RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 FAM104BQ5XKR9 115 aa14.41□□□□□ -0.1
NME3-210ENST00000567271 MRPL54Q6P161 138 aaKnown RBP14.41□□□□□ -0.1
NME3-210ENST00000567271 COMMD7Q86VX2 200 aa14.41□□□□□ -0.1
NME3-210ENST00000567271 A0A1B0GXF2 115 aa14.4□□□□□ -0.1
NME3-210ENST00000567271 ANGP03950 147 aaKnown RBP14.4□□□□□ -0.1
NME3-210ENST00000567271 RPS10P46783 165 aaKnown RBP14.4□□□□□ -0.1
NME3-210ENST00000567271 AMTP48728 403 aa14.4□□□□□ -0.1
NME3-210ENST00000567271 ENHOQ6UWT2 76 aa14.4□□□□□ -0.1
NME3-210ENST00000567271 ST20Q9HBF5 79 aa14.4□□□□□ -0.1
NME3-210ENST00000567271 F8W036 122 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 SMKR1H3BMG3 65 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 NCR2O95944 276 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 S100A8P05109 93 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 HBBP68871 147 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 Q0VG73 95 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 RMI2Q96E14 147 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 PGPEP1Q9NXJ5 209 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 COX11Q9Y6N1 276 aa14.39□□□□□ -0.11
NME3-210ENST00000567271 APOBP04114 4563 aaKnown RBP14.39□□□□□ -0.11
NME3-210ENST00000567271 LINC00862A6NCI5 91 aa14.38□□□□□ -0.11
NME3-210ENST00000567271 I3L3M4 83 aa14.38□□□□□ -0.11
NME3-210ENST00000567271 MRPL51Q4U2R6 128 aaKnown RBP14.38□□□□□ -0.11
NME3-210ENST00000567271 TMEM70Q9BUB7 260 aa14.38□□□□□ -0.11
NME3-210ENST00000567271 IGKV2D-24A0A075B6R9 120 aa14.37□□□□□ -0.11
NME3-210ENST00000567271 PMCHP20382 165 aa14.37□□□□□ -0.11
NME3-210ENST00000567271 POLR2KP53803 58 aaKnown RBP14.37□□□□□ -0.11
NME3-210ENST00000567271 ATP5L2Q7Z4Y8 100 aa14.37□□□□□ -0.11
NME3-210ENST00000567271 A0A1B0GUV1 79 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 UBE2L6O14933 153 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 PPP1R17O96001 155 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 CRPP02741 224 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 MAPKAPK5-AS1Q8N8E1 139 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 NRACQ8N912 160 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 SEC11CQ9BY50 192 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 PRR34Q9NV39 138 aa14.36□□□□□ -0.11
NME3-210ENST00000567271 APCSP02743 223 aa14.35□□□□□ -0.11
NME3-210ENST00000567271 LINC00269Q8N2A0 174 aa14.35□□□□□ -0.11
NME3-210ENST00000567271 TRBV27A0A0K0K1C4 114 aa14.34□□□□□ -0.11
NME3-210ENST00000567271 FUSP35637 526 aaKnown RBP eCLIP14.34□□□□□ -0.11
NME3-210ENST00000567271 CDPF1Q6NVV7 123 aa14.34□□□□□ -0.11
NME3-210ENST00000567271 C20orf203Q8NBC4 194 aa14.34□□□□□ -0.11
NME3-210ENST00000567271 IGLV4-60A0A075B6I1 120 aa14.33□□□□□ -0.12
NME3-210ENST00000567271 TSHBP01222 138 aa14.33□□□□□ -0.12
NME3-210ENST00000567271 CKS2P33552 79 aa14.33□□□□□ -0.12
NME3-210ENST00000567271 WFDC2Q14508 124 aa14.33□□□□□ -0.12
NME3-210ENST00000567271 MIAQ16674 131 aa14.33□□□□□ -0.12
NME3-210ENST00000567271 Q8N814 137 aa14.33□□□□□ -0.12
NME3-210ENST00000567271 C1orf43Q9BWL3 253 aa14.33□□□□□ -0.12
NME3-210ENST00000567271 H7C423 109 aa14.32□□□□□ -0.12
NME3-210ENST00000567271 VCYO14598 125 aa14.32□□□□□ -0.12
NME3-210ENST00000567271 BAALCQ8WXS3 180 aa14.32□□□□□ -0.12
NME3-210ENST00000567271 TMEM242Q9NWH2 141 aa14.32□□□□□ -0.12
NME3-210ENST00000567271 SUMO2P61956 95 aaKnown RBP14.31□□□□□ -0.12
NME3-210ENST00000567271 CLPSL2Q6UWE3 100 aa14.31□□□□□ -0.12
NME3-210ENST00000567271 HSPG2P98160 4391 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 TRBV24-1A0A075B6N3 115 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.3□□□□□ -0.12
NME3-210ENST00000567271 IGKV2-29A2NJV5 120 aaPredicted RBP14.3□□□□□ -0.12
NME3-210ENST00000567271 ESDP10768 282 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 REG3AQ06141 175 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 C10orf91Q5T1B1 145 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 BTF3L4Q96K17 158 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 IMMP2LQ96T52 175 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 CTDSP1Q9GZU7 261 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 DNAH8Q96JB1 4490 aa14.3□□□□□ -0.12
NME3-210ENST00000567271 D6R8Y8 96 aa14.29□□□□□ -0.12
NME3-210ENST00000567271 LECT2O14960 151 aa14.29□□□□□ -0.12
NME3-210ENST00000567271 NTN5Q8WTR8 489 aaPredicted RBP14.29□□□□□ -0.12
NME3-210ENST00000567271 C20orf78Q9BR46 151 aa14.29□□□□□ -0.12
NME3-210ENST00000567271 TNFRSF6BO95407 300 aa14.28□□□□□ -0.12
NME3-210ENST00000567271 AMMECR1LQ6DCA0 310 aa14.28□□□□□ -0.12
NME3-210ENST00000567271 PPBPP02775 128 aa14.27□□□□□ -0.13
NME3-210ENST00000567271 FGF6P10767 208 aa14.27□□□□□ -0.13
NME3-210ENST00000567271 CARHSP1Q9Y2V2 147 aaKnown RBP14.27□□□□□ -0.13
NME3-210ENST00000567271 RPL32P62910 135 aaKnown RBP14.26□□□□□ -0.13
NME3-210ENST00000567271 RNASEKQ6P5S7 137 aaKnown RBP14.26□□□□□ -0.13
NME3-210ENST00000567271 KRTAP26-1Q6PEX3 210 aa14.26□□□□□ -0.13
NME3-210ENST00000567271 KIR2DL4Q99706 377 aa14.26□□□□□ -0.13
NME3-210ENST00000567271 IGLV5-52A0A0A0MRZ9 124 aa14.25□□□□□ -0.13
NME3-210ENST00000567271 PHOX2AO14813 284 aa14.25□□□□□ -0.13
NME3-210ENST00000567271 FCER1GP30273 86 aa14.25□□□□□ -0.13
NME3-210ENST00000567271 TMEM136Q6ZRR5 245 aa14.25□□□□□ -0.13
NME3-210ENST00000567271 TRAV8-4A0A0B4J246 113 aa14.24□□□□□ -0.13
NME3-210ENST00000567271 CDK2AP2O75956 126 aa14.24□□□□□ -0.13
NME3-210ENST00000567271 NPYP01303 97 aa14.24□□□□□ -0.13
NME3-210ENST00000567271 ZNF25P17030 456 aaPredicted RBP14.24□□□□□ -0.13
NME3-210ENST00000567271 ORMDL3Q8N138 153 aa14.24□□□□□ -0.13
NME3-210ENST00000567271 IGLV10-54A0A075B6I4 117 aa14.23□□□□□ -0.13
NME3-210ENST00000567271 C7orf77A4D0Y5 90 aa14.23□□□□□ -0.13
NME3-210ENST00000567271 GCSHP23434 173 aa14.23□□□□□ -0.13
NME3-210ENST00000567271 KRTAP10-1P60331 282 aa14.22□□□□□ -0.13
NME3-210ENST00000567271 TMEM101Q96IK0 257 aa14.22□□□□□ -0.13
NME3-210ENST00000567271 PRELID3AQ96N28 172 aa14.22□□□□□ -0.13
NME3-210ENST00000567271 SMIM2Q9BVW6 85 aa14.22□□□□□ -0.13
NME3-210ENST00000567271 TRAV9-1A0A075B6T8 112 aa14.21□□□□□ -0.13
NME3-210ENST00000567271 HLA-DQA1P01909 254 aa14.21□□□□□ -0.13
NME3-210ENST00000567271 MRPL52Q86TS9 123 aaKnown RBP14.21□□□□□ -0.13
NME3-210ENST00000567271 CLRN3Q8NCR9 226 aa14.21□□□□□ -0.13
NME3-210ENST00000567271 RHEBQ15382 184 aa14.2□□□□□ -0.14
NME3-210ENST00000567271 OR5A1Q8NGJ0 315 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms