RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
AC004449.1-201ENST00000564240 SMIM12Q96EX1 92 aa10.54□□□□□ -0.72
AC004449.1-201ENST00000564240 PLA2G2DQ9UNK4 145 aa10.54□□□□□ -0.72
AC004449.1-201ENST00000564240 PANO1I0J062 215 aa10.52□□□□□ -0.73
AC004449.1-201ENST00000564240 AMMECR1LQ6DCA0 310 aa10.52□□□□□ -0.73
AC004449.1-201ENST00000564240 CFAP161Q6P656 301 aa10.52□□□□□ -0.73
AC004449.1-201ENST00000564240 SMIM15Q7Z3B0 74 aa10.52□□□□□ -0.73
AC004449.1-201ENST00000564240 NUDT10Q8NFP7 164 aa10.52□□□□□ -0.73
AC004449.1-201ENST00000564240 NUDT11Q96G61 164 aa10.52□□□□□ -0.73
AC004449.1-201ENST00000564240 GFRA4Q9GZZ7 299 aa10.52□□□□□ -0.73
AC004449.1-201ENST00000564240 HNRNPA3P51991 378 aaKnown RBP10.51□□□□□ -0.73
AC004449.1-201ENST00000564240 CNBPP62633 177 aaKnown RBP10.51□□□□□ -0.73
AC004449.1-201ENST00000564240 C9orf62Q8N4C0 152 aa10.51□□□□□ -0.73
AC004449.1-201ENST00000564240 PGLYRP4Q96LB8 373 aa10.51□□□□□ -0.73
AC004449.1-201ENST00000564240 GAGE12HA6NDE8 117 aa10.5□□□□□ -0.73
AC004449.1-201ENST00000564240 BCL2P10415 239 aa10.49□□□□□ -0.73
AC004449.1-201ENST00000564240 RNASEKQ6P5S7 137 aaKnown RBP10.49□□□□□ -0.73
AC004449.1-201ENST00000564240 TRAV26-2A0A0B4J265 109 aa10.48□□□□□ -0.73
AC004449.1-201ENST00000564240 CHTF8P0CG12 524 aa10.48□□□□□ -0.73
AC004449.1-201ENST00000564240 RNASE7Q9H1E1 156 aaKnown RBP10.48□□□□□ -0.73
AC004449.1-201ENST00000564240 RPP21Q9H633 154 aaKnown RBP10.48□□□□□ -0.73
AC004449.1-201ENST00000564240 LRP1Q07954 4544 aaKnown RBP10.47□□□□□ -0.73
AC004449.1-201ENST00000564240 TRBV20OR9-2A0A075B6H5 130 aa10.47□□□□□ -0.73
AC004449.1-201ENST00000564240 A0A087WYN8 130 aa10.47□□□□□ -0.73
AC004449.1-201ENST00000564240 GATD1Q8NB37 220 aa10.47□□□□□ -0.73
AC004449.1-201ENST00000564240 RNF185Q96GF1 192 aa10.47□□□□□ -0.73
AC004449.1-201ENST00000564240 SLPIP03973 132 aa10.46□□□□□ -0.73
AC004449.1-201ENST00000564240 TAGLN2P37802 199 aaKnown RBP10.46□□□□□ -0.73
AC004449.1-201ENST00000564240 CTRLP40313 264 aa10.46□□□□□ -0.73
AC004449.1-201ENST00000564240 HIGD2BQ4VC39 106 aa10.46□□□□□ -0.73
AC004449.1-201ENST00000564240 OCC1Q8TAD7 63 aa10.46□□□□□ -0.73
AC004449.1-201ENST00000564240 C7orf33Q8WU49 177 aa10.46□□□□□ -0.73
AC004449.1-201ENST00000564240 APCSP02743 223 aa10.45□□□□□ -0.74
AC004449.1-201ENST00000564240 PMCHP20382 165 aa10.45□□□□□ -0.74
AC004449.1-201ENST00000564240 RPS10P46783 165 aaKnown RBP10.45□□□□□ -0.74
AC004449.1-201ENST00000564240 COX6A2Q02221 97 aa10.45□□□□□ -0.74
AC004449.1-201ENST00000564240 Q6ZRU5 148 aa10.45□□□□□ -0.74
AC004449.1-201ENST00000564240 SLC51BQ86UW2 128 aa10.45□□□□□ -0.74
AC004449.1-201ENST00000564240 RPL39LQ96EH5 51 aaKnown RBP10.45□□□□□ -0.74
AC004449.1-201ENST00000564240 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 IGKV2-24A0A0C4DH68 120 aa10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 IGKV2-29A2NJV5 120 aaPredicted RBP10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 GATCO43716 136 aaKnown RBP10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 CIRBPQ14011 172 aaKnown RBP10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 MAJINQ3KP22 176 aa10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 TEX261Q6UWH6 196 aa10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 CHCHD10Q8WYQ3 142 aaPredicted RBP10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 BTF3L4Q96K17 158 aa10.44□□□□□ -0.74
AC004449.1-201ENST00000564240 NCR2O95944 276 aa10.43□□□□□ -0.74
AC004449.1-201ENST00000564240 FOXA3P55318 350 aaPredicted RBP10.43□□□□□ -0.74
AC004449.1-201ENST00000564240 Q6ZNX1 250 aa10.43□□□□□ -0.74
AC004449.1-201ENST00000564240 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
AC004449.1-201ENST00000564240 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
AC004449.1-201ENST00000564240 FAT3Q8TDW7 4589 aa10.43□□□□□ -0.74
AC004449.1-201ENST00000564240 K7EN84 100 aa10.42□□□□□ -0.74
AC004449.1-201ENST00000564240 FGF6P10767 208 aa10.42□□□□□ -0.74
AC004449.1-201ENST00000564240 CEBPGP53567 150 aa10.42□□□□□ -0.74
AC004449.1-201ENST00000564240 C15orf56Q8N910 161 aa10.42□□□□□ -0.74
AC004449.1-201ENST00000564240 BORCS7Q96B45 105 aa10.42□□□□□ -0.74
AC004449.1-201ENST00000564240 CNFNQ9BYD5 112 aa10.42□□□□□ -0.74
AC004449.1-201ENST00000564240 SDHAF1A6NFY7 115 aa10.41□□□□□ -0.74
AC004449.1-201ENST00000564240 A8MWL6 223 aa10.41□□□□□ -0.74
AC004449.1-201ENST00000564240 H7C423 109 aa10.41□□□□□ -0.74
AC004449.1-201ENST00000564240 NDUFS6O75380 124 aaKnown RBP10.41□□□□□ -0.74
AC004449.1-201ENST00000564240 PRSS3P2Q8NHM4 247 aa10.41□□□□□ -0.74
AC004449.1-201ENST00000564240 LYPD6BQ8NI32 183 aa10.41□□□□□ -0.74
AC004449.1-201ENST00000564240 PKHD1L1Q86WI1 4243 aa10.41□□□□□ -0.74
AC004449.1-201ENST00000564240 I3L3M4 83 aa10.4□□□□□ -0.74
AC004449.1-201ENST00000564240 PHOX2AO14813 284 aa10.4□□□□□ -0.74
AC004449.1-201ENST00000564240 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
AC004449.1-201ENST00000564240 XCL1P47992 114 aa10.39□□□□□ -0.75
AC004449.1-201ENST00000564240 TCTE3Q8IZS6 198 aa10.39□□□□□ -0.75
AC004449.1-201ENST00000564240 STPG4Q8N801 248 aa10.39□□□□□ -0.75
AC004449.1-201ENST00000564240 BLOC1S1P78537 153 aa10.38□□□□□ -0.75
AC004449.1-201ENST00000564240 OR5A1Q8NGJ0 315 aa10.38□□□□□ -0.75
AC004449.1-201ENST00000564240 ST20Q9HBF5 79 aa10.38□□□□□ -0.75
AC004449.1-201ENST00000564240 ZNF25P17030 456 aaPredicted RBP10.37□□□□□ -0.75
AC004449.1-201ENST00000564240 SS18Q15532 418 aa10.37□□□□□ -0.75
AC004449.1-201ENST00000564240 GVQW2A0A096LPI5 108 aaPredicted RBP10.36□□□□□ -0.75
AC004449.1-201ENST00000564240 CCL25O15444 150 aa10.36□□□□□ -0.75
AC004449.1-201ENST00000564240 FOXI1Q12951 378 aa10.36□□□□□ -0.75
AC004449.1-201ENST00000564240 PKIGQ9Y2B9 76 aa10.36□□□□□ -0.75
AC004449.1-201ENST00000564240 HMCN2Q8NDA2 5059 aa10.36□□□□□ -0.75
AC004449.1-201ENST00000564240 IGHV1-58A0A0C4DH39 117 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 LINC00959A0A1B0GUT2 108 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 TMEM250H0YL14 139 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 FAM231DQ6ZW35 169 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 LINC00526Q96FQ7 95 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 TMEM242Q9NWH2 141 aa10.35□□□□□ -0.75
AC004449.1-201ENST00000564240 FAM231BA6NCW3 169 aa10.34□□□□□ -0.75
AC004449.1-201ENST00000564240 ALKAL2Q6UX46 152 aa10.34□□□□□ -0.75
AC004449.1-201ENST00000564240 EIF5A2Q9GZV4 153 aaKnown RBP10.34□□□□□ -0.75
AC004449.1-201ENST00000564240 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
AC004449.1-201ENST00000564240 A0A096LNI7 61 aa10.33□□□□□ -0.76
AC004449.1-201ENST00000564240 TRBV6-5A0A0K0K1A5 114 aa10.33□□□□□ -0.76
AC004449.1-201ENST00000564240 A0A1B0GUT8 65 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms