RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 IGHV3-23P01764 117 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 MT-ND4LP03901 98 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 P0C879 139 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 DEFA4P12838 97 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST1H2BOP23527 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST1H2BBP33778 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 SNCAP37840 140 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST1H2BDP58876 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 TPPP2P59282 170 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST1H2BCP62807 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 CCL20P78556 96 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 CXCL6P80162 114 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 PRCDQ00LT1 54 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 MEF2BQ02080 365 aaPredicted RBP2.39□□□□□ -2.03
CDC27-213ENST00000571643 HSD52Q0P140 79 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST2H2BEQ16778 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 MPV17L2Q567V2 206 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 PYDC2Q56P42 97 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.39□□□□□ -2.03
CDC27-213ENST00000571643 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 C10orf99Q6UWK7 81 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST1H2BHQ93079 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST1H2BNQ99877 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 HIST1H2BMQ99879 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 GGTLC1Q9BX51 225 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 FXYD6Q9H0Q3 95 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 NAA60Q9H7X0 242 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 ZNF355PQ9NSJ1 428 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 MRPS16Q9Y3D3 137 aaKnown RBP2.39□□□□□ -2.03
CDC27-213ENST00000571643 V9GYH0 126 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 NBEAL1Q6ZS30 2694 aa2.39□□□□□ -2.03
CDC27-213ENST00000571643 DNHD1Q96M86 4753 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 C9JCJ5 164 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 PLA2G10O15496 165 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 ZNF73O43830 326 aaPredicted RBP2.38□□□□□ -2.03
CDC27-213ENST00000571643 ZNF253O75346 499 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 NDUFB6O95139 128 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 SLC25A4P12235 298 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 CRISP2P16562 243 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 S100A4P26447 101 aaKnown RBP2.38□□□□□ -2.03
CDC27-213ENST00000571643 AKR1C2P52895 323 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 CMC4P56277 68 aaPredicted RBP2.38□□□□□ -2.03
CDC27-213ENST00000571643 TAS2R45P59539 299 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 MEIG1Q5JSS6 88 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 MORN3Q6PF18 240 aaPredicted RBP2.38□□□□□ -2.03
CDC27-213ENST00000571643 LCN15Q6UWW0 184 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 LINC00305Q7Z4B0 112 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 ORMDL3Q8N138 153 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 FER1L6-AS1Q8NA97 138 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 CIB3Q96Q77 187 aaPredicted RBP2.38□□□□□ -2.03
CDC27-213ENST00000571643 FAM103A1Q9BTL3 118 aaKnown RBP2.38□□□□□ -2.03
CDC27-213ENST00000571643 RPRMQ9NS64 109 aa2.38□□□□□ -2.03
CDC27-213ENST00000571643 CUBNO60494 3623 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 SORL1Q92673 2214 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 OR2T8A6NH00 312 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 A8MWL6 223 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 E7EUB6 86 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 NDUFA4O00483 81 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 SFT2D2O95562 160 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 CFDP00746 253 aaPredicted RBP2.37□□□□□ -2.03
CDC27-213ENST00000571643 IGKV1-39P01597 117 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 IGKV1-5P01602 117 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 IGLV1-51P01701 117 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 IGKV1D-39P04432 117 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 OR5AC1P0C628 307 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 FABP2P12104 132 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 IL7P13232 177 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 TMEM258P61165 79 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 YPEL3P61236 119 aaPredicted RBP2.37□□□□□ -2.03
CDC27-213ENST00000571643 WT1-ASQ06250 92 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 C2orf83Q53S99 150 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 NMSQ5H8A3 153 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 CLLU1Q5K131 121 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 CEMP1Q6PRD7 247 aaPredicted RBP2.37□□□□□ -2.03
CDC27-213ENST00000571643 AMTNQ6UX39 209 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 TMEM183AQ8IXX5 376 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 RPP25LQ8N5L8 163 aaKnown RBP2.37□□□□□ -2.03
CDC27-213ENST00000571643 COPS9Q8WXC6 57 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 MIEN1Q9BRT3 115 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 MRPL32Q9BYC8 188 aaKnown RBP2.37□□□□□ -2.03
CDC27-213ENST00000571643 MED9Q9NWA0 146 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 C21orf62Q9NYP8 219 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 FUT9Q9Y231 359 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 ANK2Q01484 3957 aa2.37□□□□□ -2.03
CDC27-213ENST00000571643 TRAV2A0A0B4J234 112 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 TRAV13-1A0A0B4J241 112 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 TRAV3A0A0B4J244 114 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 IGHV3-66A0A0C4DH42 116 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 C7orf71A4D174 169 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 A8MWV9 139 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 C1orf196B1AJZ1 125 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 FNDC10F2Z333 226 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 H3BMG7 143 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 I3L2K1 104 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 K7EIM0 57 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 M0R378 163 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 LYRM1O43325 122 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 PITX3O75364 302 aa2.36□□□□□ -2.03
CDC27-213ENST00000571643 PRM2P04554 102 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms