aaPredicted RBP9.77□□□□□ -0.85
RNF43-208ENST00000584437 C20orf173Q96LM9 149 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 XGP55808 180 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 LRRC75A-AS1Q8N1F1 130 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 NRACQ8N912 160 aa9.77□□□□□ -0.85
RNF43-208ENST00000584437 EBI3Q14213 229 aa9.76□□□□□ -0.85
RNF43-208ENST00000584437 SMIM9A6NGZ8 99 aa9.76□□□□□ -0.85
RNF43-208ENST00000584437 C4orf48Q5BLP8 95 aa9.76□□□□□ -0.85
RNF43-208ENST00000584437 DSCAML1Q8TD84 2053 aa9.76□□□□□ -0.85
RNF43-208ENST00000584437 SMAD5-AS1Q9Y6J3 95 aa9.75□□□□□ -0.85
RNF43-208ENST00000584437 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
RNF43-208ENST00000584437 CCDC179H3BU77 68 aa9.74□□□□□ -0.85
RNF43-208ENST00000584437 SCXQ7RTU7 201 aa9.74□□□□□ -0.85
RNF43-208ENST00000584437 LINC01548A6NM66 108 aa9.74□□□□□ -0.85
RNF43-208ENST00000584437 C14orf177Q52M58 125 aa9.74□□□□□ -0.85
RNF43-208ENST00000584437 A0A0U1RQV1 116 aa9.74□□□□□ -0.85
RNF43-208ENST00000584437 DEFB4AO15263 64 aa9.74□□□□□ -0.85
RNF43-208ENST00000584437 LMO4P61968 165 aa9.74□□□□□ -0.85
RNF43-208ENST00000584437 C6orf99Q4VX62 202 aa9.73□□□□□ -0.85
RNF43-208ENST00000584437 FAM19A3Q7Z5A8 133 aa9.73□□□□□ -0.85
RNF43-208ENST00000584437 TRBV6-4A0A1B0GX49 114 aa9.73□□□□□ -0.85
RNF43-208ENST00000584437 LY6LH3BQJ8 138 aa9.73□□□□□ -0.85
RNF43-208ENST00000584437 TRBV6-8A0A0A6YYG3 113 aa9.72□□□□□ -0.85
RNF43-208ENST00000584437 CCKP06307 115 aa9.72□□□□□ -0.85
RNF43-208ENST00000584437 TSHBP01222 138 aa9.72□□□□□ -0.85
RNF43-208ENST00000584437 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
RNF43-208ENST00000584437 Q6JHZ5 121 aa9.72□□□□□ -0.85
RNF43-208ENST00000584437 A0A1W2PNU3 283 aaPredicted RBP9.71□□□□□ -0.85
RNF43-208ENST00000584437 POLR2KP53803 58 aaKnown RBP9.71□□□□□ -0.86
RNF43-208ENST00000584437 DEFB114Q30KQ6 69 aa9.71□□□□□ -0.86
RNF43-208ENST00000584437 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
RNF43-208ENST00000584437 CNFNQ9BYD5 112 aa9.7□□□□□ -0.86
RNF43-208ENST00000584437 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
RNF43-208ENST00000584437 LINC00310P59036 64 aa9.69□□□□□ -0.86
RNF43-208ENST00000584437 CASC2Q6XLA1 102 aa9.69□□□□□ -0.86
RNF43-208ENST00000584437 Q8N976 141 aa9.69□□□□□ -0.86
RNF43-208ENST00000584437 ZNF106Q9H2Y7 1883 aaKnown RBP9.69□□□□□ -0.86
RNF43-208ENST00000584437 ADAMTS9Q9P2N4 1935 aa9.69□□□□□ -0.86
RNF43-208ENST00000584437 PRR15LQ9BU68 103 aa9.68□□□□□ -0.86
RNF43-208ENST00000584437 WFDC11Q8NEX6 87 aa9.68□□□□□ -0.86
RNF43-208ENST00000584437 KIR2DL5BQ8NHK3 375 aa9.68□□□□□ -0.86
RNF43-208ENST00000584437 PTPRQQ9UMZ3 2332 aa9.68□□□□□ -0.86
RNF43-208ENST00000584437 Q6ZS46 218 aa9.68□□□□□ -0.86
RNF43-208ENST00000584437 SMIM26A0A096LP01 95 aa9.67□□□□□ -0.86
RNF43-208ENST00000584437 WISP2O76076 250 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms