RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 A0A087WWL8 130 aa12.48□□□□□ -0.41
PCNX1-209ENST00000554879 TMEM61Q8N0U2 210 aa12.48□□□□□ -0.41
PCNX1-209ENST00000554879 TRGV11A0A075B6L2 103 aa12.48□□□□□ -0.41
PCNX1-209ENST00000554879 IGHV3-73A0A0B4J1V6 119 aa12.48□□□□□ -0.41
PCNX1-209ENST00000554879 F5H768 121 aa12.48□□□□□ -0.41
PCNX1-209ENST00000554879 TMEM89A2RUT3 159 aa12.47□□□□□ -0.41
PCNX1-209ENST00000554879 BSNQ9UPA5 3926 aa12.47□□□□□ -0.41
PCNX1-209ENST00000554879 GCN1Q92616 2671 aaKnown RBP12.47□□□□□ -0.41
PCNX1-209ENST00000554879 RBAKDNA6NC62 111 aa12.47□□□□□ -0.41
PCNX1-209ENST00000554879 HERVK_113P63121 156 aa12.47□□□□□ -0.41
PCNX1-209ENST00000554879 MRPL53Q96EL3 112 aaKnown RBP12.47□□□□□ -0.41
PCNX1-209ENST00000554879 Q8N1Y9 231 aa12.46□□□□□ -0.41
PCNX1-209ENST00000554879 A0A0U1RRA0 63 aa12.46□□□□□ -0.41
PCNX1-209ENST00000554879 GATD1Q8NB37 220 aa12.46□□□□□ -0.41
PCNX1-209ENST00000554879 TMEM86BQ8N661 226 aa12.46□□□□□ -0.42
PCNX1-209ENST00000554879 CRIP2P52943 208 aaPredicted RBP12.45□□□□□ -0.42
PCNX1-209ENST00000554879 TRACP01848 142 aa12.45□□□□□ -0.42
PCNX1-209ENST00000554879 C9orf47Q6ZRZ4 202 aa12.45□□□□□ -0.42
PCNX1-209ENST00000554879 A0A096LNT2 108 aa12.44□□□□□ -0.42
PCNX1-209ENST00000554879 FAM19A5Q7Z5A7 132 aaPredicted RBP12.44□□□□□ -0.42
PCNX1-209ENST00000554879 BRI3O95415 125 aa12.44□□□□□ -0.42
PCNX1-209ENST00000554879 CARD19Q96LW7 228 aa12.44□□□□□ -0.42
PCNX1-209ENST00000554879 TEP1Q99973 2627 aaKnown RBP12.44□□□□□ -0.42
PCNX1-209ENST00000554879 C4orf3Q8WVX3 66 aa12.44□□□□□ -0.42
PCNX1-209ENST00000554879 HRCT1Q6UXD1 115 aa12.43□□□□□ -0.42
PCNX1-209ENST00000554879 LINC01006Q8NI28 216 aa12.43□□□□□ -0.42
PCNX1-209ENST00000554879 TRAV13-1A0A0B4J241 112 aa12.42□□□□□ -0.42
PCNX1-209ENST00000554879 APCP25054 2843 aa12.42□□□□□ -0.42
PCNX1-209ENST00000554879 ZNF876PQ49A33 203 aa12.42□□□□□ -0.42
PCNX1-209ENST00000554879 ATRQ13535 2644 aa12.41□□□□□ -0.42
PCNX1-209ENST00000554879 F8VRH5 84 aa12.41□□□□□ -0.42
PCNX1-209ENST00000554879 IGKV3D-20A0A0C4DH25 116 aa12.41□□□□□ -0.42
PCNX1-209ENST00000554879 TRBV6-1A0A0K0K1D8 114 aa12.41□□□□□ -0.42
PCNX1-209ENST00000554879 U3KQE9 123 aa12.41□□□□□ -0.42
PCNX1-209ENST00000554879 ESM1Q9NQ30 184 aa12.41□□□□□ -0.42
PCNX1-209ENST00000554879 HIST1H4AP62805 103 aaKnown RBP12.4□□□□□ -0.42
PCNX1-209ENST00000554879 DPH3P1Q9H4G8 78 aa12.4□□□□□ -0.42
PCNX1-209ENST00000554879 IGHV1OR15-1A0A075B7D0 117 aa12.4□□□□□ -0.42
PCNX1-209ENST00000554879 LENEPQ9Y5L5 61 aa12.4□□□□□ -0.42
PCNX1-209ENST00000554879 A0A087WX48 190 aa12.39□□□□□ -0.43
PCNX1-209ENST00000554879 LINC01559Q495D7 138 aa12.39□□□□□ -0.43
PCNX1-209ENST00000554879 FHL3Q13643 280 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 IGHV3-53P01767 116 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 CFC1BP0CG36 223 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 CFC1P0CG37 223 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 SMCPP49901 116 aaPredicted RBP12.38□□□□□ -0.43
PCNX1-209ENST00000554879 DNAJC30Q96LL9 226 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 hADV29S1A0JD25 119 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 ADARB2-AS1A8MUL3 147 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 LINC01620Q4KN68 170 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 DGAT2L7PQ6IED9 249 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 PLEKHB2Q96CS7 222 aa12.38□□□□□ -0.43
PCNX1-209ENST00000554879 A0A0J9YX75 114 aa12.37□□□□□ -0.43
PCNX1-209ENST00000554879 K7EQG2 157 aa12.37□□□□□ -0.43
PCNX1-209ENST00000554879 INSP01308 110 aa12.37□□□□□ -0.43
PCNX1-209ENST00000554879 PRR9Q5T870 116 aa12.37□□□□□ -0.43
PCNX1-209ENST00000554879 C11orf21Q9P2W6 132 aa12.37□□□□□ -0.43
PCNX1-209ENST00000554879 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 NDUFA7O95182 113 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 IGLC6P0CF74 106 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 C19orf54Q5BKX5 351 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 TRGV1A0A0A0MS02 117 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 A0A0U1RQV1 116 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 M0R2P5 195 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 PHLDA1Q8WV24 401 aaPredicted RBP12.36□□□□□ -0.43
PCNX1-209ENST00000554879 CFHR3Q02985 330 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 NDUFA11Q86Y39 141 aa12.36□□□□□ -0.43
PCNX1-209ENST00000554879 UBR5O95071 2799 aaPredicted RBP12.36□□□□□ -0.43
PCNX1-209ENST00000554879 MORN3Q6PF18 240 aaPredicted RBP12.35□□□□□ -0.43
PCNX1-209ENST00000554879 Q8N8P6 123 aa12.35□□□□□ -0.43
PCNX1-209ENST00000554879 LGALS9O00182 355 aa12.35□□□□□ -0.43
PCNX1-209ENST00000554879 RNASE1P07998 156 aaKnown RBP12.35□□□□□ -0.43
PCNX1-209ENST00000554879 NHLRC4P0CG21 123 aaPredicted RBP12.35□□□□□ -0.43
PCNX1-209ENST00000554879 HILS1P60008 231 aa12.35□□□□□ -0.43
PCNX1-209ENST00000554879 ZFAND2AQ8N6M9 145 aa12.35□□□□□ -0.43
PCNX1-209ENST00000554879 A0A096LNJ9 63 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 PRO0461Q9UI25 63 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 TRAV25A0A0B4J276 109 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 IGHV3-16A0A0C4DH30 117 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 ORMDL2Q53FV1 153 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 C2orf66Q6UXQ4 117 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 DCANP1Q8TF63 244 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 GAS8-AS1O95177 125 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 HHLA3Q9XRX5 114 aa12.34□□□□□ -0.43
PCNX1-209ENST00000554879 FSHBP01225 129 aa12.33□□□□□ -0.44
PCNX1-209ENST00000554879 DEFB114Q30KQ6 69 aa12.33□□□□□ -0.44
PCNX1-209ENST00000554879 ZNF493Q6ZR52 646 aa12.33□□□□□ -0.44
PCNX1-209ENST00000554879 KRTAP1-3Q8IUG1 177 aa12.33□□□□□ -0.44
PCNX1-209ENST00000554879 JPT2Q9H910 190 aa12.33□□□□□ -0.44
PCNX1-209ENST00000554879 ZNF415Q09FC8 603 aa12.33□□□□□ -0.44
PCNX1-209ENST00000554879 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
PCNX1-209ENST00000554879 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
PCNX1-209ENST00000554879 PPP1R17O96001 155 aa12.31□□□□□ -0.44
PCNX1-209ENST00000554879 MAP6D1Q9H9H5 199 aa12.31□□□□□ -0.44
PCNX1-209ENST00000554879 C3orf22Q8N5N4 141 aa12.31□□□□□ -0.44
PCNX1-209ENST00000554879 RNF152Q8N8N0 203 aa12.31□□□□□ -0.44
PCNX1-209ENST00000554879 A0A1B0GX51 115 aa12.3□□□□□ -0.44
PCNX1-209ENST00000554879 DNAL4O96015 105 aa12.3□□□□□ -0.44
PCNX1-209ENST00000554879 PRM2P04554 102 aa12.3□□□□□ -0.44
PCNX1-209ENST00000554879 DSCR8Q96T75 97 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms