RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 RPL39LQ96EH5 51 aaKnown RBP7.07□□□□□ -1.28
SHMT2-213ENST00000554600 LRP1BQ9NZR2 4599 aa7.06□□□□□ -1.28
SHMT2-213ENST00000554600 HLA-DQA1P01909 254 aa7.06□□□□□ -1.28
SHMT2-213ENST00000554600 AMTP48728 403 aa7.06□□□□□ -1.28
SHMT2-213ENST00000554600 CLLU1Q5K131 121 aa7.06□□□□□ -1.28
SHMT2-213ENST00000554600 ENHOQ6UWT2 76 aa7.06□□□□□ -1.28
SHMT2-213ENST00000554600 KRTAP4-5Q9BYR2 181 aa7.06□□□□□ -1.28
SHMT2-213ENST00000554600 GFRA4Q9GZZ7 299 aa7.06□□□□□ -1.28
SHMT2-213ENST00000554600 DNAH5Q8TE73 4624 aa7.05□□□□□ -1.28
SHMT2-213ENST00000554600 FAM231BA6NCW3 169 aa7.05□□□□□ -1.28
SHMT2-213ENST00000554600 RIGQ13278 110 aa7.05□□□□□ -1.28
SHMT2-213ENST00000554600 MIAQ16674 131 aa7.05□□□□□ -1.28
SHMT2-213ENST00000554600 LINC00269Q8N2A0 174 aa7.05□□□□□ -1.28
SHMT2-213ENST00000554600 FRZBQ92765 325 aa7.05□□□□□ -1.28
SHMT2-213ENST00000554600 V9GYV3 84 aa7.05□□□□□ -1.28
SHMT2-213ENST00000554600 SDHAF1A6NFY7 115 aa7.04□□□□□ -1.28
SHMT2-213ENST00000554600 SLC7A5P1Q8MH63 180 aa7.04□□□□□ -1.28
SHMT2-213ENST00000554600 Q8N1X5 172 aa7.04□□□□□ -1.28
SHMT2-213ENST00000554600 NUP35Q8NFH5 326 aa7.04□□□□□ -1.28
SHMT2-213ENST00000554600 IGLV10-54A0A075B6I4 117 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 ATP6V1G1O75348 118 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 APCSP02743 223 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 PMCHP20382 165 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 HAMPP81172 84 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 REG3AQ06141 175 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 AMMECR1LQ6DCA0 310 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 TMEM191AQ9H0A3 160 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 NAT8BQ9UHF3 227 aa7.03□□□□□ -1.28
SHMT2-213ENST00000554600 IGKV3OR2-268A0A0C4DH90 116 aa7.02□□□□□ -1.29
SHMT2-213ENST00000554600 C14orf177Q52M58 125 aa7.02□□□□□ -1.29
SHMT2-213ENST00000554600 RNASEKQ6P5S7 137 aaKnown RBP7.02□□□□□ -1.29
SHMT2-213ENST00000554600 AMN1Q8IY45 258 aa7.02□□□□□ -1.29
SHMT2-213ENST00000554600 ST20Q9HBF5 79 aa7.02□□□□□ -1.29
SHMT2-213ENST00000554600 IGLV4-60A0A075B6I1 120 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.01□□□□□ -1.29
SHMT2-213ENST00000554600 A0A1B0GUV1 79 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 IGKV2-29A2NJV5 120 aaPredicted RBP7.01□□□□□ -1.29
SHMT2-213ENST00000554600 I3L3M4 83 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 NCR2O95944 276 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 CAMPP49913 170 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 XGP55808 180 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 LINC01620Q4KN68 170 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 UQCC3Q6UW78 93 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 C20orf203Q8NBC4 194 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 TMEM70Q9BUB7 260 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
SHMT2-213ENST00000554600 SMIM27A0A1W2PRY6 76 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 EPM2AB3EWF7 344 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 USP17L23D6RBM5 183 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 SMKR1H3BMG3 65 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 GAS8-AS1O95177 125 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
SHMT2-213ENST00000554600 RAB4AP20338 218 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 S100A1P23297 94 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 MRAP2Q96G30 205 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 RNF185Q96GF1 192 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 TMEM242Q9NWH2 141 aa7□□□□□ -1.29
SHMT2-213ENST00000554600 APOBP04114 4563 aaKnown RBP7□□□□□ -1.29
SHMT2-213ENST00000554600 TRAV8-4A0A0B4J246 113 aa6.99□□□□□ -1.29
SHMT2-213ENST00000554600 TRBV6-5A0A0K0K1A5 114 aa6.99□□□□□ -1.29
SHMT2-213ENST00000554600 PPP1R2P9O14990 202 aa6.99□□□□□ -1.29
SHMT2-213ENST00000554600 RPS10P46783 165 aaKnown RBP6.99□□□□□ -1.29
SHMT2-213ENST00000554600 PNRC1Q12796 327 aaPredicted RBP6.99□□□□□ -1.29
SHMT2-213ENST00000554600 MRPL54Q6P161 138 aaKnown RBP6.99□□□□□ -1.29
SHMT2-213ENST00000554600 LINC00862A6NCI5 91 aa6.98□□□□□ -1.29
SHMT2-213ENST00000554600 MT-ND4LP03901 98 aa6.98□□□□□ -1.29
SHMT2-213ENST00000554600 FGF6P10767 208 aa6.98□□□□□ -1.29
SHMT2-213ENST00000554600 FCER1GP30273 86 aa6.98□□□□□ -1.29
SHMT2-213ENST00000554600 TMEM101Q96IK0 257 aa6.98□□□□□ -1.29
SHMT2-213ENST00000554600 BTF3L4Q96K17 158 aa6.98□□□□□ -1.29
SHMT2-213ENST00000554600 FAM30AQ9NZY2 134 aa6.98□□□□□ -1.29
SHMT2-213ENST00000554600 A0A1B0GW15 77 aa6.97□□□□□ -1.29
SHMT2-213ENST00000554600 H7C423 109 aa6.97□□□□□ -1.29
SHMT2-213ENST00000554600 PPP1R17O96001 155 aa6.97□□□□□ -1.29
SHMT2-213ENST00000554600 TSHBP01222 138 aa6.97□□□□□ -1.29
SHMT2-213ENST00000554600 S100A8P05109 93 aa6.97□□□□□ -1.29
SHMT2-213ENST00000554600 MRPL51Q4U2R6 128 aaKnown RBP6.97□□□□□ -1.29
SHMT2-213ENST00000554600 Q5VSD8 79 aa6.97□□□□□ -1.29
SHMT2-213ENST00000554600 FAM104BQ5XKR9 115 aa6.97□□□□□ -1.29
SHMT2-213ENST00000554600 hDV102S1A0JD36 115 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 TMEM218A2RU14 115 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 VCYO14598 125 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 PRSS1P07477 247 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 CKS2P33552 79 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 POLR2KP53803 58 aaKnown RBP6.96□□□□□ -1.3
SHMT2-213ENST00000554600 HBBP68871 147 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 KRTAP26-1Q6PEX3 210 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 COMMD7Q86VX2 200 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 OR5A1Q8NGJ0 315 aa6.96□□□□□ -1.3
SHMT2-213ENST00000554600 UBR4Q5T4S7 5183 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 TRBV27A0A0K0K1C4 114 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 C7orf77A4D0Y5 90 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 GAGE12HA6NDE8 117 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 F8W036 122 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 FAM229AH3BQW9 127 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 ZNF25P17030 456 aaPredicted RBP6.95□□□□□ -1.3
SHMT2-213ENST00000554600 SUMO2P61956 95 aaKnown RBP6.95□□□□□ -1.3
SHMT2-213ENST00000554600 DGAT2L7PQ6IED9 249 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 NRACQ8N912 160 aa6.95□□□□□ -1.3
SHMT2-213ENST00000554600 ANAPC16Q96DE5 110 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms