RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 SMR3BP02814 79 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-210ENST00000559092 TSKUQ8WUA8 353 aa11.52□□□□□ -0.57
SMAD3-210ENST00000559092 OSTCQ9NRP0 149 aa11.52□□□□□ -0.57
SMAD3-210ENST00000559092 FAM74A3Q4VXF1 159 aa11.51□□□□□ -0.57
SMAD3-210ENST00000559092 BORCS7Q96B45 105 aa11.51□□□□□ -0.57
SMAD3-210ENST00000559092 TRAV8-4A0A0B4J246 113 aa11.5□□□□□ -0.57
SMAD3-210ENST00000559092 TRAV26-2A0A0B4J265 109 aa11.5□□□□□ -0.57
SMAD3-210ENST00000559092 UBE2L6O14933 153 aa11.5□□□□□ -0.57
SMAD3-210ENST00000559092 INAFM2P0DMQ5 153 aa11.5□□□□□ -0.57
SMAD3-210ENST00000559092 AMTP48728 403 aa11.5□□□□□ -0.57
SMAD3-210ENST00000559092 REG3AQ06141 175 aa11.5□□□□□ -0.57
SMAD3-210ENST00000559092 C20orf203Q8NBC4 194 aa11.5□□□□□ -0.57
SMAD3-210ENST00000559092 USP17L23D6RBM5 183 aa11.49□□□□□ -0.57
SMAD3-210ENST00000559092 NCR2O95944 276 aa11.49□□□□□ -0.57
SMAD3-210ENST00000559092 HAMPP81172 84 aa11.49□□□□□ -0.57
SMAD3-210ENST00000559092 KRTAP26-1Q6PEX3 210 aa11.49□□□□□ -0.57
SMAD3-210ENST00000559092 SRRM2Q9UQ35 2752 aaKnown RBP11.49□□□□□ -0.57
SMAD3-210ENST00000559092 A0A1B0GUT8 65 aa11.48□□□□□ -0.57
SMAD3-210ENST00000559092 HIGD1CA8MV81 97 aa11.48□□□□□ -0.57
SMAD3-210ENST00000559092 HLA-DQA1P01909 254 aa11.48□□□□□ -0.57
SMAD3-210ENST00000559092 TMEM241Q24JQ0 296 aa11.48□□□□□ -0.57
SMAD3-210ENST00000559092 DGAT2L7PQ6IED9 249 aa11.48□□□□□ -0.57
SMAD3-210ENST00000559092 CLPSL2Q6UWE3 100 aa11.48□□□□□ -0.57
SMAD3-210ENST00000559092 IGLV4-60A0A075B6I1 120 aa11.47□□□□□ -0.57
SMAD3-210ENST00000559092 H7C423 109 aa11.47□□□□□ -0.57
SMAD3-210ENST00000559092 CLRN3Q8NCR9 226 aa11.47□□□□□ -0.57
SMAD3-210ENST00000559092 RPL39LQ96EH5 51 aaKnown RBP11.47□□□□□ -0.57
SMAD3-210ENST00000559092 TMEM191AQ9H0A3 160 aa11.47□□□□□ -0.57
SMAD3-210ENST00000559092 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
SMAD3-210ENST00000559092 TRBV6-5A0A0K0K1A5 114 aa11.46□□□□□ -0.57
SMAD3-210ENST00000559092 LINC01620Q4KN68 170 aa11.46□□□□□ -0.57
SMAD3-210ENST00000559092 SDHAF1A6NFY7 115 aa11.45□□□□□ -0.58
SMAD3-210ENST00000559092 PEA15Q15121 130 aa11.45□□□□□ -0.58
SMAD3-210ENST00000559092 DEFB104AQ8WTQ1 72 aa11.45□□□□□ -0.58
SMAD3-210ENST00000559092 CHAC1Q9BUX1 264 aa11.45□□□□□ -0.58
SMAD3-210ENST00000559092 V9GYV3 84 aa11.45□□□□□ -0.58
SMAD3-210ENST00000559092 I3L3M4 83 aa11.44□□□□□ -0.58
SMAD3-210ENST00000559092 PRSS1P07477 247 aa11.44□□□□□ -0.58
SMAD3-210ENST00000559092 ISOC2Q96AB3 205 aa11.44□□□□□ -0.58
SMAD3-210ENST00000559092 IGLV10-54A0A075B6I4 117 aa11.43□□□□□ -0.58
SMAD3-210ENST00000559092 APCSP02743 223 aa11.43□□□□□ -0.58
SMAD3-210ENST00000559092 RPL23P62829 140 aaKnown RBP11.43□□□□□ -0.58
SMAD3-210ENST00000559092 RIGQ13278 110 aa11.43□□□□□ -0.58
SMAD3-210ENST00000559092 MRAP2Q96G30 205 aa11.43□□□□□ -0.58
SMAD3-210ENST00000559092 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
SMAD3-210ENST00000559092 NAT8Q9UHE5 227 aa11.43□□□□□ -0.58
SMAD3-210ENST00000559092 C9JQL5 133 aa11.42□□□□□ -0.58
SMAD3-210ENST00000559092 RAB4AP20338 218 aa11.42□□□□□ -0.58
SMAD3-210ENST00000559092 PMCHP20382 165 aa11.42□□□□□ -0.58
SMAD3-210ENST00000559092 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
SMAD3-210ENST00000559092 NUP35Q8NFH5 326 aa11.42□□□□□ -0.58
SMAD3-210ENST00000559092 NAT8BQ9UHF3 227 aa11.42□□□□□ -0.58
SMAD3-210ENST00000559092 PLA2G1BP04054 148 aaKnown RBP11.41□□□□□ -0.58
SMAD3-210ENST00000559092 SCXQ7RTU7 201 aa11.41□□□□□ -0.58
SMAD3-210ENST00000559092 C9orf163Q8N9P6 203 aa11.41□□□□□ -0.58
SMAD3-210ENST00000559092 RNF185Q96GF1 192 aa11.41□□□□□ -0.58
SMAD3-210ENST00000559092 PPP1R17O96001 155 aa11.4□□□□□ -0.58
SMAD3-210ENST00000559092 ADIRFQ15847 76 aa11.4□□□□□ -0.58
SMAD3-210ENST00000559092 LINC00528Q8N1L1 170 aa11.4□□□□□ -0.58
SMAD3-210ENST00000559092 GAS8-AS1O95177 125 aa11.39□□□□□ -0.59
SMAD3-210ENST00000559092 FGF6P10767 208 aa11.39□□□□□ -0.59
SMAD3-210ENST00000559092 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
SMAD3-210ENST00000559092 POLR2KP53803 58 aaKnown RBP11.39□□□□□ -0.59
SMAD3-210ENST00000559092 CNBPP62633 177 aaKnown RBP11.39□□□□□ -0.59
SMAD3-210ENST00000559092 SRSF3P84103 164 aaKnown RBP11.39□□□□□ -0.59
SMAD3-210ENST00000559092 RNASEKQ6P5S7 137 aaKnown RBP11.39□□□□□ -0.59
SMAD3-210ENST00000559092 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-210ENST00000559092 TRBV27A0A0K0K1C4 114 aa11.38□□□□□ -0.59
SMAD3-210ENST00000559092 SMIM27A0A1W2PRY6 76 aa11.38□□□□□ -0.59
SMAD3-210ENST00000559092 IGKV2-29A2NJV5 120 aaPredicted RBP11.38□□□□□ -0.59
SMAD3-210ENST00000559092 ESDP10768 282 aa11.38□□□□□ -0.59
SMAD3-210ENST00000559092 CFAP161Q6P656 301 aa11.38□□□□□ -0.59
SMAD3-210ENST00000559092 AMN1Q8IY45 258 aa11.38□□□□□ -0.59
SMAD3-210ENST00000559092 CIRBP-AS1Q8TBR5 109 aa11.38□□□□□ -0.59
SMAD3-210ENST00000559092 MYCBP2O75592 4640 aa11.37□□□□□ -0.59
SMAD3-210ENST00000559092 A0A1B0GW15 77 aa11.37□□□□□ -0.59
SMAD3-210ENST00000559092 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
SMAD3-210ENST00000559092 TSHBP01222 138 aa11.37□□□□□ -0.59
SMAD3-210ENST00000559092 RPS10P46783 165 aaKnown RBP11.37□□□□□ -0.59
SMAD3-210ENST00000559092 VCYO14598 125 aa11.36□□□□□ -0.59
SMAD3-210ENST00000559092 TMEM101Q96IK0 257 aa11.36□□□□□ -0.59
SMAD3-210ENST00000559092 BTF3L4Q96K17 158 aa11.36□□□□□ -0.59
SMAD3-210ENST00000559092 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
SMAD3-210ENST00000559092 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
SMAD3-210ENST00000559092 SDIM1Q6ZPB5 146 aa11.35□□□□□ -0.59
SMAD3-210ENST00000559092 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-210ENST00000559092 IGKV3OR2-268A0A0C4DH90 116 aa11.34□□□□□ -0.59
SMAD3-210ENST00000559092 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
SMAD3-210ENST00000559092 MRPL52Q86TS9 123 aaKnown RBP11.34□□□□□ -0.59
SMAD3-210ENST00000559092 OR5A1Q8NGJ0 315 aa11.34□□□□□ -0.59
SMAD3-210ENST00000559092 CHCHD10Q8WYQ3 142 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-210ENST00000559092 TMEM242Q9NWH2 141 aa11.34□□□□□ -0.59
SMAD3-210ENST00000559092 DMBT1Q9UGM3 2413 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-210ENST00000559092 LINC00862A6NCI5 91 aa11.33□□□□□ -0.6
SMAD3-210ENST00000559092 PPP1R2P9O14990 202 aa11.33□□□□□ -0.6
SMAD3-210ENST00000559092 NRACQ8N912 160 aa11.33□□□□□ -0.6
SMAD3-210ENST00000559092 S100A8P05109 93 aa11.32□□□□□ -0.6
SMAD3-210ENST00000559092 SUMO2P61956 95 aaKnown RBP11.32□□□□□ -0.6
SMAD3-210ENST00000559092 HERC1Q15751 4861 aa11.32□□□□□ -0.6
SMAD3-210ENST00000559092 FLG2Q5D862 2391 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms