RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 IGLC6P0CF74 106 aa3.63□□□□□ -1.83
CHD9-205ENST00000562785 CRIP1P50238 77 aa3.63□□□□□ -1.83
CHD9-205ENST00000562785 ZNF80P51504 273 aaPredicted RBP3.63□□□□□ -1.83
CHD9-205ENST00000562785 PRR9Q5T870 116 aa3.63□□□□□ -1.83
CHD9-205ENST00000562785 SPANXN1Q5VSR9 72 aa3.63□□□□□ -1.83
CHD9-205ENST00000562785 MRPL54Q6P161 138 aaKnown RBP3.63□□□□□ -1.83
CHD9-205ENST00000562785 TMEM208Q9BTX3 173 aa3.63□□□□□ -1.83
CHD9-205ENST00000562785 PHLDA3Q9Y5J5 127 aa3.63□□□□□ -1.83
CHD9-205ENST00000562785 TRAPPC1Q9Y5R8 145 aa3.63□□□□□ -1.83
CHD9-205ENST00000562785 TRAV12-2A0A075B6T6 113 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 H3BVH4 76 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 APCSP02743 223 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 CD7P09564 240 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 ARMS2P0C7Q2 107 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 SMIM17P0DL12 118 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 DEFB1P60022 68 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 LYZL1Q6UWQ5 148 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 ZNF493Q6ZR52 646 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 GATD1Q8NB37 220 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 LAMTOR2Q9Y2Q5 125 aa3.62□□□□□ -1.83
CHD9-205ENST00000562785 SETXQ7Z333 2677 aaKnown RBP3.61□□□□□ -1.83
CHD9-205ENST00000562785 LOC102724200A0A096LPH7 203 aaPredicted RBP3.61□□□□□ -1.83
CHD9-205ENST00000562785 GRIFINA4D1Z8 144 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 CRXO43186 299 aaPredicted RBP3.61□□□□□ -1.83
CHD9-205ENST00000562785 SPINK4O60575 86 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 ZNF324O75467 553 aaPredicted RBP3.61□□□□□ -1.83
CHD9-205ENST00000562785 PPP1R17O96001 155 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 PPBPP02775 128 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 TRGC2P03986 189 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 GZMBP10144 247 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 PRB4P10163 310 aaPredicted RBP3.61□□□□□ -1.83
CHD9-205ENST00000562785 FABP9Q0Z7S8 132 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 TMEM136Q6ZRR5 245 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 TMEM263Q8WUH6 116 aaKnown RBP3.61□□□□□ -1.83
CHD9-205ENST00000562785 TMEM191AQ9H0A3 160 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 ZFHX3Q15911 3703 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 C2CD3Q4AC94 2353 aa3.61□□□□□ -1.83
CHD9-205ENST00000562785 SMIM9A6NGZ8 99 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 M0R381 172 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BKO60814 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BJP06899 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 AZU1P20160 251 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BOP23527 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BBP33778 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BDP58876 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BCP62807 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST2H2BEQ16778 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 OR10J3Q5JRS4 329 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.6□□□□□ -1.83
CHD9-205ENST00000562785 RNASEKQ6P5S7 137 aaKnown RBP3.6□□□□□ -1.83
CHD9-205ENST00000562785 CAMK2N1Q7Z7J9 78 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 ORMDL3Q8N138 153 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 OR10AG1Q8NH19 301 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BHQ93079 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 PTH2Q96A98 100 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 MRAP2Q96G30 205 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 LINC01587Q99440 93 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BNQ99877 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 HIST1H2BMQ99879 126 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 DPH3P1Q9H4G8 78 aa3.6□□□□□ -1.83
CHD9-205ENST00000562785 CSDC2Q9Y534 153 aaKnown RBP3.6□□□□□ -1.83
CHD9-205ENST00000562785 TIMM8BQ9Y5J9 83 aaPredicted RBP3.6□□□□□ -1.83
CHD9-205ENST00000562785 CUBNO60494 3623 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 ANK3Q12955 4377 aaKnown RBP3.59□□□□□ -1.83
CHD9-205ENST00000562785 A8MWV9 139 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 H7C1H1 209 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 M0R2P5 195 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 RNASE3P12724 160 aaKnown RBP3.59□□□□□ -1.83
CHD9-205ENST00000562785 NTF3P20783 257 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 S100A2P29034 98 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 SRIP30626 198 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 FXYD7P58549 80 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 SLAQ13239 276 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 RRN3P1Q2M238 152 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 FAM104BQ5XKR9 115 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 ZNF705AQ6ZN79 300 aaPredicted RBP3.59□□□□□ -1.83
CHD9-205ENST00000562785 DEFB125Q8N687 156 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 RNF185Q96GF1 192 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 WFDC10AQ9H1F0 79 aa3.59□□□□□ -1.83
CHD9-205ENST00000562785 MGPP08493 103 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 HTN1P15515 57 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 PMCHP20382 165 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 CKS2P33552 79 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 KRTAP12-2P59991 146 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 REG3AQ06141 175 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 Q0VG73 95 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 RBMY1FQ15415 496 aaKnown RBP3.58□□□□□ -1.84
CHD9-205ENST00000562785 ZNF56Q15929 161 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 LGALS9BQ3B8N2 356 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 COA6Q5JTJ3 125 aaKnown RBP3.58□□□□□ -1.84
CHD9-205ENST00000562785 BAGE3Q86Y29 109 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 AMN1Q8IY45 258 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 C11orf72Q8NBR9 251 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 MAP1LC3AQ9H492 121 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 TP53TG1Q9Y2A0 90 aa3.58□□□□□ -1.84
CHD9-205ENST00000562785 MUC21A0A0G2JKD1 596 aa3.57□□□□□ -1.84
CHD9-205ENST00000562785 MUC21A0A140T8X8 626 aa3.57□□□□□ -1.84
CHD9-205ENST00000562785 D6R8Y8 96 aa3.57□□□□□ -1.84
CHD9-205ENST00000562785 K7EMI3 77 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms