RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 TMEM243Q9BU79 118 aa9.9□□□□□ -0.82
NPLOC4-209ENST00000572760 LAMTOR2Q9Y2Q5 125 aa9.9□□□□□ -0.82
NPLOC4-209ENST00000572760 TRAPPC1Q9Y5R8 145 aa9.9□□□□□ -0.82
NPLOC4-209ENST00000572760 TRBV27A0A0K0K1C4 114 aa9.89□□□□□ -0.83
NPLOC4-209ENST00000572760 IQCJQ1A5X6 159 aa9.89□□□□□ -0.83
NPLOC4-209ENST00000572760 LINC01556Q5JQF7 62 aa9.89□□□□□ -0.83
NPLOC4-209ENST00000572760 MAP1LC3AQ9H492 121 aa9.89□□□□□ -0.83
NPLOC4-209ENST00000572760 VPS13DQ5THJ4 4388 aa9.89□□□□□ -0.83
NPLOC4-209ENST00000572760 LOC389332A0A1B0GUA5 103 aa9.88□□□□□ -0.83
NPLOC4-209ENST00000572760 S100A1P23297 94 aa9.88□□□□□ -0.83
NPLOC4-209ENST00000572760 GAGE6Q13070 117 aa9.88□□□□□ -0.83
NPLOC4-209ENST00000572760 NIT1Q86X76 327 aa9.88□□□□□ -0.83
NPLOC4-209ENST00000572760 C10orf126Q8N4M7 172 aa9.88□□□□□ -0.83
NPLOC4-209ENST00000572760 SMIM2Q9BVW6 85 aa9.88□□□□□ -0.83
NPLOC4-209ENST00000572760 LYSTQ99698 3801 aa9.87□□□□□ -0.83
NPLOC4-209ENST00000572760 K7EP13 123 aa9.87□□□□□ -0.83
NPLOC4-209ENST00000572760 ATP6V1G1O75348 118 aa9.87□□□□□ -0.83
NPLOC4-209ENST00000572760 RPL32P62910 135 aaKnown RBP9.87□□□□□ -0.83
NPLOC4-209ENST00000572760 DNAH1Q9P2D7 4330 aa9.87□□□□□ -0.83
NPLOC4-209ENST00000572760 TCAPO15273 167 aa9.86□□□□□ -0.83
NPLOC4-209ENST00000572760 TSHBP01222 138 aa9.86□□□□□ -0.83
NPLOC4-209ENST00000572760 Q6ZR54 194 aa9.86□□□□□ -0.83
NPLOC4-209ENST00000572760 YPEL4Q96NS1 127 aa9.86□□□□□ -0.83
NPLOC4-209ENST00000572760 CHCHD7Q9BUK0 85 aa9.86□□□□□ -0.83
NPLOC4-209ENST00000572760 SCO1O75880 301 aa9.85□□□□□ -0.83
NPLOC4-209ENST00000572760 RAB5AP20339 215 aa9.85□□□□□ -0.83
NPLOC4-209ENST00000572760 AMMECR1LQ6DCA0 310 aa9.85□□□□□ -0.83
NPLOC4-209ENST00000572760 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-209ENST00000572760 IGKV2-29A2NJV5 120 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-209ENST00000572760 MPV17L2Q567V2 206 aa9.84□□□□□ -0.83
NPLOC4-209ENST00000572760 C1orf134Q5TEV5 83 aa9.84□□□□□ -0.83
NPLOC4-209ENST00000572760 Q8N3U1 123 aa9.84□□□□□ -0.83
NPLOC4-209ENST00000572760 ALKBH7Q9BT30 221 aaPredicted RBP9.84□□□□□ -0.83
NPLOC4-209ENST00000572760 SACSQ9NZJ4 4579 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 PRSS47A8MTI9 375 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 H7C423 109 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 ANGP03950 147 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 RNASEKQ6P5S7 137 aaKnown RBP9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 C6orf223Q8N319 242 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 Q8N8P6 123 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 Q8N976 141 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 TMEM18Q96B42 140 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 KRTAP1-5Q9BYS1 174 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 KLK12Q9UKR0 248 aa9.83□□□□□ -0.84
NPLOC4-209ENST00000572760 ESDP10768 282 aa9.82□□□□□ -0.84
NPLOC4-209ENST00000572760 RBX1P62877 108 aa9.82□□□□□ -0.84
NPLOC4-209ENST00000572760 PRSS3P2Q8NHM4 247 aa9.82□□□□□ -0.84
NPLOC4-209ENST00000572760 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
NPLOC4-209ENST00000572760 IBA57-AS1B1ANH7 110 aa9.81□□□□□ -0.84
NPLOC4-209ENST00000572760 CRPP02741 224 aa9.81□□□□□ -0.84
NPLOC4-209ENST00000572760 FGF6P10767 208 aa9.81□□□□□ -0.84
NPLOC4-209ENST00000572760 SMAGPQ0VAQ4 97 aa9.81□□□□□ -0.84
NPLOC4-209ENST00000572760 DGAT2L7PQ6IED9 249 aa9.81□□□□□ -0.84
NPLOC4-209ENST00000572760 TMEM101Q96IK0 257 aa9.81□□□□□ -0.84
NPLOC4-209ENST00000572760 Q9HAA7 133 aa9.81□□□□□ -0.84
NPLOC4-209ENST00000572760 A0A1B0GUV1 79 aa9.8□□□□□ -0.84
NPLOC4-209ENST00000572760 COLCA2A8K830 154 aa9.8□□□□□ -0.84
NPLOC4-209ENST00000572760 BTF3P20290 206 aaKnown RBP9.8□□□□□ -0.84
NPLOC4-209ENST00000572760 IFI27P40305 119 aaPredicted RBP9.8□□□□□ -0.84
NPLOC4-209ENST00000572760 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
NPLOC4-209ENST00000572760 UBE2WQ96B02 151 aa9.8□□□□□ -0.84
NPLOC4-209ENST00000572760 DNAH6Q9C0G6 4158 aa9.8□□□□□ -0.84
NPLOC4-209ENST00000572760 KMT2CQ8NEZ4 4911 aaKnown RBP9.79□□□□□ -0.84
NPLOC4-209ENST00000572760 TRAV8-3A0A0A6YYJ7 113 aa9.79□□□□□ -0.84
NPLOC4-209ENST00000572760 LAGE3Q14657 143 aa9.79□□□□□ -0.84
NPLOC4-209ENST00000572760 ORMDL2Q53FV1 153 aa9.79□□□□□ -0.84
NPLOC4-209ENST00000572760 FA2HQ7L5A8 372 aa9.79□□□□□ -0.84
NPLOC4-209ENST00000572760 C20orf203Q8NBC4 194 aa9.79□□□□□ -0.84
NPLOC4-209ENST00000572760 KMT2AQ03164 3969 aa9.79□□□□□ -0.84
NPLOC4-209ENST00000572760 K7EMI3 77 aa9.78□□□□□ -0.84
NPLOC4-209ENST00000572760 TRGC2P03986 189 aa9.78□□□□□ -0.84
NPLOC4-209ENST00000572760 ZNF25P17030 456 aaPredicted RBP9.78□□□□□ -0.84
NPLOC4-209ENST00000572760 Q0VG73 95 aa9.78□□□□□ -0.84
NPLOC4-209ENST00000572760 OR5A1Q8NGJ0 315 aa9.78□□□□□ -0.84
NPLOC4-209ENST00000572760 RMI2Q96E14 147 aa9.78□□□□□ -0.84
NPLOC4-209ENST00000572760 IGLV4-60A0A075B6I1 120 aa9.77□□□□□ -0.85
NPLOC4-209ENST00000572760 G0S2P27469 103 aa9.77□□□□□ -0.85
NPLOC4-209ENST00000572760 CLPSL2Q6UWE3 100 aa9.77□□□□□ -0.85
NPLOC4-209ENST00000572760 LINC00269Q8N2A0 174 aa9.77□□□□□ -0.85
NPLOC4-209ENST00000572760 PSCAO43653 123 aa9.76□□□□□ -0.85
NPLOC4-209ENST00000572760 C18orf32Q8TCD1 76 aa9.76□□□□□ -0.85
NPLOC4-209ENST00000572760 TM2D2Q9BX73 214 aa9.76□□□□□ -0.85
NPLOC4-209ENST00000572760 IGKV2D-24A0A075B6R9 120 aa9.75□□□□□ -0.85
NPLOC4-209ENST00000572760 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
NPLOC4-209ENST00000572760 RAB5BP61020 215 aa9.75□□□□□ -0.85
NPLOC4-209ENST00000572760 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-209ENST00000572760 REG3AQ06141 175 aa9.75□□□□□ -0.85
NPLOC4-209ENST00000572760 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
NPLOC4-209ENST00000572760 CYSLTR1Q9Y271 337 aa9.75□□□□□ -0.85
NPLOC4-209ENST00000572760 RTL8CO15255 209 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 MIAQ16674 131 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 ENHOQ6UWT2 76 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 C2orf66Q6UXQ4 117 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 LINC00336Q6ZUF6 198 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 TIMM21Q9BVV7 248 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 C1orf43Q9BWL3 253 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 SPANXA1Q9NS26 97 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 UBE2D4Q9Y2X8 147 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 HYDINQ4G0P3 5121 aa9.74□□□□□ -0.85
NPLOC4-209ENST00000572760 AP5S1Q9NUS5 200 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms