RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 RETNQ9HD89 108 aa11.39□□□□□ -0.59
CDC42BPB-204ENST00000559043 PTTG1IPP53801 180 aa11.38□□□□□ -0.59
CDC42BPB-204ENST00000559043 ZNF56Q15929 161 aa11.38□□□□□ -0.59
CDC42BPB-204ENST00000559043 FBN3Q75N90 2809 aa11.38□□□□□ -0.59
CDC42BPB-204ENST00000559043 A6NDN8 102 aa11.37□□□□□ -0.59
CDC42BPB-204ENST00000559043 PRSS29PA6NIE9 313 aa11.37□□□□□ -0.59
CDC42BPB-204ENST00000559043 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
CDC42BPB-204ENST00000559043 TRBV25-1A0A075B6N4 114 aa11.37□□□□□ -0.59
CDC42BPB-204ENST00000559043 TSHBP01222 138 aa11.37□□□□□ -0.59
CDC42BPB-204ENST00000559043 EDA2RQ9HAV5 297 aa11.37□□□□□ -0.59
CDC42BPB-204ENST00000559043 IGHV3OR16-12A0A075B7B8 117 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 INSP01308 110 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 PIK3CD-AS1Q5SR53 167 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 RNF183Q96D59 192 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 TMEM141Q96I45 108 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 TIMM17AQ99595 171 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 OVOL2Q9BRP0 275 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 LINC00467Q9BRT7 94 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 DNAH9Q9NYC9 4486 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 H3BRM9 83 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 VAMP3Q15836 100 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 MAPKAPK5-AS1Q8N8E1 139 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 PTH2Q96A98 100 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
CDC42BPB-204ENST00000559043 RHOHQ15669 191 aa11.35□□□□□ -0.59
CDC42BPB-204ENST00000559043 B9D2Q9BPU9 175 aa11.35□□□□□ -0.59
CDC42BPB-204ENST00000559043 TM2D3Q9BRN9 247 aa11.35□□□□□ -0.59
CDC42BPB-204ENST00000559043 X6R8D5 127 aa11.35□□□□□ -0.59
CDC42BPB-204ENST00000559043 AZU1P20160 251 aa11.34□□□□□ -0.59
CDC42BPB-204ENST00000559043 LINC01587Q99440 93 aa11.34□□□□□ -0.59
CDC42BPB-204ENST00000559043 RPL39P62891 51 aaKnown RBP11.34□□□□□ -0.59
CDC42BPB-204ENST00000559043 HUWE1Q7Z6Z7 4374 aaKnown RBP11.33□□□□□ -0.6
CDC42BPB-204ENST00000559043 TRAV8-6A0A0B4J262 113 aa11.33□□□□□ -0.6
CDC42BPB-204ENST00000559043 M0R2P5 195 aa11.33□□□□□ -0.6
CDC42BPB-204ENST00000559043 HTN1P15515 57 aa11.33□□□□□ -0.6
CDC42BPB-204ENST00000559043 PMVKQ15126 192 aa11.33□□□□□ -0.6
CDC42BPB-204ENST00000559043 UFSP1Q6NVU6 142 aa11.33□□□□□ -0.6
CDC42BPB-204ENST00000559043 IGLV4-69A0A075B6H9 119 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 E9PLD3 99 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 ZNF415Q09FC8 603 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 OR11H2Q8NH07 326 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 CST9LQ9H4G1 147 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 C9orf118A6NHY6 69 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 A8MWV9 139 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 AMMECR1LQ6DCA0 310 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 DEFB104AQ8WTQ1 72 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 TM2D2Q9BX73 214 aa11.32□□□□□ -0.6
CDC42BPB-204ENST00000559043 I3L3M4 83 aa11.31□□□□□ -0.6
CDC42BPB-204ENST00000559043 P0DMU3 169 aa11.31□□□□□ -0.6
CDC42BPB-204ENST00000559043 FAM231AP0DMU4 169 aa11.31□□□□□ -0.6
CDC42BPB-204ENST00000559043 FAM231CP0DMU5 169 aa11.31□□□□□ -0.6
CDC42BPB-204ENST00000559043 TAL2Q16559 108 aa11.31□□□□□ -0.6
CDC42BPB-204ENST00000559043 C11orf72Q8NBR9 251 aa11.31□□□□□ -0.6
CDC42BPB-204ENST00000559043 MYMXA0A1B0GTQ4 84 aa11.3□□□□□ -0.6
CDC42BPB-204ENST00000559043 GCSHP23434 173 aa11.3□□□□□ -0.6
CDC42BPB-204ENST00000559043 FXYD2P54710 66 aa11.3□□□□□ -0.6
CDC42BPB-204ENST00000559043 CEND1Q8N111 149 aa11.3□□□□□ -0.6
CDC42BPB-204ENST00000559043 NACAE9PAV3 2078 aa11.3□□□□□ -0.6
CDC42BPB-204ENST00000559043 PLAC8L1A1L4L8 177 aa11.29□□□□□ -0.6
CDC42BPB-204ENST00000559043 C11orf86A6NJI1 115 aa11.29□□□□□ -0.6
CDC42BPB-204ENST00000559043 DEFB4AO15263 64 aa11.29□□□□□ -0.6
CDC42BPB-204ENST00000559043 C20orf203Q8NBC4 194 aa11.29□□□□□ -0.6
CDC42BPB-204ENST00000559043 Q8NAQ8 132 aa11.28□□□□□ -0.6
CDC42BPB-204ENST00000559043 OR4C5Q8NGB2 326 aa11.28□□□□□ -0.6
CDC42BPB-204ENST00000559043 SPATA25Q9BR10 227 aa11.28□□□□□ -0.6
CDC42BPB-204ENST00000559043 PRADC1Q9BSG0 188 aa11.28□□□□□ -0.6
CDC42BPB-204ENST00000559043 SPXQ9BT56 116 aa11.28□□□□□ -0.6
CDC42BPB-204ENST00000559043 K7EP13 123 aa11.27□□□□□ -0.61
CDC42BPB-204ENST00000559043 CFAP126Q5VTH2 177 aa11.27□□□□□ -0.61
CDC42BPB-204ENST00000559043 RNASE8Q8TDE3 154 aaKnown RBP11.27□□□□□ -0.61
CDC42BPB-204ENST00000559043 IGHV3-73A0A0B4J1V6 119 aa11.27□□□□□ -0.61
CDC42BPB-204ENST00000559043 IGHV4-28A0A0C4DH34 117 aa11.27□□□□□ -0.61
CDC42BPB-204ENST00000559043 SMIM13P0DJ93 91 aa11.27□□□□□ -0.61
CDC42BPB-204ENST00000559043 RRN3P1Q2M238 152 aa11.27□□□□□ -0.61
CDC42BPB-204ENST00000559043 TRBV7-3A0A075B6L6 115 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 H3BUT2 72 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 RHODO00212 210 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 NFE4Q86UQ8 179 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 ZNRF2Q8NHG8 242 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 HERVK_113P61574 105 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 Q6ZSN1 163 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 RAB37Q96AX2 223 aa11.25□□□□□ -0.61
CDC42BPB-204ENST00000559043 TGP01266 2768 aa11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 RS1O15537 224 aa11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 MIFP14174 115 aa11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 EMP1P54849 157 aa11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 IL17DQ8TAD2 202 aa11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 TMEM263Q8WUH6 116 aaKnown RBP11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 PYGO1Q9Y3Y4 419 aa11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 TNFRSF18Q9Y5U5 241 aa11.24□□□□□ -0.61
CDC42BPB-204ENST00000559043 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 OPRPNQ99935 248 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 STAB2Q8WWQ8 2551 aa11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 IGLV4-3A0A075B6K6 122 aa11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 A0A1W2PPM0 123 aa11.23□□□□□ -0.61
CDC42BPB-204ENST00000559043 GAGE10A6NGK3 116 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms