RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 Q9H8V8 135 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 SND1-IT1Q9HBX3 110 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 NCOR1O75376 2440 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 E7EUB6 86 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 GFRA4Q9GZZ7 299 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 IGHV1-3A0A0C4DH29 117 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 SDHAF1A6NFY7 115 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 LINC01548A6NM66 108 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 NDUFC1O43677 76 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 MAPK1IP1LQ8NDC0 245 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 URB1-AS1Q96HZ7 61 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 LIMD2Q9BT23 127 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 WFDC10AQ9H1F0 79 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 VPREB3Q9UKI3 123 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 FLNCQ14315 2725 aa3.31□□□□□ -1.88
RTTN-206ENST00000581161 A0A096LNI7 61 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 A0A1W2PNU3 283 aaPredicted RBP3.3□□□□□ -1.88
RTTN-206ENST00000581161 PRR30Q53SZ7 412 aaPredicted RBP3.3□□□□□ -1.88
RTTN-206ENST00000581161 C4orf3Q8WVX3 66 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 PRR14LQ5THK1 2151 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 IGKV1-17P01599 117 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 CRYGDP07320 174 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 NTN5Q8WTR8 489 aaPredicted RBP3.3□□□□□ -1.88
RTTN-206ENST00000581161 FAM120AOSQ5T036 256 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 C1orf195Q5TG92 126 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 AMTNQ6UX39 209 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 A0A1B0GXF2 115 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 CCL24O00175 119 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 HRCT1Q6UXD1 115 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 Q6ZQY7 126 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 IGHV1-69DA0A0B4J2H0 117 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 TMEM213A2RRL7 107 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 SMKR1H3BMG3 65 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 H3BUA1 57 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 SPRY2O43597 315 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 IGHV1-69P01742 117 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 IGHV1-8P0DP01 117 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 ZNF833PQ6ZTB9 187 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 C5orf38Q86SI9 138 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 IGLV10-54A0A075B6I4 117 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 J3QQQ9 107 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 COX8AP10176 69 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 ATP5EP2Q5VTU8 51 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 RITA1Q96K30 269 aa3.3□□□□□ -1.88
RTTN-206ENST00000581161 MRPL35Q9NZE8 188 aaKnown RBP3.3□□□□□ -1.88
RTTN-206ENST00000581161 USF3Q68DE3 2245 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 K7EP34 96 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 FOXI1Q12951 378 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 TMEM200BQ69YZ2 307 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 UFSP1Q6NVU6 142 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 ZNF843Q8N446 348 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 MED13Q9UHV7 2174 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 TMEM75Q8N9X5 138 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 IGLV1-44P01699 117 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 INSL3P51460 131 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 LINC00311Q8N616 119 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 TMEM263Q8WUH6 116 aaKnown RBP3.29□□□□□ -1.88
RTTN-206ENST00000581161 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 CFC1P0CG37 223 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 RUSC1-AS1Q66K80 236 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 CSNK1G2-AS1Q8NCQ2 148 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 ZNF747Q9BV97 191 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 DOCK11Q5JSL3 2073 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 RPL28P46779 137 aaKnown RBP3.29□□□□□ -1.88
RTTN-206ENST00000581161 LYPD2Q6UXB3 125 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 IMUPQ9GZP8 106 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 KNTC1P50748 2209 aa3.29□□□□□ -1.88
RTTN-206ENST00000581161 TRBV7-6A0A0J9YX20 115 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 C9orf118A6NHY6 69 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 MYCNOSP40205 109 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 LOXL1Q08397 574 aaPredicted RBP3.28□□□□□ -1.88
RTTN-206ENST00000581161 IGFL4Q6B9Z1 124 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 K7ERJ3 54 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 SPINK1P00995 79 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 Q6ZUT4 128 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 DHRS4-AS1Q9P1J3 65 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 J3QL48 77 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 LGALS9O00182 355 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 C19orf71A6NCJ1 209 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 P0DMU3 169 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 FAM231AP0DMU4 169 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 FAM231CP0DMU5 169 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 EDN2P20800 178 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 Q8TAT8 98 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 FAM236AA0A1B0GUQ0 79 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 FAM236BA0A1B0GV22 79 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 K7EMI3 77 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 LINC01554Q52M75 96 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 CLEC2BQ92478 149 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 TTTY13Q9BZ97 58 aa3.28□□□□□ -1.88
RTTN-206ENST00000581161 RAI1Q7Z5J4 1906 aaPredicted RBP3.27□□□□□ -1.89
RTTN-206ENST00000581161 TRBV30A0A0K0K1B3 111 aa3.27□□□□□ -1.89
RTTN-206ENST00000581161 NPYP01303 97 aa3.27□□□□□ -1.89
RTTN-206ENST00000581161 WT1P19544 449 aaPredicted RBP3.27□□□□□ -1.89
RTTN-206ENST00000581161 SAA4P35542 130 aa3.27□□□□□ -1.89
RTTN-206ENST00000581161 IGFL2Q6UWQ7 119 aa3.27□□□□□ -1.89
RTTN-206ENST00000581161 FAM19A5Q7Z5A7 132 aaPredicted RBP3.27□□□□□ -1.89
RTTN-206ENST00000581161 DKK2Q9UBU2 259 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms