RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SIVA1O15304 175 aa5.96□□□□□ -1.46
ATXN3-235ENST00000556082 TSHBP01222 138 aa5.96□□□□□ -1.46
ATXN3-235ENST00000556082 IGKCP01834 107 aa5.96□□□□□ -1.46
ATXN3-235ENST00000556082 NPSP0C0P6 89 aa5.96□□□□□ -1.46
ATXN3-235ENST00000556082 GTSCR1Q86UQ5 136 aa5.96□□□□□ -1.46
ATXN3-235ENST00000556082 C16orf74Q96GX8 76 aa5.96□□□□□ -1.46
ATXN3-235ENST00000556082 WNK1Q9H4A3 2382 aa5.96□□□□□ -1.46
ATXN3-235ENST00000556082 TRBV10-1A0A0K0K1A3 114 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 P0DMU3 169 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 FAM231AP0DMU4 169 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 FAM231CP0DMU5 169 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 RPL35AP18077 110 aaKnown RBP5.95□□□□□ -1.46
ATXN3-235ENST00000556082 NEGR1Q7Z3B1 354 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 BOD1L2Q8IYS8 172 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 BAALCQ8WXS3 180 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 MRPL16Q9NX20 251 aaKnown RBP5.95□□□□□ -1.46
ATXN3-235ENST00000556082 MRPL35Q9NZE8 188 aaKnown RBP5.95□□□□□ -1.46
ATXN3-235ENST00000556082 PYGO1Q9Y3Y4 419 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 TNFRSF18Q9Y5U5 241 aa5.95□□□□□ -1.46
ATXN3-235ENST00000556082 TRAV4A0A0B4J268 109 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 PLAC8L1A1L4L8 177 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 SMIM9A6NGZ8 99 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 FGF6P10767 208 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 CRYBA4P53673 196 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 PMVKQ15126 192 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 PAPPA-AS1Q5QFB9 102 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 STPG4Q8N801 248 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 OR4C5Q8NGB2 326 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 KIR2DL5BQ8NHK3 375 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 WFDC10AQ9H1F0 79 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 TP53TG1Q9Y2A0 90 aa5.94□□□□□ -1.46
ATXN3-235ENST00000556082 CHTOPQ9Y3Y2 248 aaKnown RBP5.94□□□□□ -1.46
ATXN3-235ENST00000556082 IGHV3OR16-12A0A075B7B8 117 aa5.93□□□□□ -1.46
ATXN3-235ENST00000556082 TRGV1A0A0A0MS02 117 aa5.93□□□□□ -1.46
ATXN3-235ENST00000556082 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
ATXN3-235ENST00000556082 RRN3P1Q2M238 152 aa5.93□□□□□ -1.46
ATXN3-235ENST00000556082 LURAP1LQ8IV03 231 aa5.93□□□□□ -1.46
ATXN3-235ENST00000556082 CST9LQ9H4G1 147 aa5.93□□□□□ -1.46
ATXN3-235ENST00000556082 IGHV3-73A0A0B4J1V6 119 aa5.92□□□□□ -1.46
ATXN3-235ENST00000556082 COL5A1-AS1Q5SY13 56 aa5.92□□□□□ -1.46
ATXN3-235ENST00000556082 C12orf54Q6X4T0 127 aa5.92□□□□□ -1.46
ATXN3-235ENST00000556082 Q6ZTI0 123 aa5.92□□□□□ -1.46
ATXN3-235ENST00000556082 C2orf91Q6ZV80 131 aa5.92□□□□□ -1.46
ATXN3-235ENST00000556082 LINC00612Q8N6U2 182 aa5.92□□□□□ -1.46
ATXN3-235ENST00000556082 NOP10Q9NPE3 64 aaKnown RBP5.92□□□□□ -1.46
ATXN3-235ENST00000556082 TRBV7-3A0A075B6L6 115 aa5.91□□□□□ -1.46
ATXN3-235ENST00000556082 RPL39P62891 51 aaKnown RBP5.91□□□□□ -1.46
ATXN3-235ENST00000556082 ZC2HC1BQ5TFG8 222 aa5.91□□□□□ -1.46
ATXN3-235ENST00000556082 DAZ4Q86SG3 579 aaKnown RBP5.91□□□□□ -1.46
ATXN3-235ENST00000556082 SPATA3Q8NHX4 192 aa5.91□□□□□ -1.46
ATXN3-235ENST00000556082 DAZ3Q9NR90 486 aaKnown RBP5.91□□□□□ -1.46
ATXN3-235ENST00000556082 SPANXA1Q9NS26 97 aa5.91□□□□□ -1.46
ATXN3-235ENST00000556082 HIGD1BQ9P298 99 aa5.91□□□□□ -1.46
ATXN3-235ENST00000556082 CUBNO60494 3623 aa5.91□□□□□ -1.46
ATXN3-235ENST00000556082 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 TRBV6-4A0A1B0GX49 114 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 APOC4P55056 127 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 RPL36AP83881 106 aaKnown RBP5.9□□□□□ -1.46
ATXN3-235ENST00000556082 COTL1Q14019 142 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 NFE4Q86UQ8 179 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 RPL36ALQ969Q0 106 aaKnown RBP5.9□□□□□ -1.46
ATXN3-235ENST00000556082 ZNF479Q96JC4 524 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 CHCHD7Q9BUK0 85 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 TIMM21Q9BVV7 248 aa5.9□□□□□ -1.46
ATXN3-235ENST00000556082 IGKV2D-26A0A0A0MRZ7 120 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 E9PLD3 99 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 K7EQD1 137 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 NMUP48645 174 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 BVES-AS1Q5T3Y7 98 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 PCP2Q8IVA1 136 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 AMELXQ99217 191 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 VCX2Q9H322 139 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 Q9UF83 564 aa5.89□□□□□ -1.47
ATXN3-235ENST00000556082 F8P00451 2351 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 FLNBO75369 2602 aaKnown RBP5.88□□□□□ -1.47
ATXN3-235ENST00000556082 IGLV4-3A0A075B6K6 122 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 TRGV2A0A075B6R0 118 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE12BA1L429 117 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 C11orf86A6NJI1 115 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE7O76087 117 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE12FP0CL80 117 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE12GP0CL81 117 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 GAGE12IP0CL82 117 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 HINT1P49773 126 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-235ENST00000556082 UBE2D3P61077 147 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 UBE2D2P62837 147 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 MRPS36P82909 103 aaKnown RBP5.88□□□□□ -1.47
ATXN3-235ENST00000556082 KRTAP24-1Q3LI83 254 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 MPV17L2Q567V2 206 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 TMEM97Q5BJF2 176 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 SLC25A29Q8N8R3 303 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 ZNRF2Q8NHG8 242 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 FAM104AQ969W3 186 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 GTSF1LQ9H1H1 148 aa5.88□□□□□ -1.47
ATXN3-235ENST00000556082 ZMAT5Q9UDW3 170 aaKnown RBP5.88□□□□□ -1.47
ATXN3-235ENST00000556082 CSDC2Q9Y534 153 aaKnown RBP5.88□□□□□ -1.47
ATXN3-235ENST00000556082 A0A1B0GV90 55 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms