RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 ZFHX4Q86UP3 3567 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 TNCP24821 2201 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ASCC3Q8N3C0 2202 aaKnown RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 IGKV2-40A0A087WW87 121 aaPredicted RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV1-45A0A0A0MS14 117 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV3-21A0A0B4J1V1 117 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV26-2A0A0B4J265 109 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM223A0PJW6 202 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 LRCOL1A6NCL2 159 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 C11orf86A6NJI1 115 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM223BA6NKX1 122 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 H7C1H1 209 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 M0R3E3 92 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 LST1O00453 97 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ENSAO43768 121 aaKnown RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 IGKV2D-40P01614 121 aaPredicted RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 IGKV1-16P04430 117 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 CCL3P10147 92 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 KRTAP5-9P26371 169 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 NBL1P41271 181 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ZNF80P51504 273 aaPredicted RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 RPL18AQ02543 176 aaKnown RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 WT1-ASQ06250 92 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ERCC8Q13216 396 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 C1orf195Q5TG92 126 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ZNF826PQ6ZT77 177 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 Q6ZT83 130 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 C5orf38Q86SI9 138 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC00643Q86TS7 51 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 RPS19BP1Q86WX3 136 aaKnown RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ZCCHC24Q8N2G6 241 aaKnown RBP1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM216BQ8N7L0 139 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 C8orf31Q8N9H6 132 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 WFDC11Q8NEX6 87 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 Q8TAT8 98 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 C10orf105Q8TEF2 133 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 CLEC2BQ92478 149 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 LEAP2Q969E1 77 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 EEF1AKMT3Q96AZ1 226 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 SMIM2Q9BVW6 85 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 CNFNQ9BYD5 112 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 IMUPQ9GZP8 106 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 C16orf95Q9H693 158 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 NDUFA4L2Q9NRX3 87 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 SPANXCQ9NY87 97 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 TMEM14CQ9P0S9 112 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ZNRD1Q9P1U0 126 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 PRO1854Q9UHT4 67 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 ICOSQ9Y6W8 199 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 V9GYY9 64 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 SPEGQ15772 3267 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 SEC16AO15027 2179 aa1.3□□□□□ -2.2
PTP4A1-204ENST00000578299 OBSCNQ5VST9 7968 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 DSCAMO60469 2012 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 TRBV19A0A075B6N1 114 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 A0A087WVE0 104 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV13-1A0A0B4J241 112 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV3-66A0A0C4DH42 116 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 IGKV3D-7A0A0C4DH55 119 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 TRBV30A0A0K0K1B3 111 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 C10orf142B7Z368 130 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 E7EUB6 86 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 H3BRN7 92 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 COX6A1P12074 109 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 UBE2E1P51965 193 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 SYNJ2BPP57105 145 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 NPC2P61916 151 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 VMA21Q3ZAQ7 101 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 ORMDL2Q53FV1 153 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 C6orf226Q5I0X4 101 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 Q6JHZ5 121 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 ZNF833PQ6ZTB9 187 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 FP248Q71RG6 208 aaPredicted RBP1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 FAM223AQ8IWN6 122 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 LINC00311Q8N616 119 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 SLC25A29Q8N8R3 303 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 RNASE6Q93091 150 aaKnown RBP1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 TOMM6Q96B49 74 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 RPL39LQ96EH5 51 aaKnown RBP1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 SCGB3A1Q96QR1 104 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 LCE3DQ9BYE3 92 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 DPH3P1Q9H4G8 78 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 MYO7AQ13402 2215 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 CNTRLQ7Z7A1 2325 aa1.29□□□□□ -2.2
PTP4A1-204ENST00000578299 FREM1Q5H8C1 2179 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 INTS1Q8N201 2190 aaKnown RBP1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 IGLV3-12A0A075B6K2 115 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 IGKV1D-17A0A075B6S4 117 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 TRAV8-3A0A0A6YYJ7 113 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 TRGV5A0A0B4J1U4 118 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 IGHV7-4-1A0A0J9YVY3 117 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 A0A0J9YX75 114 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 A0A0U1RQV1 116 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 IQCF6A8MYZ5 107 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 NDUFC2-KCTD14E9PQ53 114 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 I3L3M4 83 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 LHBP01229 141 aa1.28□□□□□ -2.2
PTP4A1-204ENST00000578299 ACYP1P07311 99 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms