RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 DEFB112Q30KQ8 113 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 NTN5Q8WTR8 489 aaPredicted RBP4.78□□□□□ -1.64
GINS3-206ENST00000567143 CDIP1Q9H305 208 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 PRO1854Q9UHT4 67 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 OTOGQ6ZRI0 2925 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 IGKV3OR2-268A0A0C4DH90 116 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 IGHV3-53P01767 116 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 IGHG2P01859 326 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 UBE2D1P51668 147 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 DEFB131AP59861 70 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 SNRPD3P62318 126 aaKnown RBP4.78□□□□□ -1.64
GINS3-206ENST00000567143 APRG1Q8IVJ8 170 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 C10orf126Q8N4M7 172 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 DCANP1Q8TF63 244 aa4.78□□□□□ -1.64
GINS3-206ENST00000567143 HECTD1Q9ULT8 2610 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 TEX49A0A1B0GTD5 131 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 M0QY20 66 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 IGHV4-31P0DP07 118 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 CR1P17927 2039 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 SLC25A20O43772 301 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 EIF4EBP3O60516 100 aaPredicted RBP4.77□□□□□ -1.65
GINS3-206ENST00000567143 SLURP1P55000 103 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 Q6ZUT4 128 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 USMG5Q96IX5 58 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 LENEPQ9Y5L5 61 aa4.77□□□□□ -1.65
GINS3-206ENST00000567143 IGHV4OR15-8A0A075B7B6 117 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 IGHV1OR15-1A0A075B7D0 117 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 A0A087WW49 117 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 A0A1W2PRX2 142 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 KLLNB2CW77 178 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 MSMBP08118 114 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 C3orf56Q8N813 242 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 SLC25A29Q8N8R3 303 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 WFDC11Q8NEX6 87 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 CLEC2BQ92478 149 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 SPATA25Q9BR10 227 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 PRSS47A8MTI9 375 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 NDUFA7O95182 113 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 RBMY1A1P0DJD3 496 aaKnown RBP4.76□□□□□ -1.65
GINS3-206ENST00000567143 RBMY1CP0DJD4 496 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 ZNF22P17026 224 aaPredicted RBP4.76□□□□□ -1.65
GINS3-206ENST00000567143 RBMY1FQ15415 496 aaKnown RBP4.76□□□□□ -1.65
GINS3-206ENST00000567143 UBE2E2Q96LR5 201 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 VWFP04275 2813 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 A6NDX4 124 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 CRYBA4P53673 196 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 CFHR3Q02985 330 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 ADAMTSL4-AS1Q5T5F5 129 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 Q6ZSN1 163 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 TEN1Q86WV5 123 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 RNF183Q96D59 192 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 Q96MF0 132 aa4.76□□□□□ -1.65
GINS3-206ENST00000567143 ANK3Q12955 4377 aaKnown RBP4.75□□□□□ -1.65
GINS3-206ENST00000567143 IGLV4-3A0A075B6K6 122 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 A0A0J9YX75 114 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 RHODO00212 210 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 PPP1R17O96001 155 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 IGHV3-30-3P0DP02 117 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 HOXD3P31249 432 aaPredicted RBP4.75□□□□□ -1.65
GINS3-206ENST00000567143 TCTEX1D4Q5JR98 221 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 LINC01356Q8N9X3 169 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 PPDPFLQ8WWR9 84 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 TIMM21Q9BVV7 248 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 XCL2Q9UBD3 114 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 TNFRSF18Q9Y5U5 241 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 C19orf54Q5BKX5 351 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 C20orf203Q8NBC4 194 aa4.75□□□□□ -1.65
GINS3-206ENST00000567143 TRAV13-1A0A0B4J241 112 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 TRBV27A0A0K0K1C4 114 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 CRLF1O75462 422 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 UBE2D3P61077 147 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 UBE2D2P62837 147 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 DGAT2L7PQ6IED9 249 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 AMELXQ99217 191 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 NDUFA12Q9UI09 145 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 FASNP49327 2511 aaKnown RBP4.74□□□□□ -1.65
GINS3-206ENST00000567143 B4DSR2 109 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 I3L3M4 83 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 IGHV3-33P01772 117 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 TTC32Q5I0X7 151 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 TMEM141Q96I45 108 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 FAM19A4Q96LR4 140 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 LINC01587Q99440 93 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 ANAPC13Q9BS18 74 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 SS18L2Q9UHA2 77 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 A0A0J9YXY3 114 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 TMEM223A0PJW6 202 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 TRIAP1O43715 76 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 PAPPA-AS1Q5QFB9 102 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 TIMM17AQ99595 171 aa4.74□□□□□ -1.65
GINS3-206ENST00000567143 TRAV4A0A0B4J268 109 aa4.73□□□□□ -1.65
GINS3-206ENST00000567143 LYRM7Q5U5X0 104 aa4.73□□□□□ -1.65
GINS3-206ENST00000567143 B5MCH6 92 aa4.73□□□□□ -1.65
GINS3-206ENST00000567143 IGLV1-40P01703 118 aa4.73□□□□□ -1.65
GINS3-206ENST00000567143 ATRQ13535 2644 aa4.73□□□□□ -1.65
GINS3-206ENST00000567143 TEP1Q99973 2627 aaKnown RBP4.73□□□□□ -1.65
GINS3-206ENST00000567143 LGALS9O00182 355 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 LY6G6DO95868 133 aa4.72□□□□□ -1.65
GINS3-206ENST00000567143 TMEM61Q8N0U2 210 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms