RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 ZMAT4Q9H898 229 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
SPG7-206ENST00000562775 CYSLTR1Q9Y271 337 aa9.88□□□□□ -0.83
SPG7-206ENST00000562775 IGHV3-38A0A0C4DH36 116 aa9.87□□□□□ -0.83
SPG7-206ENST00000562775 LOC100131303A0A0U1RQF7 123 aa9.87□□□□□ -0.83
SPG7-206ENST00000562775 ATP5LO75964 103 aa9.87□□□□□ -0.83
SPG7-206ENST00000562775 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
SPG7-206ENST00000562775 SYS1-DBNDD2H3BUS1 97 aa9.86□□□□□ -0.83
SPG7-206ENST00000562775 PAX4O43316 350 aa9.86□□□□□ -0.83
SPG7-206ENST00000562775 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
SPG7-206ENST00000562775 C20orf203Q8NBC4 194 aa9.86□□□□□ -0.83
SPG7-206ENST00000562775 F5H768 121 aa9.85□□□□□ -0.83
SPG7-206ENST00000562775 SCGB1D1O95968 90 aa9.85□□□□□ -0.83
SPG7-206ENST00000562775 PET117Q6UWS5 81 aa9.85□□□□□ -0.83
SPG7-206ENST00000562775 LINC00518Q8N0U6 118 aa9.85□□□□□ -0.83
SPG7-206ENST00000562775 SCGB3A1Q96QR1 104 aa9.85□□□□□ -0.83
SPG7-206ENST00000562775 B9D2Q9BPU9 175 aa9.85□□□□□ -0.83
SPG7-206ENST00000562775 GYPEP15421 78 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 HTN3P15516 51 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 ERASQ7Z444 233 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 SPATA12Q7Z6I5 190 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 Q8N976 141 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 VSIG2Q96IQ7 327 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.84□□□□□ -0.83
SPG7-206ENST00000562775 RPL39P62891 51 aaKnown RBP9.84□□□□□ -0.83
SPG7-206ENST00000562775 C11orf45Q8TAV5 145 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 C12orf57Q99622 126 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 CHCHD7Q9BUK0 85 aa9.84□□□□□ -0.83
SPG7-206ENST00000562775 TRAV26-1A0A087WT03 109 aa9.83□□□□□ -0.84
SPG7-206ENST00000562775 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
SPG7-206ENST00000562775 TENM3Q9P273 2699 aa9.83□□□□□ -0.84
SPG7-206ENST00000562775 A0A0J9YY99 117 aa9.82□□□□□ -0.84
SPG7-206ENST00000562775 C20orf202A1L168 122 aa9.82□□□□□ -0.84
SPG7-206ENST00000562775 IGIPA6NJ69 53 aa9.82□□□□□ -0.84
SPG7-206ENST00000562775 NTM-AS1Q6ZSK4 140 aa9.82□□□□□ -0.84
SPG7-206ENST00000562775 Q6ZTC4 211 aa9.82□□□□□ -0.84
SPG7-206ENST00000562775 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
SPG7-206ENST00000562775 TIMM17AQ99595 171 aa9.82□□□□□ -0.84
SPG7-206ENST00000562775 PRSS1P07477 247 aa9.81□□□□□ -0.84
SPG7-206ENST00000562775 NANOS2P60321 138 aaKnown RBP9.81□□□□□ -0.84
SPG7-206ENST00000562775 TMEM97Q5BJF2 176 aa9.81□□□□□ -0.84
SPG7-206ENST00000562775 Q6ZN92 141 aa9.81□□□□□ -0.84
SPG7-206ENST00000562775 TMEM141Q96I45 108 aa9.81□□□□□ -0.84
SPG7-206ENST00000562775 DNHD1Q96M86 4753 aa9.8□□□□□ -0.84
SPG7-206ENST00000562775 H0Y8G0 127 aa9.8□□□□□ -0.84
SPG7-206ENST00000562775 LINC01545Q5VT33 79 aa9.8□□□□□ -0.84
SPG7-206ENST00000562775 H3BNG1 76 aa9.8□□□□□ -0.84
SPG7-206ENST00000562775 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
SPG7-206ENST00000562775 LGALS9CQ6DKI2 356 aa9.8□□□□□ -0.84
SPG7-206ENST00000562775 CDPF1Q6NVV7 123 aa9.8□□□□□ -0.84
SPG7-206ENST00000562775 PYGO1Q9Y3Y4 419 aa9.8□□□□□ -0.84
SPG7-206ENST00000562775 TRBV25-1A0A075B6N4 114 aa9.79□□□□□ -0.84
SPG7-206ENST00000562775 TRBV6-8A0A0A6YYG3 113 aa9.79□□□□□ -0.84
SPG7-206ENST00000562775 DEFA6Q01524 100 aa9.79□□□□□ -0.84
SPG7-206ENST00000562775 ICOSQ9Y6W8 199 aa9.79□□□□□ -0.84
SPG7-206ENST00000562775 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.78□□□□□ -0.84
SPG7-206ENST00000562775 IGKV2-29A2NJV5 120 aaPredicted RBP9.78□□□□□ -0.84
SPG7-206ENST00000562775 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
SPG7-206ENST00000562775 TEX43Q6ZNM6 134 aa9.78□□□□□ -0.84
SPG7-206ENST00000562775 SH2D6Q7Z4S9 175 aa9.78□□□□□ -0.84
SPG7-206ENST00000562775 BAALCQ8WXS3 180 aa9.78□□□□□ -0.84
SPG7-206ENST00000562775 TMEM243Q9BU79 118 aa9.78□□□□□ -0.84
SPG7-206ENST00000562775 TIMM21Q9BVV7 248 aa9.78□□□□□ -0.84
SPG7-206ENST00000562775 SPANXA1Q9NS26 97 aa9.78□□□□□ -0.84
SPG7-206ENST00000562775 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
SPG7-206ENST00000562775 DEFB131BA0A096LNP1 70 aa9.77□□□□□ -0.85
SPG7-206ENST00000562775 TRAV12-1A0A0B4J245 112 aa9.77□□□□□ -0.85
SPG7-206ENST00000562775 NPSP0C0P6 89 aa9.77□□□□□ -0.85
SPG7-206ENST00000562775 ODF1Q14990 250 aa9.77□□□□□ -0.85
SPG7-206ENST00000562775 A0A087WX48 190 aa9.76□□□□□ -0.85
SPG7-206ENST00000562775 A0A096LPF7 62 aa9.76□□□□□ -0.85
SPG7-206ENST00000562775 H7C423 109 aa9.76□□□□□ -0.85
SPG7-206ENST00000562775 S100A12P80511 92 aa9.76□□□□□ -0.85
SPG7-206ENST00000562775 SMAGPQ0VAQ4 97 aa9.76□□□□□ -0.85
SPG7-206ENST00000562775 PAPPA-AS1Q5QFB9 102 aa9.76□□□□□ -0.85
SPG7-206ENST00000562775 PMCHL2Q9BQD1 86 aa9.76□□□□□ -0.85
SPG7-206ENST00000562775 IGLV4-3A0A075B6K6 122 aa9.75□□□□□ -0.85
SPG7-206ENST00000562775 TRAV10A0A0B4J240 114 aa9.75□□□□□ -0.85
SPG7-206ENST00000562775 PMVKQ15126 192 aa9.75□□□□□ -0.85
SPG7-206ENST00000562775 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
SPG7-206ENST00000562775 HUWE1Q7Z6Z7 4374 aaKnown RBP9.75□□□□□ -0.85
SPG7-206ENST00000562775 UBE2L6O14933 153 aa9.75□□□□□ -0.85
SPG7-206ENST00000562775 FGF6P10767 208 aa9.75□□□□□ -0.85
SPG7-206ENST00000562775 CEMP1Q6PRD7 247 aaPredicted RBP9.75□□□□□ -0.85
SPG7-206ENST00000562775 ATOH7Q8N100 152 aa9.75□□□□□ -0.85
SPG7-206ENST00000562775 OPRPNQ99935 248 aaPredicted RBP9.75□□□□□ -0.85
SPG7-206ENST00000562775 CSDC2Q9Y534 153 aaKnown RBP9.75□□□□□ -0.85
SPG7-206ENST00000562775 PRSS29PA6NIE9 313 aa9.74□□□□□ -0.85
SPG7-206ENST00000562775 MRPS36P82909 103 aaKnown RBP9.74□□□□□ -0.85
SPG7-206ENST00000562775 DGAT2L7PQ6IED9 249 aa9.74□□□□□ -0.85
SPG7-206ENST00000562775 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
SPG7-206ENST00000562775 VCX2Q9H322 139 aa9.74□□□□□ -0.85
SPG7-206ENST00000562775 CST9LQ9H4G1 147 aa9.74□□□□□ -0.85
SPG7-206ENST00000562775 F8VRH5 84 aa9.73□□□□□ -0.85
SPG7-206ENST00000562775 CHCHD5Q9BSY4 110 aa9.73□□□□□ -0.85
SPG7-206ENST00000562775 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
SPG7-206ENST00000562775 MRPL35Q9NZE8 188 aaKnown RBP9.73□□□□□ -0.85
SPG7-206ENST00000562775 CHTOPQ9Y3Y2 248 aaKnown RBP9.73□□□□□ -0.85
SPG7-206ENST00000562775 TRAV9-2A0A087WT02 112 aa9.72□□□□□ -0.85
SPG7-206ENST00000562775 DPM2O94777 84 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms