RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 MAP1LC3B2A6NCE7 125 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 SCGB1D1O95968 90 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 IGKV2D-40P01614 121 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 P01737 135 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 STAG3L2P0CL84 134 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 STAG3L3P0CL85 134 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 GCHFRP30047 84 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 AMTP48728 403 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 FHITP49789 147 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 UBE2G2P60604 165 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 PEA15Q15121 130 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 CST9LP1Q5W188 147 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 CLPSL2Q6UWE3 100 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 LINC00269Q8N2A0 174 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 SVBPQ8N300 66 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 C14orf178Q8N769 122 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 C15orf56Q8N910 161 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 FXYD5Q96DB9 178 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 FAM167A-AS1Q96KT0 104 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 MAP1LC3BQ9GZQ8 125 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 PARLQ9H300 379 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 TREM1Q9NP99 234 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 TMEM167BQ9NRX6 74 aa3.8□□□□□ -1.8
HERPUD1-217ENST00000569429 TRBV6-8A0A0A6YYG3 113 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 F8W036 122 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 K7EQM0 130 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 NDUFB4O95168 129 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 SNAPINO95295 136 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 APOC3P02656 99 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 PDE6HQ13956 83 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 ZNF506Q5JVG8 444 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 PRR27Q6MZM9 219 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 LINC00337Q8N6G1 96 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 SGK494Q96LW2 274 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 SEC11CQ9BY50 192 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 NAGKQ9UJ70 344 aa3.79□□□□□ -1.8
HERPUD1-217ENST00000569429 A0A1W2PNN7 141 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 F6UZH7 168 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 PAGE4O60829 102 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 GNG5P63218 68 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 CTAG1AP78358 180 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 ZNF726P1Q15940 193 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 GOLT1AQ6ZVE7 132 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 KCNS1Q96KK3 526 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 OTORQ9NRC9 128 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 GNG13Q9P2W3 67 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 LENEPQ9Y5L5 61 aa3.78□□□□□ -1.8
HERPUD1-217ENST00000569429 A8MWV9 139 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 IFNA1P01562 189 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 TAGLN2P37802 199 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 UBE2D3P61077 147 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 UBE2G1P62253 170 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 UBE2D2P62837 147 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 RBX1P62877 108 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 REG3AQ06141 175 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 C10orf91Q5T1B1 145 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 UFSP1Q6NVU6 142 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 PRNTQ86SH4 94 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 TYMSOSQ8TAI1 123 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 MBD3L1Q8WWY6 194 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 NDFIP1Q9BT67 221 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 NKX6-2Q9C056 277 aaPredicted RBP3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 EIF5A2Q9GZV4 153 aaKnown RBP3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 EPDR1Q9UM22 224 aa3.77□□□□□ -1.81
HERPUD1-217ENST00000569429 TRAV34A0A0B4J273 112 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 A0A1W2PRE2 83 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 RBAKDNA6NC62 111 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 C9orf118A6NHY6 69 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 F5H697 171 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 TCRAP04437 139 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 CFC1P0CG37 223 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 CEBPGP53567 150 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 CCL20P78556 96 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 HIGD2BQ4VC39 106 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 PIK3CD-AS1Q5SR53 167 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 PHF5AQ7RTV0 110 aaKnown RBP3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 C5orf17Q8NAS9 161 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 CHCHD5Q9BSY4 110 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 PSG8Q9UQ74 426 aa3.76□□□□□ -1.81
HERPUD1-217ENST00000569429 TRBV7-3A0A075B6L6 115 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 A0A087X002 238 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 GVQW2A0A096LPI5 108 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 TRAV21A0A0B4J279 112 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 TRBV10-1A0A0K0K1A3 114 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 SERTM2A0A1B0GWG4 89 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 FAM74A7A6NL05 159 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 AKR1C3P42330 323 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 RPL36AP83881 106 aaKnown RBP3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 FLI1Q01543 452 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 ZNF674Q2M3X9 581 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 C9orf116Q5BN46 136 aaPredicted RBP3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 SAPCD1Q5SSQ6 148 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 RPL36ALQ969Q0 106 aaKnown RBP3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 CTDSP1Q9GZU7 261 aa3.75□□□□□ -1.81
HERPUD1-217ENST00000569429 PEX7O00628 323 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 SCO1O75880 301 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 TSHBP01222 138 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 RHEBQ15382 184 aa3.74□□□□□ -1.81
HERPUD1-217ENST00000569429 SS18Q15532 418 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms