RNA–Protein interactions for RNA: ENST00000553970.1

SEC23A-206, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-206ENST00000553970 IFNA1P01562 189 aa10.98□□□□□ -0.65
SEC23A-206ENST00000553970 AMTP48728 403 aa10.98□□□□□ -0.65
SEC23A-206ENST00000553970 RAB5CP51148 216 aa10.98□□□□□ -0.65
SEC23A-206ENST00000553970 EIF5AL1Q6IS14 154 aaKnown RBP10.98□□□□□ -0.65
SEC23A-206ENST00000553970 IGLV4-60A0A075B6I1 120 aa10.97□□□□□ -0.65
SEC23A-206ENST00000553970 A0A087WYN8 130 aa10.97□□□□□ -0.65
SEC23A-206ENST00000553970 TRAV1-1A0A0B4J248 108 aa10.97□□□□□ -0.65
SEC23A-206ENST00000553970 CCL20P78556 96 aa10.97□□□□□ -0.65
SEC23A-206ENST00000553970 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
SEC23A-206ENST00000553970 PKIGQ9Y2B9 76 aa10.97□□□□□ -0.65
SEC23A-206ENST00000553970 UBR4Q5T4S7 5183 aa10.96□□□□□ -0.65
SEC23A-206ENST00000553970 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.65
SEC23A-206ENST00000553970 SMLR1H3BR10 107 aa10.95□□□□□ -0.66
SEC23A-206ENST00000553970 PLAC8Q9NZF1 115 aa10.95□□□□□ -0.66
SEC23A-206ENST00000553970 MT1HL1P0DM35 61 aa10.94□□□□□ -0.66
SEC23A-206ENST00000553970 NTF3P20783 257 aa10.94□□□□□ -0.66
SEC23A-206ENST00000553970 RPS10P46783 165 aaKnown RBP10.94□□□□□ -0.66
SEC23A-206ENST00000553970 MEF2BQ02080 365 aaPredicted RBP10.94□□□□□ -0.66
SEC23A-206ENST00000553970 LYZL1Q6UWQ5 148 aa10.94□□□□□ -0.66
SEC23A-206ENST00000553970 C9orf62Q8N4C0 152 aa10.94□□□□□ -0.66
SEC23A-206ENST00000553970 H7C423 109 aa10.93□□□□□ -0.66
SEC23A-206ENST00000553970 NDUFS6O75380 124 aaKnown RBP10.93□□□□□ -0.66
SEC23A-206ENST00000553970 NCR2O95944 276 aa10.93□□□□□ -0.66
SEC23A-206ENST00000553970 AMMECR1LQ6DCA0 310 aa10.93□□□□□ -0.66
SEC23A-206ENST00000553970 TEX261Q6UWH6 196 aa10.93□□□□□ -0.66
SEC23A-206ENST00000553970 SMIM15Q7Z3B0 74 aa10.93□□□□□ -0.66
SEC23A-206ENST00000553970 TAGLN2P37802 199 aaKnown RBP10.92□□□□□ -0.66
SEC23A-206ENST00000553970 CTRLP40313 264 aa10.92□□□□□ -0.66
SEC23A-206ENST00000553970 GFRA4Q9GZZ7 299 aa10.92□□□□□ -0.66
SEC23A-206ENST00000553970 LINC00474Q9P2X8 69 aa10.92□□□□□ -0.66
SEC23A-206ENST00000553970 GAGE12HA6NDE8 117 aa10.91□□□□□ -0.66
SEC23A-206ENST00000553970 SLPIP03973 132 aa10.91□□□□□ -0.66
SEC23A-206ENST00000553970 CHTF8P0CG12 524 aa10.91□□□□□ -0.66
SEC23A-206ENST00000553970 TWIST1Q15672 202 aa10.91□□□□□ -0.66
SEC23A-206ENST00000553970 CNFNQ9BYD5 112 aa10.91□□□□□ -0.66
SEC23A-206ENST00000553970 MED9Q9NWA0 146 aa10.91□□□□□ -0.66
SEC23A-206ENST00000553970 RAB19A4D1S5 217 aa10.9□□□□□ -0.66
SEC23A-206ENST00000553970 PHOX2AO14813 284 aa10.9□□□□□ -0.66
SEC23A-206ENST00000553970 C15orf56Q8N910 161 aa10.9□□□□□ -0.66
SEC23A-206ENST00000553970 APCSP02743 223 aa10.89□□□□□ -0.67
SEC23A-206ENST00000553970 ZNF25P17030 456 aaPredicted RBP10.89□□□□□ -0.67
SEC23A-206ENST00000553970 COX6A2Q02221 97 aa10.89□□□□□ -0.67
SEC23A-206ENST00000553970 FAM210AQ96ND0 272 aa10.89□□□□□ -0.67
SEC23A-206ENST00000553970 GVQW2A0A096LPI5 108 aaPredicted RBP10.88□□□□□ -0.67
SEC23A-206ENST00000553970 IGKV3OR2-268A0A0C4DH90 116 aa10.88□□□□□ -0.67
SEC23A-206ENST00000553970 MAJINQ3KP22 176 aa10.88□□□□□ -0.67
SEC23A-206ENST00000553970 RNASEKQ6P5S7 137 aaKnown RBP10.88□□□□□ -0.67
SEC23A-206ENST00000553970 GTSF1Q8WW33 167 aa10.88□□□□□ -0.67
SEC23A-206ENST00000553970 CHCHD10Q8WYQ3 142 aaPredicted RBP10.88□□□□□ -0.67
SEC23A-206ENST00000553970 BCL2P10415 239 aa10.87□□□□□ -0.67
SEC23A-206ENST00000553970 GATD1Q8NB37 220 aa10.87□□□□□ -0.67
SEC23A-206ENST00000553970 NUDT10Q8NFP7 164 aa10.87□□□□□ -0.67
SEC23A-206ENST00000553970 NUDT11Q96G61 164 aa10.87□□□□□ -0.67
SEC23A-206ENST00000553970 BTF3L4Q96K17 158 aa10.87□□□□□ -0.67
SEC23A-206ENST00000553970 RPP21Q9H633 154 aaKnown RBP10.87□□□□□ -0.67
SEC23A-206ENST00000553970 TRBV20OR9-2A0A075B6H5 130 aa10.86□□□□□ -0.67
SEC23A-206ENST00000553970 IGKV2-24A0A0C4DH68 120 aa10.86□□□□□ -0.67
SEC23A-206ENST00000553970 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
SEC23A-206ENST00000553970 TMEM101Q96IK0 257 aa10.86□□□□□ -0.67
SEC23A-206ENST00000553970 PRR3P79522 188 aaKnown RBP10.85□□□□□ -0.67
SEC23A-206ENST00000553970 STPG4Q8N801 248 aa10.85□□□□□ -0.67
SEC23A-206ENST00000553970 FGF6P10767 208 aa10.84□□□□□ -0.67
SEC23A-206ENST00000553970 REG3GQ6UW15 175 aa10.84□□□□□ -0.67
SEC23A-206ENST00000553970 OR5A1Q8NGJ0 315 aa10.84□□□□□ -0.67
SEC23A-206ENST00000553970 PRSS3P2Q8NHM4 247 aa10.84□□□□□ -0.67
SEC23A-206ENST00000553970 LINC01600Q96MT4 127 aa10.84□□□□□ -0.67
SEC23A-206ENST00000553970 TRAV26-2A0A0B4J265 109 aa10.83□□□□□ -0.68
SEC23A-206ENST00000553970 SDHAF1A6NFY7 115 aa10.83□□□□□ -0.68
SEC23A-206ENST00000553970 Q6ZNX1 250 aa10.83□□□□□ -0.68
SEC23A-206ENST00000553970 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.82□□□□□ -0.68
SEC23A-206ENST00000553970 IGHV1-58A0A0C4DH39 117 aa10.82□□□□□ -0.68
SEC23A-206ENST00000553970 IGKV2-29A2NJV5 120 aaPredicted RBP10.82□□□□□ -0.68
SEC23A-206ENST00000553970 I3L3M4 83 aa10.82□□□□□ -0.68
SEC23A-206ENST00000553970 PMCHP20382 165 aa10.81□□□□□ -0.68
SEC23A-206ENST00000553970 FOXI1Q12951 378 aa10.81□□□□□ -0.68
SEC23A-206ENST00000553970 SPINK6Q6UWN8 80 aa10.81□□□□□ -0.68
SEC23A-206ENST00000553970 BORCS7Q96B45 105 aa10.81□□□□□ -0.68
SEC23A-206ENST00000553970 RPL39LQ96EH5 51 aaKnown RBP10.81□□□□□ -0.68
SEC23A-206ENST00000553970 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
SEC23A-206ENST00000553970 A8MWL6 223 aa10.8□□□□□ -0.68
SEC23A-206ENST00000553970 XCL1P47992 114 aa10.8□□□□□ -0.68
SEC23A-206ENST00000553970 SS18Q15532 418 aa10.8□□□□□ -0.68
SEC23A-206ENST00000553970 MRAP2Q96G30 205 aa10.8□□□□□ -0.68
SEC23A-206ENST00000553970 CARD19Q96LW7 228 aa10.8□□□□□ -0.68
SEC23A-206ENST00000553970 A0A096LNI7 61 aa10.79□□□□□ -0.68
SEC23A-206ENST00000553970 TRBV6-5A0A0K0K1A5 114 aa10.79□□□□□ -0.68
SEC23A-206ENST00000553970 ZNF561-AS1K7EIQ3 104 aa10.79□□□□□ -0.68
SEC23A-206ENST00000553970 SMAGPQ0VAQ4 97 aa10.79□□□□□ -0.68
SEC23A-206ENST00000553970 SLC51BQ86UW2 128 aa10.79□□□□□ -0.68
SEC23A-206ENST00000553970 LYPD6BQ8NI32 183 aa10.79□□□□□ -0.68
SEC23A-206ENST00000553970 ISOC2Q96AB3 205 aa10.79□□□□□ -0.68
SEC23A-206ENST00000553970 LINC00959A0A1B0GUT2 108 aa10.78□□□□□ -0.68
SEC23A-206ENST00000553970 Q6ZRP5 223 aa10.78□□□□□ -0.68
SEC23A-206ENST00000553970 OCC1Q8TAD7 63 aa10.78□□□□□ -0.68
SEC23A-206ENST00000553970 ST20Q9HBF5 79 aa10.78□□□□□ -0.68
SEC23A-206ENST00000553970 TNXBP22105 4242 aa10.77□□□□□ -0.68
SEC23A-206ENST00000553970 A0A0J9YXV3 536 aa10.77□□□□□ -0.69
SEC23A-206ENST00000553970 TMEM250H0YL14 139 aa10.77□□□□□ -0.69
SEC23A-206ENST00000553970 K7EN84 100 aa10.77□□□□□ -0.69
SEC23A-206ENST00000553970 CCL25O15444 150 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms