RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 HMGB3O15347 200 aaKnown RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 ZNF324O75467 553 aaPredicted RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 CXorf1O96002 111 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 SEC11BP0C7V7 166 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 SPART-AS1P0CW21 52 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 GCHFRP30047 84 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 CEBPGP53567 150 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 TCTAP57738 103 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 RANP62826 216 aaKnown RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 TMEM78Q5T7P6 136 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 PRR9Q5T870 116 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 FAM222AQ5U5X8 452 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 ZFAND2AQ8N6M9 145 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 Q8N976 141 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 TMEM263Q8WUH6 116 aaKnown RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 LINC00467Q9BRT7 94 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 TMEM208Q9BTX3 173 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 TMEM167BQ9NRX6 74 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 KLK5Q9Y337 293 aaPredicted RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 YTHDF2Q9Y5A9 579 aaKnown RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 LENEPQ9Y5L5 61 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
LINC00254-201ENST00000563416 DYNC1H1Q14204 4646 aaKnown RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 EPPK1P58107 5090 aaKnown RBP2.98□□□□□ -1.93
LINC00254-201ENST00000563416 TRAV10A0A0B4J240 114 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 TRAV12-3A0A0B4J271 114 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 A0A1B0GXF2 115 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 KANTRA0A1W2PQU2 76 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 A0A1W2PRE2 83 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 PGPA6NDG6 321 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 GGTLC3B5MD39 225 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 UMAD1C9J7I0 102 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 C1QBP02746 253 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 PRM2P04554 102 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 CSN1S1P47710 185 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 BTN1A1Q13410 526 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 FAM74A1Q5RGS3 127 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 AKR1C8PQ5T2L2 129 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 FAM162BQ5T6X4 162 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 Q6AWC8 147 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
LINC00254-201ENST00000563416 C5orf17Q8NAS9 161 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 Q8TAT8 98 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 ORAOV1Q8WV07 137 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 SMIM12Q96EX1 92 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 LINC01587Q99440 93 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 APLNQ9ULZ1 77 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 ARL2-SNX15V9GYD0 113 aa2.97□□□□□ -1.93
LINC00254-201ENST00000563416 DEFB131BA0A096LNP1 70 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 MAP1LC3B2A6NCE7 125 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 M0R036 132 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 APCSP02743 223 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TCRAP04437 139 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 GPX1P07203 203 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TPT1P13693 172 aaKnown RBP2.96□□□□□ -1.94
LINC00254-201ENST00000563416 EMP1P54849 157 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TCL1AP56279 114 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 GNG5P63218 68 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 EIF5AP63241 154 aaKnown RBP2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TDRG1Q3Y452 100 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 LGALSLQ3ZCW2 172 aaPredicted RBP2.96□□□□□ -1.94
LINC00254-201ENST00000563416 SAPCD1Q5SSQ6 148 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 IBA57Q5T440 356 aaKnown RBP2.96□□□□□ -1.94
LINC00254-201ENST00000563416 LGALS9CQ6DKI2 356 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 DPPA3Q6W0C5 159 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 FAM231DQ6ZW35 169 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 ZNF767PQ75MW2 155 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 EIF4E3Q8N5X7 224 aaKnown RBP2.96□□□□□ -1.94
LINC00254-201ENST00000563416 LINC00337Q8N6G1 96 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 CYB561D1Q8N8Q1 229 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TMEM75Q8N9X5 138 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 ZNF680Q8NEM1 530 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 CMTM2Q8TAZ6 248 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 MBD3L1Q8WWY6 194 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TVP23CQ96ET8 276 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 HYLS1Q96M11 299 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 C18orf15Q96N68 181 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 ZNF471Q9BX82 626 aaPredicted RBP2.96□□□□□ -1.94
LINC00254-201ENST00000563416 MAP1LC3BQ9GZQ8 125 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 EPDR1Q9UM22 224 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TIMM8BQ9Y5J9 83 aaPredicted RBP2.96□□□□□ -1.94
LINC00254-201ENST00000563416 HECTD4Q9Y4D8 3996 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 PKHD1P08F94 4074 aa2.96□□□□□ -1.94
LINC00254-201ENST00000563416 TRAV8-1A0A0A6YYK1 113 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 LOC389332A0A1B0GUA5 103 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 TMEM223A0PJW6 202 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 IGLL5B9A064 214 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 F5H768 121 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 PFDN1O60925 122 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 IGLV2-8P01709 118 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 TLX1NBP0CAT3 122 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 RNASE4P34096 147 aaKnown RBP2.95□□□□□ -1.94
LINC00254-201ENST00000563416 DAD1P61803 113 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 FLI1Q01543 452 aaPredicted RBP2.95□□□□□ -1.94
LINC00254-201ENST00000563416 Q6ZQT7 251 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 GOLT1AQ6ZVE7 132 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 AKAP14Q86UN6 197 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 SLC51BQ86UW2 128 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 C9orf62Q8N4C0 152 aa2.95□□□□□ -1.94
LINC00254-201ENST00000563416 SLC25A29Q8N8R3 303 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms