RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 FAM240AA0A1B0GVK7 77 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 CCL18P55774 89 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 ZFAND2AQ8N6M9 145 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 IGLV2-11P01706 119 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 DEFB113Q30KQ7 82 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 ZFAND3Q9H8U3 227 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 BPY2O14599 106 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 TRIAP1O43715 76 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 ZMAT4Q9H898 229 aa8.1□□□□□ -1.11
SEC22B-201ENST00000578049 CDKN2A-AS1Q9UH64 79 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 SERP2Q8N6R1 65 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 MAPKAPK5-AS1Q8N8E1 139 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 MUC7Q8TAX7 377 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 M0QY20 66 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 NDUFS5O43920 106 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 CRIP1P50238 77 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 IGLV10-54A0A075B6I4 117 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 SMIM9A6NGZ8 99 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 IGHV3-30P01768 117 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 IGHV3-30-5P0DP03 117 aa8.09□□□□□ -1.11
SEC22B-201ENST00000578049 RPL18AQ02543 176 aaKnown RBP8.09□□□□□ -1.11
SEC22B-201ENST00000578049 LST1O00453 97 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 C20orf197Q8N268 126 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 BDP1A6H8Y1 2624 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 LY6LH3BQJ8 138 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 MAP6D1Q9H9H5 199 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 Q9HAA7 133 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 C2CD3Q4AC94 2353 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 ALPK3Q96L96 1907 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 ADORA2A-AS1P86434 159 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 NDUFA7O95182 113 aa8.08□□□□□ -1.12
SEC22B-201ENST00000578049 COL4A4P53420 1690 aaPredicted RBP8.07□□□□□ -1.12
SEC22B-201ENST00000578049 CHKB-CPT1BH3BT56 60 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 V9GYY9 64 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 MED12LQ86YW9 2145 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 ARHGAP21Q5T5U3 1957 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 NRACQ8N912 160 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 PLXNB1O43157 2135 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 NCR3O14931 201 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 LMO4P61968 165 aa8.07□□□□□ -1.12
SEC22B-201ENST00000578049 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
SEC22B-201ENST00000578049 POLR2KP53803 58 aaKnown RBP8.06□□□□□ -1.12
SEC22B-201ENST00000578049 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
SEC22B-201ENST00000578049 MRPS36P82909 103 aaKnown RBP8.06□□□□□ -1.12
SEC22B-201ENST00000578049 C1orf229Q6ZS94 237 aaPredicted RBP8.06□□□□□ -1.12
SEC22B-201ENST00000578049 TRBV6-4A0A1B0GX49 114 aa8.05□□□□□ -1.12
SEC22B-201ENST00000578049 NOTCH2Q04721 2471 aa8.05□□□□□ -1.12
SEC22B-201ENST00000578049 LYRM9A8MSI8 78 aa8.05□□□□□ -1.12
SEC22B-201ENST00000578049 COX7CP15954 63 aa8.05□□□□□ -1.12
SEC22B-201ENST00000578049 ADAMTS9Q9P2N4 1935 aa8.05□□□□□ -1.12
SEC22B-201ENST00000578049 LINC00467Q9BRT7 94 aa8.05□□□□□ -1.12
SEC22B-201ENST00000578049 MRGPRG-AS1Q2M3A8 158 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 CSPG4Q6UVK1 2322 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 IGHV4-28A0A0C4DH34 117 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 MRPS12O15235 138 aaKnown RBP8.04□□□□□ -1.12
SEC22B-201ENST00000578049 J3QKU1 62 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 CEMP1Q6PRD7 247 aaPredicted RBP8.04□□□□□ -1.12
SEC22B-201ENST00000578049 LRRC75A-AS1Q8N1F1 130 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 LINC00310P59036 64 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 DEFB1P60022 68 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 KLK12Q9UKR0 248 aa8.04□□□□□ -1.12
SEC22B-201ENST00000578049 ZFHX2Q9C0A1 2572 aaPredicted RBP8.04□□□□□ -1.12
SEC22B-201ENST00000578049 A0A1W2PNU3 283 aaPredicted RBP8.03□□□□□ -1.12
SEC22B-201ENST00000578049 BRK1Q8WUW1 75 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 USP17L23D6RBM5 183 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 MYO18BQ8IUG5 2567 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 HIVEP2P31629 2446 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 FAM110AQ9BQ89 295 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 NAV3Q8IVL0 2385 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 TMEM131Q92545 1883 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 Q8N976 141 aa8.03□□□□□ -1.12
SEC22B-201ENST00000578049 CLPSL1A2RUU4 121 aa8.02□□□□□ -1.12
SEC22B-201ENST00000578049 KLLNB2CW77 178 aa8.02□□□□□ -1.12
SEC22B-201ENST00000578049 SMAD5-AS1Q9Y6J3 95 aa8.02□□□□□ -1.13
SEC22B-201ENST00000578049 SORL1Q92673 2214 aa8.02□□□□□ -1.13
SEC22B-201ENST00000578049 MUC6Q6W4X9 2439 aa8.02□□□□□ -1.13
SEC22B-201ENST00000578049 C14orf177Q52M58 125 aa8.02□□□□□ -1.13
SEC22B-201ENST00000578049 Q8N6K4 173 aa8.02□□□□□ -1.13
SEC22B-201ENST00000578049 Q6JHZ5 121 aa8.01□□□□□ -1.13
SEC22B-201ENST00000578049 XGP55808 180 aa8.01□□□□□ -1.13
SEC22B-201ENST00000578049 REG3AQ06141 175 aa8.01□□□□□ -1.13
SEC22B-201ENST00000578049 COX8CQ7Z4L0 72 aa8.01□□□□□ -1.13
SEC22B-201ENST00000578049 UBE2AP49459 152 aa8.01□□□□□ -1.13
SEC22B-201ENST00000578049 Q6ZTI0 123 aa8.01□□□□□ -1.13
SEC22B-201ENST00000578049 PRR14LQ5THK1 2151 aa8.01□□□□□ -1.13
SEC22B-201ENST00000578049 TSHBP01222 138 aa8□□□□□ -1.13
SEC22B-201ENST00000578049 UBE2D1P51668 147 aa8□□□□□ -1.13
SEC22B-201ENST00000578049 C20orf173Q96LM9 149 aa8□□□□□ -1.13
SEC22B-201ENST00000578049 TNRC6BQ9UPQ9 1833 aaKnown RBP8□□□□□ -1.13
SEC22B-201ENST00000578049 TRBV6-8A0A0A6YYG3 113 aa8□□□□□ -1.13
SEC22B-201ENST00000578049 DEFB114Q30KQ6 69 aa8□□□□□ -1.13
SEC22B-201ENST00000578049 C9orf85Q96MD7 179 aa8□□□□□ -1.13
SEC22B-201ENST00000578049 RNASE3P12724 160 aaKnown RBP8□□□□□ -1.13
SEC22B-201ENST00000578049 CHCHD10Q8WYQ3 142 aaPredicted RBP7.99□□□□□ -1.13
SEC22B-201ENST00000578049 DSCAML1Q8TD84 2053 aa7.99□□□□□ -1.13
SEC22B-201ENST00000578049 SONP18583 2426 aaKnown RBP7.99□□□□□ -1.13
SEC22B-201ENST00000578049 ENHOQ6UWT2 76 aa7.99□□□□□ -1.13
SEC22B-201ENST00000578049 Q8NA96 180 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms