RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 SPANXA1Q9NS26 97 aa15.39■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 GIG44P09565 113 aaPredicted RBP15.39■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 COTL1Q14019 142 aa15.39■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 OPRPNQ99935 248 aaPredicted RBP15.39■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 TRAV4A0A0B4J268 109 aa15.38■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 RPL35AP18077 110 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 KRTAP10-3P60369 221 aa15.38■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 DAZ2Q13117 558 aaKnown RBP15.38■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 LINC00482Q8N8I6 264 aa15.37■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 AMELXQ99217 191 aa15.36■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 CHCHD7Q9BUK0 85 aa15.36■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 NACAE9PAV3 2078 aa15.36■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 TRBV7-3A0A075B6L6 115 aa15.36■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 TRBV10-1A0A0K0K1A3 114 aa15.36■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 SCGB1D4Q6XE38 83 aa15.36■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 WFDC10AQ9H1F0 79 aa15.36■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 INAFM1C9JVW0 142 aa15.35■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 Q6ZTI0 123 aa15.35■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 RAB37Q96AX2 223 aa15.35■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 Q9UF83 564 aa15.35■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 HIVEP2P31629 2446 aa15.35■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 H3BUT2 72 aa15.34■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 CIDEAO60543 219 aa15.34■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 GTF2H5Q6ZYL4 71 aa15.34■□□□□ 0.05
VPS9D1-AS1-202ENST00000562866 TMEM223A0PJW6 202 aa15.33■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 K7EQD1 137 aa15.33■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 ZNF479Q96JC4 524 aa15.33■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 NHP2Q9NX24 153 aaKnown RBP15.33■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 UBE2D4Q9Y2X8 147 aa15.33■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 K7EP13 123 aa15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 LEPROTO15243 131 aa15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 FOSL1P15407 271 aa15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 LGALS3P17931 250 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 RPL36AP83881 106 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 RRN3P1Q2M238 152 aa15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 CSNK1G2-AS1Q8NCQ2 148 aa15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 PHLDA1Q8WV24 401 aaPredicted RBP15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 RPL36ALQ969Q0 106 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 NOP10Q9NPE3 64 aaKnown RBP15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 WNK1Q9H4A3 2382 aa15.32■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 A0A0J9YXV3 536 aa15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 J3QQQ9 107 aa15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 ZNF22P17026 224 aaPredicted RBP15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 INSL3P51460 131 aa15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 NF1P21359 2839 aa15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 IGHV3-38A0A0C4DH36 116 aa15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 GAGE10A6NGK3 116 aa15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 OVOL2Q9BRP0 275 aa15.31■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 BAHCC1Q9P281 2608 aa15.3■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 MRPS36P82909 103 aaKnown RBP15.3■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 PLEKHB2Q96CS7 222 aa15.3■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 TIMM21Q9BVV7 248 aa15.3■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 MTORP42345 2549 aa15.3■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 A0A1W2PPM0 123 aa15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 IGKV2-29A2NJV5 120 aaPredicted RBP15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 DAZ4Q86SG3 579 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 FAM104AQ969W3 186 aa15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 DAZ3Q9NR90 486 aaKnown RBP15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 TMEM238LA0A1B0GVL6 79 aa15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 PLAC8L1A1L4L8 177 aa15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 A6NJY4 79 aa15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 SAMD5Q5TGI4 173 aa15.29■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 FABP2P12104 132 aa15.28■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 SRSF9Q13242 221 aaKnown RBP eCLIP15.28■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 C12orf74Q32Q52 190 aa15.28■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 CEMP1Q6PRD7 247 aaPredicted RBP15.28■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 A0A0J9YY99 117 aa15.27■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 K7EP34 96 aa15.27■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 K7ERJ3 54 aa15.27■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 TSPEAR-AS2P59090 65 aa15.27■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 C9orf66Q5T8R8 295 aa15.27■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 SPANXB1Q9NS25 103 aaPredicted RBP15.27■□□□□ 0.04
VPS9D1-AS1-202ENST00000562866 TRGV2A0A075B6R0 118 aa15.26■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 TINCRA0A1B0GVN0 87 aa15.26■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 A0A1B0GWB2 263 aa15.26■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 SMAGPQ0VAQ4 97 aa15.26■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 SLC25A29Q8N8R3 303 aa15.26■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 OR5A1Q8NGJ0 315 aa15.26■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE12BA1L429 117 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE7O76087 117 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE12FP0CL80 117 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE12GP0CL81 117 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE12IP0CL82 117 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 UBE2D3P61077 147 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 UBE2D2P62837 147 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 DGAT2L7PQ6IED9 249 aa15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 NAA38Q9BRA0 125 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 CUBNO60494 3623 aa15.24■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 CRLF1O75462 422 aa15.24■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 Q6ZUT4 128 aa15.24■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 SPCS1Q9Y6A9 102 aa15.24■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 TRBV6-4A0A1B0GX49 114 aa15.23■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE12JA6NER3 117 aa15.21■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 IGLL5B9A064 214 aa15.21■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE4Q13068 117 aa15.21■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE5Q13069 117 aa15.21■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 GAGE13Q4V321 117 aa15.21■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 RNASE13Q5GAN3 156 aaKnown RBP15.21■□□□□ 0.03
VPS9D1-AS1-202ENST00000562866 FLNBO75369 2602 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms