RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 HSBP1O75506 76 aa7.12□□□□□ -1.27
SMG1-208ENST00000563448 RPL36AP83881 106 aaKnown RBP7.12□□□□□ -1.27
SMG1-208ENST00000563448 PHLDA1Q8WV24 401 aaPredicted RBP7.12□□□□□ -1.27
SMG1-208ENST00000563448 RPL36ALQ969Q0 106 aaKnown RBP7.12□□□□□ -1.27
SMG1-208ENST00000563448 VSIG2Q96IQ7 327 aa7.12□□□□□ -1.27
SMG1-208ENST00000563448 CBY1Q9Y3M2 126 aa7.12□□□□□ -1.27
SMG1-208ENST00000563448 COL7A1Q02388 2944 aa7.12□□□□□ -1.27
SMG1-208ENST00000563448 IGHV1-24A0A0C4DH33 117 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 IGHV3-38A0A0C4DH36 116 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 I3L3M4 83 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 LINC00694P0DN24 101 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 UBE2D3P61077 147 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 UBE2D2P62837 147 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
SMG1-208ENST00000563448 A0A096LNJ9 63 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 A0A0J9YY99 117 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 M0R143 59 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 PAX4O43316 350 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 TSHBP01222 138 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 GYPEP15421 78 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 LAGE3Q14657 143 aa7.11□□□□□ -1.27
SMG1-208ENST00000563448 TRAV26-1A0A087WT03 109 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 AMTP48728 403 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 CDPF1Q6NVV7 123 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 ZNF664Q8N3J9 261 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 KIR2DL4Q99706 377 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 PRO1933Q9H354 126 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 K7EMI3 77 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 ANKRD39Q53RE8 183 aa7.1□□□□□ -1.27
SMG1-208ENST00000563448 FCER1GP30273 86 aa7.09□□□□□ -1.27
SMG1-208ENST00000563448 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.27
SMG1-208ENST00000563448 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
SMG1-208ENST00000563448 DEFB131BA0A096LNP1 70 aa7.08□□□□□ -1.28
SMG1-208ENST00000563448 DAZ4Q86SG3 579 aaKnown RBP7.08□□□□□ -1.28
SMG1-208ENST00000563448 DAZ3Q9NR90 486 aaKnown RBP7.08□□□□□ -1.28
SMG1-208ENST00000563448 NUDT3O95989 172 aa7.08□□□□□ -1.28
SMG1-208ENST00000563448 HBDP02042 147 aa7.08□□□□□ -1.28
SMG1-208ENST00000563448 NTM-AS1Q6ZSK4 140 aa7.08□□□□□ -1.28
SMG1-208ENST00000563448 A0A096LPF7 62 aa7.07□□□□□ -1.28
SMG1-208ENST00000563448 TRAV10A0A0B4J240 114 aa7.07□□□□□ -1.28
SMG1-208ENST00000563448 COTL1Q14019 142 aa7.07□□□□□ -1.28
SMG1-208ENST00000563448 LINC00173Q6ZV60 143 aa7.07□□□□□ -1.28
SMG1-208ENST00000563448 CHCHD7Q9BUK0 85 aa7.07□□□□□ -1.28
SMG1-208ENST00000563448 H3BNG1 76 aa7.06□□□□□ -1.28
SMG1-208ENST00000563448 ATP6V0E2Q8NHE4 81 aa7.06□□□□□ -1.28
SMG1-208ENST00000563448 LEPROTL1O95214 131 aa7.06□□□□□ -1.28
SMG1-208ENST00000563448 C2orf66Q6UXQ4 117 aa7.06□□□□□ -1.28
SMG1-208ENST00000563448 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
SMG1-208ENST00000563448 GTSF1LQ9H1H1 148 aa7.06□□□□□ -1.28
SMG1-208ENST00000563448 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
SMG1-208ENST00000563448 RPL39P62891 51 aaKnown RBP7.05□□□□□ -1.28
SMG1-208ENST00000563448 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
SMG1-208ENST00000563448 C20orf203Q8NBC4 194 aa7.05□□□□□ -1.28
SMG1-208ENST00000563448 CYSLTR1Q9Y271 337 aa7.05□□□□□ -1.28
SMG1-208ENST00000563448 SNHG12Q9BXW3 62 aa7.04□□□□□ -1.28
SMG1-208ENST00000563448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.03□□□□□ -1.28
SMG1-208ENST00000563448 TRBV6-8A0A0A6YYG3 113 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 IGKV2-29A2NJV5 120 aaPredicted RBP7.03□□□□□ -1.28
SMG1-208ENST00000563448 DLEU1O43261 78 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 G0S2P27469 103 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 HSPB8Q9UJY1 196 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 SCGB1D1O95968 90 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 C3orf79P0CE67 100 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 TMEM97Q5BJF2 176 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 SH2D6Q7Z4S9 175 aa7.03□□□□□ -1.28
SMG1-208ENST00000563448 TRBV25-1A0A075B6N4 114 aa7.02□□□□□ -1.29
SMG1-208ENST00000563448 IGIPA6NJ69 53 aa7.02□□□□□ -1.29
SMG1-208ENST00000563448 ZNF25P17030 456 aaPredicted RBP7.02□□□□□ -1.29
SMG1-208ENST00000563448 IFI27L1Q96BM0 104 aa7.02□□□□□ -1.29
SMG1-208ENST00000563448 SCGB3A1Q96QR1 104 aa7.02□□□□□ -1.29
SMG1-208ENST00000563448 MIEN1Q9BRT3 115 aa7.02□□□□□ -1.29
SMG1-208ENST00000563448 LINC01549A6NIU2 74 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 EREGO14944 169 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 KRTDAPP60985 99 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 LYPD5Q6UWN5 251 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 ERASQ7Z444 233 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 STAB2Q8WWQ8 2551 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 ATP5LO75964 103 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 PCP4P48539 62 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 CEMP1Q6PRD7 247 aaPredicted RBP7.01□□□□□ -1.29
SMG1-208ENST00000563448 SPATA12Q7Z6I5 190 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 FAM104AQ969W3 186 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 TIMM17AQ99595 171 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 OPRPNQ99935 248 aaPredicted RBP7.01□□□□□ -1.29
SMG1-208ENST00000563448 MAP1LC3CQ9BXW4 147 aa7.01□□□□□ -1.29
SMG1-208ENST00000563448 DNAH7Q8WXX0 4024 aa7□□□□□ -1.29
SMG1-208ENST00000563448 IGLL5B9A064 214 aa7□□□□□ -1.29
SMG1-208ENST00000563448 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7□□□□□ -1.29
SMG1-208ENST00000563448 C15orf53Q8NAA6 179 aa7□□□□□ -1.29
SMG1-208ENST00000563448 PYGO1Q9Y3Y4 419 aa7□□□□□ -1.29
SMG1-208ENST00000563448 SYS1-DBNDD2H3BUS1 97 aa7□□□□□ -1.29
SMG1-208ENST00000563448 H7C423 109 aa7□□□□□ -1.29
SMG1-208ENST00000563448 GAGE6Q13070 117 aa7□□□□□ -1.29
SMG1-208ENST00000563448 COL5A1-AS1Q5SY13 56 aa7□□□□□ -1.29
SMG1-208ENST00000563448 TEX43Q6ZNM6 134 aa7□□□□□ -1.29
SMG1-208ENST00000563448 Q8N976 141 aa7□□□□□ -1.29
SMG1-208ENST00000563448 BAALCQ8WXS3 180 aa7□□□□□ -1.29
SMG1-208ENST00000563448 TMEM141Q96I45 108 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms