RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 TRBV10-1A0A0K0K1A3 114 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 SCO2A0A1W2PP80 73 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 K7ERU9 68 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 M0R381 172 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 RHODO00212 210 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 PPP1R2P9O14990 202 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 SNAI2O43623 268 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 IGLV2-8P01709 118 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 CCL20P78556 96 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 COL5A1-AS1Q5SY13 56 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 FAM74A4Q5TZK3 123 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 KRTAP26-1Q6PEX3 210 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 ENHOQ6UWT2 76 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 ALKAL2Q6UX46 152 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 NTM-AS1Q6ZSK4 140 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 SYT8Q8NBV8 401 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 OR10AG1Q8NH19 301 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 BAALCQ8WXS3 180 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 PACRGQ96M98 296 aaPredicted RBP3.62□□□□□ -1.83
SMAD3-209ENST00000558894 TM2D2Q9BX73 214 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 PHLDA3Q9Y5J5 127 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
SMAD3-209ENST00000558894 TRBV7-3A0A075B6L6 115 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 BCL2L11O43521 198 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 CXCL1P09341 107 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 OR5AL1P0C617 328 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 IGLC6P0CF74 106 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 TPT1P13693 172 aaKnown RBP3.61□□□□□ -1.83
SMAD3-209ENST00000558894 ADCYAP1P18509 176 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 UBE2G1P62253 170 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 IQCJQ1A5X6 159 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 CST9LP1Q5W188 147 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 SCXQ7RTU7 201 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 NEXN-AS1Q8NBZ9 246 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 DERL1Q9BUN8 251 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 VAX2Q9UIW0 290 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 KLK12Q9UKR0 248 aa3.61□□□□□ -1.83
SMAD3-209ENST00000558894 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.6□□□□□ -1.83
SMAD3-209ENST00000558894 TRBV6-8A0A0A6YYG3 113 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 MUC21A0A0G2JKD1 596 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 MUC21A0A140T8X8 626 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 A0A1B0GV50 99 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 KANTRA0A1W2PQU2 76 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 C19orf71A6NCJ1 209 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 UMAD1C9J7I0 102 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 FAM229AH3BQW9 127 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 H3BS24 57 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 AKR1C3P42330 323 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 MPV17L2Q567V2 206 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 LINC01551Q86U37 167 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 OR10D4PQ8NGN7 298 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 FAM213BQ8TBF2 198 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 C11orf52Q96A22 123 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 ALKBH7Q9BT30 221 aaPredicted RBP3.6□□□□□ -1.83
SMAD3-209ENST00000558894 CHCHD7Q9BUK0 85 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 ZNF471Q9BX82 626 aaPredicted RBP3.6□□□□□ -1.83
SMAD3-209ENST00000558894 SMDT1Q9H4I9 107 aa3.6□□□□□ -1.83
SMAD3-209ENST00000558894 TRBV20OR9-2A0A075B6H5 130 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 IGKV2D-24A0A075B6R9 120 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 TGIF2-C20orf24A0A0A6YYL0 155 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 TRAV1-1A0A0B4J248 108 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 KRTAP29-1A8MX34 341 aaPredicted RBP3.59□□□□□ -1.83
SMAD3-209ENST00000558894 M0QY20 66 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 GZMBP10144 247 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 PTTG1IPP53801 180 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 RPL36AP83881 106 aaKnown RBP3.59□□□□□ -1.83
SMAD3-209ENST00000558894 UBE2V1Q13404 147 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 COA6Q5JTJ3 125 aaKnown RBP3.59□□□□□ -1.83
SMAD3-209ENST00000558894 BAGE2Q86Y30 109 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 ZNF664Q8N3J9 261 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 Q8N976 141 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 CIRBP-AS1Q8TBR5 109 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 RPL36ALQ969Q0 106 aaKnown RBP3.59□□□□□ -1.83
SMAD3-209ENST00000558894 UBE2WQ96B02 151 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 CHAC1Q9BUX1 264 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 PRR34Q9NV39 138 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 COX11Q9Y6N1 276 aa3.59□□□□□ -1.83
SMAD3-209ENST00000558894 TNXBP22105 4242 aa3.59□□□□□ -1.84
SMAD3-209ENST00000558894 RBFOX3A6NFN3 312 aa3.58□□□□□ -1.84
SMAD3-209ENST00000558894 IFITM10A6NMD0 228 aa3.58□□□□□ -1.84
SMAD3-209ENST00000558894 PANO1I0J062 215 aa3.58□□□□□ -1.84
SMAD3-209ENST00000558894 PRSS1P07477 247 aa3.58□□□□□ -1.84
SMAD3-209ENST00000558894 LORP23490 312 aaPredicted RBP3.58□□□□□ -1.84
SMAD3-209ENST00000558894 ZNF56Q15929 161 aa3.58□□□□□ -1.84
SMAD3-209ENST00000558894 SPANXA1Q9NS26 97 aa3.58□□□□□ -1.84
SMAD3-209ENST00000558894 URGCP-MRPS24S4R325 110 aa3.58□□□□□ -1.84
SMAD3-209ENST00000558894 A0A087WX48 190 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 PHOX2AO14813 284 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 HNRNPA3P51991 378 aaKnown RBP3.57□□□□□ -1.84
SMAD3-209ENST00000558894 NDUFA6P56556 154 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 Q0VG73 95 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 ELOBQ15370 118 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 CENPWQ5EE01 88 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 SUMO4Q6EEV6 95 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 RMI2Q96E14 147 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 YPEL4Q96NS1 127 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 MIEN1Q9BRT3 115 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 GFRA4Q9GZZ7 299 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 220.7 ms