RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 TCAPO15273 167 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 POLR2KP53803 58 aaKnown RBP11.41□□□□□ -0.58
CLN6-208ENST00000567060 SUMO2P61956 95 aaKnown RBP11.41□□□□□ -0.58
CLN6-208ENST00000567060 COTL1Q14019 142 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 IQCJQ1A5X6 159 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 LINC01556Q5JQF7 62 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 LINC00336Q6ZUF6 198 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 NRACQ8N912 160 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 TMEM70Q9BUB7 260 aa11.41□□□□□ -0.58
CLN6-208ENST00000567060 IGHV1-24A0A0C4DH33 117 aa11.4□□□□□ -0.58
CLN6-208ENST00000567060 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.58
CLN6-208ENST00000567060 D6R8Y8 96 aa11.4□□□□□ -0.58
CLN6-208ENST00000567060 VCYO14598 125 aa11.4□□□□□ -0.58
CLN6-208ENST00000567060 TNFRSF6BO95407 300 aa11.39□□□□□ -0.59
CLN6-208ENST00000567060 RPS10P46783 165 aaKnown RBP11.39□□□□□ -0.59
CLN6-208ENST00000567060 WFDC10BQ8IUB3 73 aa11.39□□□□□ -0.59
CLN6-208ENST00000567060 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
CLN6-208ENST00000567060 PMCHP20382 165 aa11.38□□□□□ -0.59
CLN6-208ENST00000567060 ATRAIDQ6UW56 229 aa11.38□□□□□ -0.59
CLN6-208ENST00000567060 Q6ZR54 194 aa11.38□□□□□ -0.59
CLN6-208ENST00000567060 PRELID3AQ96N28 172 aa11.38□□□□□ -0.59
CLN6-208ENST00000567060 KIR2DL4Q99706 377 aa11.38□□□□□ -0.59
CLN6-208ENST00000567060 SMKR1H3BMG3 65 aa11.37□□□□□ -0.59
CLN6-208ENST00000567060 H7C423 109 aa11.37□□□□□ -0.59
CLN6-208ENST00000567060 GAS8-AS1O95177 125 aa11.37□□□□□ -0.59
CLN6-208ENST00000567060 APCSP02743 223 aa11.37□□□□□ -0.59
CLN6-208ENST00000567060 NTM-AS1Q6ZSK4 140 aa11.37□□□□□ -0.59
CLN6-208ENST00000567060 NIT1Q86X76 327 aa11.37□□□□□ -0.59
CLN6-208ENST00000567060 YPEL4Q96NS1 127 aa11.37□□□□□ -0.59
CLN6-208ENST00000567060 TGIF2-C20orf24A0A0A6YYL0 155 aa11.36□□□□□ -0.59
CLN6-208ENST00000567060 TMEM243Q9BU79 118 aa11.36□□□□□ -0.59
CLN6-208ENST00000567060 IGLV2-18A0A075B6J9 118 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 RTL8CO15255 209 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 NPYP01303 97 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 S100A1P23297 94 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 AMTP48728 403 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 LAGE3Q14657 143 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 SMIM2Q9BVW6 85 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 LRP1BQ9NZR2 4599 aa11.35□□□□□ -0.59
CLN6-208ENST00000567060 A0A087WX48 190 aa11.34□□□□□ -0.59
CLN6-208ENST00000567060 K7EMI3 77 aa11.34□□□□□ -0.59
CLN6-208ENST00000567060 SMAGPQ0VAQ4 97 aa11.34□□□□□ -0.59
CLN6-208ENST00000567060 MAP1LC3AQ9H492 121 aa11.34□□□□□ -0.59
CLN6-208ENST00000567060 A0A1B0GUV1 79 aa11.33□□□□□ -0.6
CLN6-208ENST00000567060 PRSS29PA6NIE9 313 aa11.33□□□□□ -0.6
CLN6-208ENST00000567060 UBE2L6O14933 153 aa11.33□□□□□ -0.6
CLN6-208ENST00000567060 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
CLN6-208ENST00000567060 TRAPPC1Q9Y5R8 145 aa11.33□□□□□ -0.6
CLN6-208ENST00000567060 TSHBP01222 138 aa11.32□□□□□ -0.6
CLN6-208ENST00000567060 FCER1GP30273 86 aa11.32□□□□□ -0.6
CLN6-208ENST00000567060 NFE4Q86UQ8 179 aa11.32□□□□□ -0.6
CLN6-208ENST00000567060 CBLN2Q8IUK8 224 aa11.32□□□□□ -0.6
CLN6-208ENST00000567060 NXT2Q9NPJ8 142 aaKnown RBP11.32□□□□□ -0.6
CLN6-208ENST00000567060 IBA57-AS1B1ANH7 110 aa11.31□□□□□ -0.6
CLN6-208ENST00000567060 TMEM262E9PQX1 116 aa11.31□□□□□ -0.6
CLN6-208ENST00000567060 ESDP10768 282 aa11.31□□□□□ -0.6
CLN6-208ENST00000567060 FABP9Q0Z7S8 132 aa11.31□□□□□ -0.6
CLN6-208ENST00000567060 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
CLN6-208ENST00000567060 HERC1Q15751 4861 aa11.3□□□□□ -0.6
CLN6-208ENST00000567060 ZNF25P17030 456 aaPredicted RBP11.3□□□□□ -0.6
CLN6-208ENST00000567060 C1orf134Q5TEV5 83 aa11.3□□□□□ -0.6
CLN6-208ENST00000567060 C6orf223Q8N319 242 aa11.3□□□□□ -0.6
CLN6-208ENST00000567060 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
CLN6-208ENST00000567060 M0R2N4 97 aa11.29□□□□□ -0.6
CLN6-208ENST00000567060 RAB5AP20339 215 aa11.29□□□□□ -0.6
CLN6-208ENST00000567060 Q8N8P6 123 aa11.29□□□□□ -0.6
CLN6-208ENST00000567060 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
CLN6-208ENST00000567060 IGHV3-30P01768 117 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 IGHV3-33P01772 117 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 IGHV3-30-3P0DP02 117 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 IGHV3-30-5P0DP03 117 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 G0S2P27469 103 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 Q0VG73 95 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 KIAA1644Q3SXP7 199 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 KRTAP1-5Q9BYS1 174 aa11.28□□□□□ -0.6
CLN6-208ENST00000567060 RBX1P62877 108 aa11.27□□□□□ -0.61
CLN6-208ENST00000567060 GAGE6Q13070 117 aa11.27□□□□□ -0.61
CLN6-208ENST00000567060 MRPL52Q86TS9 123 aaKnown RBP11.27□□□□□ -0.61
CLN6-208ENST00000567060 CSDC2Q9Y534 153 aaKnown RBP11.27□□□□□ -0.61
CLN6-208ENST00000567060 APOBP04114 4563 aaKnown RBP11.26□□□□□ -0.61
CLN6-208ENST00000567060 ORMDL2Q53FV1 153 aa11.26□□□□□ -0.61
CLN6-208ENST00000567060 AMMECR1LQ6DCA0 310 aa11.26□□□□□ -0.61
CLN6-208ENST00000567060 RMI2Q96E14 147 aa11.26□□□□□ -0.61
CLN6-208ENST00000567060 TIMM21Q9BVV7 248 aa11.26□□□□□ -0.61
CLN6-208ENST00000567060 COX11Q9Y6N1 276 aa11.26□□□□□ -0.61
CLN6-208ENST00000567060 LINC01549A6NIU2 74 aa11.25□□□□□ -0.61
CLN6-208ENST00000567060 ATP6V1G1O75348 118 aa11.25□□□□□ -0.61
CLN6-208ENST00000567060 C20orf203Q8NBC4 194 aa11.25□□□□□ -0.61
CLN6-208ENST00000567060 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
CLN6-208ENST00000567060 LOC389332A0A1B0GUA5 103 aa11.24□□□□□ -0.61
CLN6-208ENST00000567060 COLCA2A8K830 154 aa11.24□□□□□ -0.61
CLN6-208ENST00000567060 CRPP02741 224 aa11.24□□□□□ -0.61
CLN6-208ENST00000567060 ANGP03950 147 aaKnown RBP11.24□□□□□ -0.61
CLN6-208ENST00000567060 FGF6P10767 208 aa11.24□□□□□ -0.61
CLN6-208ENST00000567060 TM2D2Q9BX73 214 aa11.24□□□□□ -0.61
CLN6-208ENST00000567060 PRR34Q9NV39 138 aa11.24□□□□□ -0.61
CLN6-208ENST00000567060 KLK12Q9UKR0 248 aa11.24□□□□□ -0.61
CLN6-208ENST00000567060 DNAH5Q8TE73 4624 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms