RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TRAV4A0A0B4J268 109 aa16.32■□□□□ 0.2
CCDC47-204ENST00000582252 CST9LQ9H4G1 147 aa16.32■□□□□ 0.2
CCDC47-204ENST00000582252 HIGD1BQ9P298 99 aa16.32■□□□□ 0.2
CCDC47-204ENST00000582252 RRN3P1Q2M238 152 aa16.31■□□□□ 0.2
CCDC47-204ENST00000582252 SPATA3Q8NHX4 192 aa16.31■□□□□ 0.2
CCDC47-204ENST00000582252 CIDEAO60543 219 aa16.31■□□□□ 0.2
CCDC47-204ENST00000582252 NPSP0C0P6 89 aa16.3■□□□□ 0.2
CCDC47-204ENST00000582252 HERVK_113P61574 105 aa16.3■□□□□ 0.2
CCDC47-204ENST00000582252 Q6ZSN1 163 aa16.3■□□□□ 0.2
CCDC47-204ENST00000582252 CSNK1G2-AS1Q8NCQ2 148 aa16.3■□□□□ 0.2
CCDC47-204ENST00000582252 SEC11AP67812 179 aa16.29■□□□□ 0.2
CCDC47-204ENST00000582252 OR11H2Q8NH07 326 aa16.29■□□□□ 0.2
CCDC47-204ENST00000582252 PYGO1Q9Y3Y4 419 aa16.29■□□□□ 0.2
CCDC47-204ENST00000582252 CMYA5Q8N3K9 4069 aa16.28■□□□□ 0.2
CCDC47-204ENST00000582252 TRBV10-1A0A0K0K1A3 114 aa16.28■□□□□ 0.2
CCDC47-204ENST00000582252 COTL1Q14019 142 aa16.28■□□□□ 0.2
CCDC47-204ENST00000582252 NOP10Q9NPE3 64 aaKnown RBP16.28■□□□□ 0.2
CCDC47-204ENST00000582252 E9PLD3 99 aa16.27■□□□□ 0.19
CCDC47-204ENST00000582252 CRYBA4P53673 196 aa16.27■□□□□ 0.19
CCDC47-204ENST00000582252 Q6ZTI0 123 aa16.27■□□□□ 0.19
CCDC47-204ENST00000582252 IGLV4-69A0A075B6H9 119 aa16.26■□□□□ 0.19
CCDC47-204ENST00000582252 ZNF25P17030 456 aaPredicted RBP16.26■□□□□ 0.19
CCDC47-204ENST00000582252 ZMAT5Q9UDW3 170 aaKnown RBP16.26■□□□□ 0.19
CCDC47-204ENST00000582252 TRAV8-6A0A0B4J262 113 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 K7EQD1 137 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 OVOL2Q9BRP0 275 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 C11orf86A6NJI1 115 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 WIPF1O43516 503 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 RPL36AP83881 106 aaKnown RBP16.25■□□□□ 0.19
CCDC47-204ENST00000582252 ORAOV1Q8WV07 137 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 RPL36ALQ969Q0 106 aaKnown RBP16.25■□□□□ 0.19
CCDC47-204ENST00000582252 ZNF479Q96JC4 524 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 VCX2Q9H322 139 aa16.25■□□□□ 0.19
CCDC47-204ENST00000582252 IGLV4-3A0A075B6K6 122 aa16.24■□□□□ 0.19
CCDC47-204ENST00000582252 TRBV25-1A0A075B6N4 114 aa16.24■□□□□ 0.19
CCDC47-204ENST00000582252 A6NDN8 102 aa16.24■□□□□ 0.19
CCDC47-204ENST00000582252 SPANXA1Q9NS26 97 aa16.24■□□□□ 0.19
CCDC47-204ENST00000582252 PKD1L1Q8TDX9 2849 aa16.23■□□□□ 0.19
CCDC47-204ENST00000582252 PLAC8L1A1L4L8 177 aa16.23■□□□□ 0.19
CCDC47-204ENST00000582252 NFE4Q86UQ8 179 aa16.23■□□□□ 0.19
CCDC47-204ENST00000582252 CHAC1Q9BUX1 264 aa16.23■□□□□ 0.19
CCDC47-204ENST00000582252 COX11Q9Y6N1 276 aa16.23■□□□□ 0.19
CCDC47-204ENST00000582252 TRBV7-3A0A075B6L6 115 aa16.22■□□□□ 0.19
CCDC47-204ENST00000582252 MDFIQ99750 246 aa16.22■□□□□ 0.19
CCDC47-204ENST00000582252 TRGV2A0A075B6R0 118 aa16.22■□□□□ 0.19
CCDC47-204ENST00000582252 GAGE1Q13065 139 aa16.22■□□□□ 0.19
CCDC47-204ENST00000582252 PRADC1Q9BSG0 188 aa16.22■□□□□ 0.19
CCDC47-204ENST00000582252 TTTY13Q9BZ97 58 aa16.22■□□□□ 0.19
CCDC47-204ENST00000582252 MYMXA0A1B0GTQ4 84 aa16.21■□□□□ 0.19
CCDC47-204ENST00000582252 LINC00469Q8N7U9 141 aa16.21■□□□□ 0.19
CCDC47-204ENST00000582252 ZNRF2Q8NHG8 242 aa16.21■□□□□ 0.19
CCDC47-204ENST00000582252 CHCHD7Q9BUK0 85 aa16.21■□□□□ 0.19
CCDC47-204ENST00000582252 PHLDA1Q8WV24 401 aaPredicted RBP16.2■□□□□ 0.18
CCDC47-204ENST00000582252 GAGE12BA1L429 117 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 GAGE7O76087 117 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 GAGE12FP0CL80 117 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 GAGE12GP0CL81 117 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 GAGE12IP0CL82 117 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 TAL2Q16559 108 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 TMEM170BQ5T4T1 132 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 DAZ4Q86SG3 579 aaKnown RBP16.19■□□□□ 0.18
CCDC47-204ENST00000582252 MAPKAPK5-AS1Q8N8E1 139 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 DAZ3Q9NR90 486 aaKnown RBP16.19■□□□□ 0.18
CCDC47-204ENST00000582252 Q9UF83 564 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 EMP1P54849 157 aa16.19■□□□□ 0.18
CCDC47-204ENST00000582252 AMELXQ99217 191 aa16.18■□□□□ 0.18
CCDC47-204ENST00000582252 OPRPNQ99935 248 aaPredicted RBP16.18■□□□□ 0.18
CCDC47-204ENST00000582252 IGHV3-38A0A0C4DH36 116 aa16.17■□□□□ 0.18
CCDC47-204ENST00000582252 SMIM9A6NGZ8 99 aa16.17■□□□□ 0.18
CCDC47-204ENST00000582252 SMAGPQ0VAQ4 97 aa16.17■□□□□ 0.18
CCDC47-204ENST00000582252 UBE2D4Q9Y2X8 147 aa16.17■□□□□ 0.18
CCDC47-204ENST00000582252 TAX1BP3O14907 124 aa16.16■□□□□ 0.18
CCDC47-204ENST00000582252 SLC25A29Q8N8R3 303 aa16.16■□□□□ 0.18
CCDC47-204ENST00000582252 TRBV6-4A0A1B0GX49 114 aa16.16■□□□□ 0.18
CCDC47-204ENST00000582252 TIMM21Q9BVV7 248 aa16.16■□□□□ 0.18
CCDC47-204ENST00000582252 KIR2DL5BQ8NHK3 375 aa16.15■□□□□ 0.18
CCDC47-204ENST00000582252 TRGV4A0A0C4DH28 118 aa16.14■□□□□ 0.17
CCDC47-204ENST00000582252 ZNF815PA8K554 130 aa16.14■□□□□ 0.17
CCDC47-204ENST00000582252 APOC4P55056 127 aa16.14■□□□□ 0.17
CCDC47-204ENST00000582252 UBE2D3P61077 147 aa16.14■□□□□ 0.17
CCDC47-204ENST00000582252 UBE2D2P62837 147 aa16.14■□□□□ 0.17
CCDC47-204ENST00000582252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.14■□□□□ 0.17
CCDC47-204ENST00000582252 IGKV2-29A2NJV5 120 aaPredicted RBP16.14■□□□□ 0.17
CCDC47-204ENST00000582252 GCSHP23434 173 aa16.14■□□□□ 0.17
CCDC47-204ENST00000582252 H3BRM9 83 aa16.13■□□□□ 0.17
CCDC47-204ENST00000582252 MRPS36P82909 103 aaKnown RBP16.13■□□□□ 0.17
CCDC47-204ENST00000582252 CEND1Q8N111 149 aa16.13■□□□□ 0.17
CCDC47-204ENST00000582252 GAGE12JA6NER3 117 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 GAGE4Q13068 117 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 GAGE5Q13069 117 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 GAGE13Q4V321 117 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 OXLD1Q5BKU9 147 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 DGAT2L7PQ6IED9 249 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 TM2D2Q9BX73 214 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 A0A0J9YXV3 536 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 TMEM223A0PJW6 202 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 ZNF22P17026 224 aaPredicted RBP16.11■□□□□ 0.17
CCDC47-204ENST00000582252 SCGB1D4Q6XE38 83 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 HIST1H4GQ99525 98 aa16.11■□□□□ 0.17
CCDC47-204ENST00000582252 LGALS3P17931 250 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms