RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 Q9HAA7 133 aa7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 FAM30AQ9NZY2 134 aa7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 DMBT1Q9UGM3 2413 aaPredicted RBP7.43□□□□□ -1.22
SMARCE1-214ENST00000578112 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 RNF222A6NCQ9 220 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 K7EN84 100 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 PAGE4O60829 102 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 IGLV2-8P01709 118 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 COA6Q5JTJ3 125 aaKnown RBP7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 GTF2H5Q6ZYL4 71 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 TVP23CQ96ET8 276 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 DNAJC30Q96LL9 226 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 MAP1LC3BQ9GZQ8 125 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 LAMTOR2Q9Y2Q5 125 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 IGHV3-30P01768 117 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 IGHV3-33P01772 117 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 IGHV3-30-3P0DP02 117 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 IGHV3-30-5P0DP03 117 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 ZNF506Q5JVG8 444 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 TMEM167BQ9NRX6 74 aa7.42□□□□□ -1.22
SMARCE1-214ENST00000578112 TCRAP04437 139 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 RPL12P30050 165 aaKnown RBP7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 FAM162BQ5T6X4 162 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 CYB561D1Q8N8Q1 229 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 GAGE12HA6NDE8 117 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 Q0VG73 95 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 PPP1R1CQ8WVI7 109 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 LINC00479Q96M42 142 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 TMEM126AQ9H061 195 aa7.41□□□□□ -1.22
SMARCE1-214ENST00000578112 HMGB3O15347 200 aaKnown RBP7.4□□□□□ -1.22
SMARCE1-214ENST00000578112 IGLV2-11P01706 119 aa7.4□□□□□ -1.22
SMARCE1-214ENST00000578112 OR13C6PQ8NH95 151 aa7.4□□□□□ -1.22
SMARCE1-214ENST00000578112 DERL1Q9BUN8 251 aa7.4□□□□□ -1.22
SMARCE1-214ENST00000578112 RNASE3P12724 160 aaKnown RBP7.4□□□□□ -1.23
SMARCE1-214ENST00000578112 DGAT2L7PQ6IED9 249 aa7.4□□□□□ -1.23
SMARCE1-214ENST00000578112 UFSP1Q6NVU6 142 aa7.4□□□□□ -1.23
SMARCE1-214ENST00000578112 OR10G7Q8NGN6 311 aa7.4□□□□□ -1.23
SMARCE1-214ENST00000578112 TMEM18Q96B42 140 aa7.4□□□□□ -1.23
SMARCE1-214ENST00000578112 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 GNG4P50150 75 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 SERF2P84101 59 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 LRRC37A5PQ49AS3 106 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 DPPA3Q6W0C5 159 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 CHAC1Q9BUX1 264 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 SMIM3Q9BZL3 60 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 CTDSP1Q9GZU7 261 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 IL36BQ9NZH7 164 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 ASIPP42127 132 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 EPDR1Q9UM22 224 aa7.39□□□□□ -1.23
SMARCE1-214ENST00000578112 HERC1Q15751 4861 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 BAALCQ8WXS3 180 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 NAT8BQ9UHF3 227 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 MYCBP2O75592 4640 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 CXorf1O96002 111 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 ATP6V0CP27449 155 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 GCHFRP30047 84 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 KRTAP10-4P60372 401 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 MEF2BQ02080 365 aaPredicted RBP7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 TMEM97Q5BJF2 176 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 SCXQ7RTU7 201 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 C11orf21Q9P2W6 132 aa7.38□□□□□ -1.23
SMARCE1-214ENST00000578112 FAT1Q14517 4588 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 RBFOX3A6NFN3 312 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 FABP5P3A8MUU1 101 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 J3QR89 54 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 TRGC1P0CF51 173 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 ARL14EPLP0DKL9 152 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 ZNF80P51504 273 aaPredicted RBP7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 H2BFSP57053 126 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 TEX43Q6ZNM6 134 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 S100A4P26447 101 aaKnown RBP7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 SULT1A2P50226 295 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 GNG5P63218 68 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 WFDC2Q14508 124 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 ANAPC13Q9BS18 74 aa7.37□□□□□ -1.23
SMARCE1-214ENST00000578112 TRBV6-1A0A0K0K1D8 114 aa7.36□□□□□ -1.23
SMARCE1-214ENST00000578112 GAGE12JA6NER3 117 aa7.36□□□□□ -1.23
SMARCE1-214ENST00000578112 HAMPP81172 84 aa7.36□□□□□ -1.23
SMARCE1-214ENST00000578112 GAGE4Q13068 117 aa7.36□□□□□ -1.23
SMARCE1-214ENST00000578112 GAGE13Q4V321 117 aa7.36□□□□□ -1.23
SMARCE1-214ENST00000578112 OR10G8Q8NGN5 311 aa7.36□□□□□ -1.23
SMARCE1-214ENST00000578112 UQCR10Q9UDW1 63 aa7.36□□□□□ -1.23
SMARCE1-214ENST00000578112 TINCRA0A1B0GVN0 87 aa7.35□□□□□ -1.23
SMARCE1-214ENST00000578112 HSBP1O75506 76 aa7.35□□□□□ -1.23
SMARCE1-214ENST00000578112 SRSF3P84103 164 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-214ENST00000578112 DAZ4Q86SG3 579 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-214ENST00000578112 DAZ3Q9NR90 486 aaKnown RBP7.35□□□□□ -1.23
SMARCE1-214ENST00000578112 B4DEV8 164 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 PRNTQ86SH4 94 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 BORCS7-ASMTA0A0B4J1R7 106 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 IGHV3-73A0A0B4J1V6 119 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 IGKV3D-20A0A0C4DH25 116 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 CXCL1P09341 107 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 AQP10Q96PS8 301 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 MAP1LC3AQ9H492 121 aa7.34□□□□□ -1.23
SMARCE1-214ENST00000578112 RPL36AP83881 106 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms