RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 MLH3Q9UHC1 1453 aa1.99□□□□□ -2.09
KTN1-220ENST00000555172 PPLO60437 1756 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 PRRC2BQ5JSZ5 2229 aaKnown RBP1.98□□□□□ -2.09
KTN1-220ENST00000555172 IGHV3-30P01768 117 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 IGHV3-30-5P0DP03 117 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 TET3O43151 1660 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 LTBP2Q14767 1821 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 IGLV3-19P01714 112 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 COL4A2P08572 1712 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 COL4A6Q14031 1691 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 LINC00304Q8N9R0 145 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 TET1Q8NFU7 2136 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 KLK9Q9UKQ9 250 aa1.98□□□□□ -2.09
KTN1-220ENST00000555172 MYH4Q9Y623 1939 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 CTTNBP2Q8WZ74 1663 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 NRXN1Q9ULB1 1477 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 IGKV3D-7A0A0C4DH55 119 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 IGKV2-24A0A0C4DH68 120 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 IGKV3OR2-268A0A0C4DH90 116 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 HIGD1CA8MV81 97 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 HMGN4O00479 90 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 PPP1R17O96001 155 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 C10orf55Q5SWW7 151 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 LINC00299Q6ZSB3 139 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 NDUFA4L2Q9NRX3 87 aa1.97□□□□□ -2.09
KTN1-220ENST00000555172 ADAMTS12P58397 1594 aa1.96□□□□□ -2.09
KTN1-220ENST00000555172 ARHGEF12Q9NZN5 1544 aa1.96□□□□□ -2.09
KTN1-220ENST00000555172 MDC1Q14676 2089 aaKnown RBP1.96□□□□□ -2.1
KTN1-220ENST00000555172 ZNF56Q15929 161 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 SPATA45Q537H7 98 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 Q6ZRN7 208 aaPredicted RBP1.96□□□□□ -2.1
KTN1-220ENST00000555172 VMO1Q7Z5L0 202 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 CDC42SE2Q9NRR3 84 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 NWD2Q9ULI1 1742 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 ICE1Q9Y2F5 2266 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 SIP14410 1827 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 TRBV6-7A0A0A0MS04 114 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 KRTAP10-1P60331 282 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 COA5Q86WW8 74 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 TVP23CQ96ET8 276 aa1.96□□□□□ -2.1
KTN1-220ENST00000555172 IGKV1-17P01599 117 aa1.95□□□□□ -2.1
KTN1-220ENST00000555172 SSBP1Q04837 148 aaKnown RBP1.95□□□□□ -2.1
KTN1-220ENST00000555172 KLKP1Q107X0 134 aa1.95□□□□□ -2.1
KTN1-220ENST00000555172 CFAP126Q5VTH2 177 aa1.95□□□□□ -2.1
KTN1-220ENST00000555172 DYNLRB1Q9NP97 96 aa1.95□□□□□ -2.1
KTN1-220ENST00000555172 PLXNA1Q9UIW2 1896 aa1.95□□□□□ -2.1
KTN1-220ENST00000555172 POLA1P09884 1462 aaPredicted RBP1.95□□□□□ -2.1
KTN1-220ENST00000555172 ARFGEF1Q9Y6D6 1849 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 TRBV6-5A0A0K0K1A5 114 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 TMEM14DPA8MWL7 114 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 FXYD4P59646 89 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 SPAG11BQ08648 103 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 SPAG11AQ6PDA7 123 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 IGFL1Q6UW32 110 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 COX7B2Q8TF08 81 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 TXNDC17Q9BRA2 123 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 ARL2-SNX15V9GYD0 113 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 SDK1Q7Z5N4 2213 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 SUPT6HQ7KZ85 1726 aaKnown RBP1.94□□□□□ -2.1
KTN1-220ENST00000555172 ATP10BO94823 1461 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 KIF14Q15058 1648 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 TRBV25-1A0A075B6N4 114 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 NBDYA0A0U1RRE5 68 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 IGKV2-29A2NJV5 120 aaPredicted RBP1.94□□□□□ -2.1
KTN1-220ENST00000555172 CCL3L1P16619 93 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 SPINT3P49223 89 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 HEPN1Q6WQI6 88 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 TMEM14BQ9NUH8 114 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 PSENENQ9NZ42 101 aa1.94□□□□□ -2.1
KTN1-220ENST00000555172 KIF20BQ96Q89 1820 aa1.93□□□□□ -2.1
KTN1-220ENST00000555172 KANTRA0A1W2PQU2 76 aa1.93□□□□□ -2.1
KTN1-220ENST00000555172 F2Z2F3 143 aa1.93□□□□□ -2.1
KTN1-220ENST00000555172 F8WEM9 126 aa1.93□□□□□ -2.1
KTN1-220ENST00000555172 C18orf32Q8TCD1 76 aa1.93□□□□□ -2.1
KTN1-220ENST00000555172 M0R3E3 92 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 RPL37AP61513 92 aaKnown RBP1.92□□□□□ -2.1
KTN1-220ENST00000555172 SNRPFP62306 86 aaKnown RBP1.92□□□□□ -2.1
KTN1-220ENST00000555172 HCP5Q6MZN7 132 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 LINC00208Q96KT6 92 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 INTS1Q8N201 2190 aaKnown RBP1.92□□□□□ -2.1
KTN1-220ENST00000555172 NRXN2Q9P2S2 1712 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 COX6CP09669 75 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 FXYD3Q14802 87 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 XAF1Q6GPH4 301 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 PPP1R1CQ8WVI7 109 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 TMEM14CQ9P0S9 112 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 NEXMIFQ5QGS0 1516 aa1.92□□□□□ -2.1
KTN1-220ENST00000555172 FAM223BA6NKX1 122 aa1.91□□□□□ -2.1
KTN1-220ENST00000555172 ZNF815PA8K554 130 aa1.91□□□□□ -2.1
KTN1-220ENST00000555172 IQCF6A8MYZ5 107 aa1.91□□□□□ -2.1
KTN1-220ENST00000555172 ELOF1P60002 83 aaKnown RBP1.91□□□□□ -2.1
KTN1-220ENST00000555172 FDCSPQ8NFU4 85 aa1.91□□□□□ -2.1
KTN1-220ENST00000555172 ZNF625Q96I27 306 aaPredicted RBP1.91□□□□□ -2.1
KTN1-220ENST00000555172 TOP2BQ02880 1626 aa1.91□□□□□ -2.1
KTN1-220ENST00000555172 ZC3H13Q5T200 1668 aaKnown RBP1.91□□□□□ -2.1
KTN1-220ENST00000555172 MYO7BQ6PIF6 2116 aa1.91□□□□□ -2.1
KTN1-220ENST00000555172 A0A087WTM6 91 aa1.9□□□□□ -2.1
KTN1-220ENST00000555172 TMEM170BQ5T4T1 132 aa1.9□□□□□ -2.1
KTN1-220ENST00000555172 LINC00643Q86TS7 51 aa1.9□□□□□ -2.1
KTN1-220ENST00000555172 PROK2Q9HC23 129 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 169.5 ms