RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 IFT172Q9UG01 1749 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 ZFYVE26Q68DK2 2539 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 PIEZO1Q92508 2521 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 POLQO75417 2590 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 ZNF609O15014 1411 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 PPIP5K1Q6PFW1 1433 aa0.29□□□□□ -2.36
PPP4R1-227ENST00000583988 A0A0D9SFI3 127 aa0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 SPINK8P0C7L1 97 aa0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 AKAIN1P0CW23 69 aa0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 CCL18P55774 89 aa0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 C8orf59Q8N0T1 100 aaPredicted RBP0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 LSM10Q969L4 123 aaKnown RBP0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 DOCK2Q92608 1830 aa0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 KTN1Q86UP2 1357 aaKnown RBP0.28□□□□□ -2.36
PPP4R1-227ENST00000583988 FOCADQ5VW36 1801 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 PATJQ8NI35 1801 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 MAST4O15021 2626 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 CTXND1A0A1B0GTU2 59 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 ZNF815PA8K554 130 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 S100A3P33764 101 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 SPAG11BQ08648 103 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 SPAG11AQ6PDA7 123 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 CYP4F30PQ9H0H9 118 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 V9GYH0 126 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 ASXL3Q9C0F0 2248 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 AHCTF1Q8WYP5 2266 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 ZMYM4Q5VZL5 1548 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 PRDM2Q13029 1718 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 ARAP2Q8WZ64 1704 aa0.27□□□□□ -2.37
PPP4R1-227ENST00000583988 FAT4Q6V0I7 4981 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 G3V318 75 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 SSSCA1O60232 199 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 CATR1Q13166 79 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 COX17Q14061 63 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 SSBP3-AS1Q7Z2R9 100 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 CNFNQ9BYD5 112 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 SCN3BQ9NY72 215 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 BCL9LQ86UU0 1499 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 MBD5Q9P267 1494 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 KMT2DO14686 5537 aa0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 MACF1Q9UPN3 7388 aaKnown RBP0.26□□□□□ -2.37
PPP4R1-227ENST00000583988 MRC1P22897 1456 aa0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 CPSF1Q10570 1443 aaKnown RBP0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 ROCK2O75116 1388 aaKnown RBP0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 M0R135 149 aa0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 MYOZ3Q8TDC0 251 aa0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 PP6455Q8WZ26 134 aa0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 MGST2Q99735 147 aa0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 SPANXDQ9BXN6 97 aa0.25□□□□□ -2.37
PPP4R1-227ENST00000583988 DOCK1Q14185 1865 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 NALCNQ8IZF0 1738 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 FAM208BQ5VWN6 2430 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 LOC285095A0A1B0GVY8 99 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 SNAPC5O75971 98 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 APOC3P02656 99 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 TPPP2P59282 170 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 MRPL54Q6P161 138 aaKnown RBP0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 C5orf38Q86SI9 138 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 DYNLRB1Q9NP97 96 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 SPCS1Q9Y6A9 102 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 WNK3Q9BYP7 1800 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 LRRC37A2A6NM11 1700 aa0.24□□□□□ -2.37
PPP4R1-227ENST00000583988 EIF4G3O43432 1585 aaKnown RBP0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 A2ML1A8K2U0 1454 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 NCOR2Q9Y618 2525 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 TCHHQ07283 1943 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 TRBV7-3A0A075B6L6 115 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 TNFP01375 233 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 IFITM1P13164 125 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 TMEM170BQ5T4T1 132 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 C9orf153Q5TBE3 101 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 COMMD6Q7Z4G1 85 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 BAGE2Q86Y30 109 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 PRO0255Q9UI72 69 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 CACNA1CQ13936 2221 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 CELSR2Q9HCU4 2923 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 SPTBN2O15020 2390 aa0.23□□□□□ -2.37
PPP4R1-227ENST00000583988 SMG6Q86US8 1419 aaKnown RBP0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 IGSF10Q6WRI0 2623 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 KDM3BQ7LBC6 1761 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 TRAV22A0A0B4J277 110 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 LOC100130705A0A1B0GUX0 176 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 FAM24AA6NFZ4 105 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 F8VRH5 84 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 UQCR11O14957 56 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 DLEU1O43261 78 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 ATP5EP56381 51 aaPredicted RBP0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 HAMPP81172 84 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 NDUFA4L2Q9NRX3 87 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 U3KQA8 63 aa0.22□□□□□ -2.37
PPP4R1-227ENST00000583988 UBE2L5PA0A1B0GUS4 154 aa0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 CFDP00746 253 aaPredicted RBP0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 GNG4P50150 75 aa0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 UBE2L3P68036 154 aaKnown RBP0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 TMEM203Q969S6 136 aa0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 UQCR10Q9UDW1 63 aa0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 SYNE2Q8WXH0 6885 aaKnown RBP0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 WDR7Q9Y4E6 1490 aa0.21□□□□□ -2.38
PPP4R1-227ENST00000583988 OTOGQ6ZRI0 2925 aa0.2□□□□□ -2.38
PPP4R1-227ENST00000583988 ERCC6L2Q5T890 1561 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms