RNA–Protein interactions for RNA: ENST00000563705.5

SPSB3-203, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 876 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-203ENST00000563705 GATD1Q8NB37 220 aa13.8□□□□□ -0.2
SPSB3-203ENST00000563705 C20orf203Q8NBC4 194 aa13.8□□□□□ -0.2
SPSB3-203ENST00000563705 HERC1Q15751 4861 aa13.8□□□□□ -0.2
SPSB3-203ENST00000563705 FLG2Q5D862 2391 aaPredicted RBP13.79□□□□□ -0.2
SPSB3-203ENST00000563705 AMTP48728 403 aa13.79□□□□□ -0.2
SPSB3-203ENST00000563705 CEBPGP53567 150 aa13.79□□□□□ -0.2
SPSB3-203ENST00000563705 SCXQ7RTU7 201 aa13.79□□□□□ -0.2
SPSB3-203ENST00000563705 TRAV8-4A0A0B4J246 113 aa13.78□□□□□ -0.2
SPSB3-203ENST00000563705 UBE2L6O14933 153 aa13.78□□□□□ -0.2
SPSB3-203ENST00000563705 PLA2G1BP04054 148 aaKnown RBP13.78□□□□□ -0.2
SPSB3-203ENST00000563705 TEX261Q6UWH6 196 aa13.78□□□□□ -0.2
SPSB3-203ENST00000563705 LINC00528Q8N1L1 170 aa13.78□□□□□ -0.2
SPSB3-203ENST00000563705 FAM210AQ96ND0 272 aa13.78□□□□□ -0.2
SPSB3-203ENST00000563705 SMIM7Q9BQ49 75 aa13.78□□□□□ -0.2
SPSB3-203ENST00000563705 CHAC1Q9BUX1 264 aa13.78□□□□□ -0.2
SPSB3-203ENST00000563705 EIF5A2Q9GZV4 153 aaKnown RBP13.78□□□□□ -0.2
SPSB3-203ENST00000563705 TRAV26-2A0A0B4J265 109 aa13.77□□□□□ -0.21
SPSB3-203ENST00000563705 FOXA3P55318 350 aaPredicted RBP13.77□□□□□ -0.21
SPSB3-203ENST00000563705 IGLV4-60A0A075B6I1 120 aa13.76□□□□□ -0.21
SPSB3-203ENST00000563705 PRSS1P07477 247 aa13.76□□□□□ -0.21
SPSB3-203ENST00000563705 DGAT2L7PQ6IED9 249 aa13.76□□□□□ -0.21
SPSB3-203ENST00000563705 LINC01551Q86U37 167 aa13.76□□□□□ -0.21
SPSB3-203ENST00000563705 NCR2O95944 276 aa13.75□□□□□ -0.21
SPSB3-203ENST00000563705 BORCS7Q96B45 105 aa13.75□□□□□ -0.21
SPSB3-203ENST00000563705 IGLV10-54A0A075B6I4 117 aa13.74□□□□□ -0.21
SPSB3-203ENST00000563705 CLRN3Q8NCR9 226 aa13.74□□□□□ -0.21
SPSB3-203ENST00000563705 DEFB104AQ8WTQ1 72 aa13.74□□□□□ -0.21
SPSB3-203ENST00000563705 RPL39LQ96EH5 51 aaKnown RBP13.74□□□□□ -0.21
SPSB3-203ENST00000563705 GFRA4Q9GZZ7 299 aa13.74□□□□□ -0.21
SPSB3-203ENST00000563705 ZNF727A8MUV8 499 aa13.73□□□□□ -0.21
SPSB3-203ENST00000563705 SRP19P09132 144 aaKnown RBP13.73□□□□□ -0.21
SPSB3-203ENST00000563705 TSKUQ8WUA8 353 aa13.73□□□□□ -0.21
SPSB3-203ENST00000563705 FAM231BA6NCW3 169 aa13.72□□□□□ -0.21
SPSB3-203ENST00000563705 CIRBP-AS1Q8TBR5 109 aa13.72□□□□□ -0.21
SPSB3-203ENST00000563705 OSTCQ9NRP0 149 aa13.72□□□□□ -0.21
SPSB3-203ENST00000563705 A0A1B0GVG6 124 aa13.71□□□□□ -0.21
SPSB3-203ENST00000563705 SDHAF1A6NFY7 115 aa13.71□□□□□ -0.21
SPSB3-203ENST00000563705 C9orf163Q8N9P6 203 aa13.71□□□□□ -0.21
SPSB3-203ENST00000563705 TRBV6-5A0A0K0K1A5 114 aa13.7□□□□□ -0.22
SPSB3-203ENST00000563705 A0A1B0GUT8 65 aa13.7□□□□□ -0.22
SPSB3-203ENST00000563705 HIGD1CA8MV81 97 aa13.7□□□□□ -0.22
SPSB3-203ENST00000563705 H7C423 109 aa13.7□□□□□ -0.22
SPSB3-203ENST00000563705 APCSP02743 223 aa13.7□□□□□ -0.22
SPSB3-203ENST00000563705 TMEM191AQ9H0A3 160 aa13.69□□□□□ -0.22
SPSB3-203ENST00000563705 CNBPP62633 177 aaKnown RBP13.68□□□□□ -0.22
SPSB3-203ENST00000563705 AMMECR1LQ6DCA0 310 aa13.68□□□□□ -0.22
SPSB3-203ENST00000563705 I3L3M4 83 aa13.67□□□□□ -0.22
SPSB3-203ENST00000563705 FAM74A3Q4VXF1 159 aa13.67□□□□□ -0.22
SPSB3-203ENST00000563705 hDV102S1A0JD36 115 aa13.66□□□□□ -0.22
SPSB3-203ENST00000563705 V9GYV3 84 aa13.66□□□□□ -0.22
SPSB3-203ENST00000563705 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.65□□□□□ -0.22
SPSB3-203ENST00000563705 IGKV2-29A2NJV5 120 aaPredicted RBP13.65□□□□□ -0.22
SPSB3-203ENST00000563705 ZNF25P17030 456 aaPredicted RBP13.65□□□□□ -0.22
SPSB3-203ENST00000563705 PMCHP20382 165 aa13.65□□□□□ -0.22
SPSB3-203ENST00000563705 ISOC2Q96AB3 205 aa13.65□□□□□ -0.22
SPSB3-203ENST00000563705 MRAP2Q96G30 205 aa13.65□□□□□ -0.22
SPSB3-203ENST00000563705 FGF6P10767 208 aa13.64□□□□□ -0.23
SPSB3-203ENST00000563705 TMEM241Q24JQ0 296 aa13.64□□□□□ -0.23
SPSB3-203ENST00000563705 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
SPSB3-203ENST00000563705 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
SPSB3-203ENST00000563705 ST20Q9HBF5 79 aa13.64□□□□□ -0.23
SPSB3-203ENST00000563705 AP5S1Q9NUS5 200 aa13.64□□□□□ -0.23
SPSB3-203ENST00000563705 KRTAP10-4P60372 401 aaPredicted RBP13.63□□□□□ -0.23
SPSB3-203ENST00000563705 RIGQ13278 110 aa13.63□□□□□ -0.23
SPSB3-203ENST00000563705 SDIM1Q6ZPB5 146 aa13.63□□□□□ -0.23
SPSB3-203ENST00000563705 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.62□□□□□ -0.23
SPSB3-203ENST00000563705 IGKV3OR2-268A0A0C4DH90 116 aa13.62□□□□□ -0.23
SPSB3-203ENST00000563705 GAGE12HA6NDE8 117 aa13.62□□□□□ -0.23
SPSB3-203ENST00000563705 GAS8-AS1O95177 125 aa13.62□□□□□ -0.23
SPSB3-203ENST00000563705 RAB4AP20338 218 aa13.62□□□□□ -0.23
SPSB3-203ENST00000563705 RPL23P62829 140 aaKnown RBP13.62□□□□□ -0.23
SPSB3-203ENST00000563705 NUP35Q8NFH5 326 aa13.62□□□□□ -0.23
SPSB3-203ENST00000563705 TSHBP01222 138 aa13.61□□□□□ -0.23
SPSB3-203ENST00000563705 ESDP10768 282 aa13.61□□□□□ -0.23
SPSB3-203ENST00000563705 CFAP161Q6P656 301 aa13.61□□□□□ -0.23
SPSB3-203ENST00000563705 AMN1Q8IY45 258 aa13.61□□□□□ -0.23
SPSB3-203ENST00000563705 NAT8Q9UHE5 227 aa13.61□□□□□ -0.23
SPSB3-203ENST00000563705 NAT8BQ9UHF3 227 aa13.61□□□□□ -0.23
SPSB3-203ENST00000563705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.61□□□□□ -0.23
SPSB3-203ENST00000563705 TRBV27A0A0K0K1C4 114 aa13.6□□□□□ -0.23
SPSB3-203ENST00000563705 POLR2KP53803 58 aaKnown RBP13.6□□□□□ -0.23
SPSB3-203ENST00000563705 ADIRFQ15847 76 aa13.6□□□□□ -0.23
SPSB3-203ENST00000563705 C15orf56Q8N910 161 aa13.6□□□□□ -0.23
SPSB3-203ENST00000563705 CHCHD10Q8WYQ3 142 aaPredicted RBP13.6□□□□□ -0.23
SPSB3-203ENST00000563705 BTF3L4Q96K17 158 aa13.6□□□□□ -0.23
SPSB3-203ENST00000563705 SMDT1Q9H4I9 107 aa13.6□□□□□ -0.23
SPSB3-203ENST00000563705 TMEM242Q9NWH2 141 aa13.6□□□□□ -0.23
SPSB3-203ENST00000563705 IGHV3-64A0A075B6Q5 118 aa13.59□□□□□ -0.23
SPSB3-203ENST00000563705 C9JQL5 133 aa13.59□□□□□ -0.23
SPSB3-203ENST00000563705 RPS10P46783 165 aaKnown RBP13.59□□□□□ -0.23
SPSB3-203ENST00000563705 CIRBPQ14011 172 aaKnown RBP13.59□□□□□ -0.23
SPSB3-203ENST00000563705 PEA15Q15121 130 aa13.59□□□□□ -0.23
SPSB3-203ENST00000563705 OR5A1Q8NGJ0 315 aa13.59□□□□□ -0.23
SPSB3-203ENST00000563705 TMEM101Q96IK0 257 aa13.59□□□□□ -0.23
SPSB3-203ENST00000563705 KRTAP29-1A8MX34 341 aaPredicted RBP13.58□□□□□ -0.24
SPSB3-203ENST00000563705 PPP1R17O96001 155 aa13.58□□□□□ -0.24
SPSB3-203ENST00000563705 SLPIP03973 132 aa13.58□□□□□ -0.24
SPSB3-203ENST00000563705 PANO1I0J062 215 aa13.57□□□□□ -0.24
SPSB3-203ENST00000563705 J3QL48 77 aa13.57□□□□□ -0.24
SPSB3-203ENST00000563705 MRPL52Q86TS9 123 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms