RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ZNF876PQ49A33 203 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 NTM-AS1Q6ZSK4 140 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 TMEM263Q8WUH6 116 aaKnown RBP4.07□□□□□ -1.76
ATXN3-230ENST00000554673 VSIG2Q96IQ7 327 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 EDA2RQ9HAV5 297 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 DNAH1Q9P2D7 4330 aa4.07□□□□□ -1.76
ATXN3-230ENST00000554673 KIR2DL5BA0A0G2JN68 375 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 KIR2DL5BA0A0G2JPC4 375 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 TRBV6-5A0A0K0K1A5 114 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 LOC389332A0A1B0GUA5 103 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 A0A1B0GW15 77 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 TCAPO15273 167 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 MGPP08493 103 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 FABP4P15090 132 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 OR10J3Q5JRS4 329 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 SPANXN1Q5VSR9 72 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 KIR2DL5AQ8N109 375 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 OR10D4PQ8NGN7 298 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 KIR2DL5BQ8NHK3 375 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 KCNS1Q96KK3 526 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 OPRPNQ99935 248 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-230ENST00000554673 TMEM70Q9BUB7 260 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 SMIM2Q9BVW6 85 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 DPH3P1Q9H4G8 78 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 PHLDA3Q9Y5J5 127 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 CSMD3Q7Z407 3707 aa4.06□□□□□ -1.76
ATXN3-230ENST00000554673 IGLV5-52A0A0A0MRZ9 124 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 C3orf79P0CE67 100 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 PMCHP20382 165 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 RIPPLY3P57055 190 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
ATXN3-230ENST00000554673 RPL24P83731 157 aaKnown RBP4.05□□□□□ -1.76
ATXN3-230ENST00000554673 C12orf74Q32Q52 190 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 COX19Q49B96 90 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 FAM74A4Q5TZK3 123 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 FAM222AQ5U5X8 452 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 ORMDL3Q8N138 153 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 OR11H2Q8NH07 326 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 TM2D3Q9BRN9 247 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 CHCHD7Q9BUK0 85 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 STAB2Q8WWQ8 2551 aa4.05□□□□□ -1.76
ATXN3-230ENST00000554673 DNAH7Q8WXX0 4024 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 IGHV3-38A0A0C4DH36 116 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 LINC00614P0C842 121 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 S100A4P26447 101 aaKnown RBP4.04□□□□□ -1.76
ATXN3-230ENST00000554673 CKS2P33552 79 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 EMP1P54849 157 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 CMC4P56277 68 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-230ENST00000554673 SEC61GP60059 68 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 RNASEKQ6P5S7 137 aaKnown RBP4.04□□□□□ -1.76
ATXN3-230ENST00000554673 GTSCR1Q86UQ5 136 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 LINC00518Q8N0U6 118 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 Q8N8P6 123 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 SLC25A29Q8N8R3 303 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 MRAP2Q96G30 205 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 C18orf15Q96N68 181 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 AP1S3Q96PC3 154 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 ZMAT5Q9UDW3 170 aaKnown RBP4.04□□□□□ -1.76
ATXN3-230ENST00000554673 FBN3Q75N90 2809 aa4.04□□□□□ -1.76
ATXN3-230ENST00000554673 TRAV4A0A0B4J268 109 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 TRBV27A0A0K0K1C4 114 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 SDHAF1A6NFY7 115 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 IGIPA6NJ69 53 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 NUDT3O95989 172 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 RPL32P62910 135 aaKnown RBP4.03□□□□□ -1.76
ATXN3-230ENST00000554673 SRSF9Q13242 221 aaKnown RBP eCLIP4.03□□□□□ -1.76
ATXN3-230ENST00000554673 RRN3P1Q2M238 152 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 CEMP1Q6PRD7 247 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-230ENST00000554673 C16orf74Q96GX8 76 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 DNAJC30Q96LL9 226 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 PACRGQ96M98 296 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-230ENST00000554673 PMCHL2Q9BQD1 86 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 GOLT1BQ9Y3E0 138 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
ATXN3-230ENST00000554673 VPS13DQ5THJ4 4388 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 PCP4L1A6NKN8 68 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 CRYBA4P53673 196 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 UBE2D3P61077 147 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 UBE2D2P62837 147 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 JOSD1Q15040 202 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-230ENST00000554673 ZNF56Q15929 161 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 LGALS9BQ3B8N2 356 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 KRTAP21-3Q3LHN1 58 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 ZFP2Q6ZN57 461 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 BAGE3Q86Y29 109 aa4.02□□□□□ -1.77
ATXN3-230ENST00000554673 IGLV4-69A0A075B6H9 119 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 IGLV5-39A0A0G2JS06 123 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 A0A0J9YWU9 116 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 A8MWV9 139 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 PPBPP02775 128 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 DEFB130BP0DP73 79 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 DEFB130AP0DP74 79 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 NANOS2P60321 138 aaKnown RBP4.01□□□□□ -1.77
ATXN3-230ENST00000554673 ATOH7Q8N100 152 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 PRR26Q8N8Z3 221 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 CHCHD1Q96BP2 118 aaKnown RBP4.01□□□□□ -1.77
ATXN3-230ENST00000554673 TMEM208Q9BTX3 173 aa4.01□□□□□ -1.77
ATXN3-230ENST00000554673 NIT2Q9NQR4 276 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms