RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 REG3AQ06141 175 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 A8MUN3 132 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 COL4A3Q01955 1670 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 CACNA1BQ00975 2339 aa6.74□□□□□ -1.33
GTF2A1-203ENST00000553612 TMEM190Q8WZ59 177 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 JMJD7-PLA2G4BH0Y9G9 81 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 HOXB4P17483 251 aaPredicted RBP6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 MIR7-3HGQ8N6C7 128 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 THAP8Q8NA92 274 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 TRBV10-1A0A0K0K1A3 114 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 BPY2O14599 106 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 CRIP3Q6Q6R5 217 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 TMEM254Q8TBM7 123 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 C17orf58Q2M2W7 97 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 A0A096LPF7 62 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 PRR15Q8IV56 129 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 PAPPA2Q9BXP8 1791 aa6.73□□□□□ -1.33
GTF2A1-203ENST00000553612 BRWD1-AS2P59051 145 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 TRGV1A0A0A0MS02 117 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 LY6HO94772 140 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 SIP14410 1827 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 DNAJC9-AS1A6NH13 148 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 K7EMT4 169 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 IGF1P05019 195 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 IGFL2Q6UWQ7 119 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 H0YGX0 51 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 Q8N3U1 123 aa6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 FNDC1Q4ZHG4 1894 aaPredicted RBP6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 TNS1Q9HBL0 1735 aaKnown RBP6.72□□□□□ -1.33
GTF2A1-203ENST00000553612 PLXNB2O15031 1838 aa6.71□□□□□ -1.33
GTF2A1-203ENST00000553612 TMEM14CQ9P0S9 112 aa6.71□□□□□ -1.33
GTF2A1-203ENST00000553612 GAFA1Q96PS6 74 aa6.71□□□□□ -1.34
GTF2A1-203ENST00000553612 FP248Q71RG6 208 aaPredicted RBP6.71□□□□□ -1.34
GTF2A1-203ENST00000553612 EML5Q05BV3 1969 aa6.71□□□□□ -1.34
GTF2A1-203ENST00000553612 C6orf223Q8N319 242 aa6.71□□□□□ -1.34
GTF2A1-203ENST00000553612 ZNF491Q8N8L2 437 aa6.71□□□□□ -1.34
GTF2A1-203ENST00000553612 TRAV10A0A0B4J240 114 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 RNASE6Q93091 150 aaKnown RBP6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 IGHV4-30-2A0A087WSY4 118 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 IGLV3-1P01715 115 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 HIGD2AQ9BW72 106 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 C7orf69Q9H7B7 122 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 DPM3Q9P2X0 92 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 SPTA1P02549 2419 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 COL4A5P29400 1685 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 CUL9Q8IWT3 2517 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 COL18A1P39060 1754 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 G3V318 75 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 SRRM5B3KS81 715 aa6.7□□□□□ -1.34
GTF2A1-203ENST00000553612 A0A087WYN8 130 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 IGHV1-46P01743 117 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 LINC00308Q8TCZ7 52 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 C1orf229Q6ZS94 237 aaPredicted RBP6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 ESM1Q9NQ30 184 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 C2orf16Q68DN1 1984 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 LTBP1Q14766 1721 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 H7BZZ5 65 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 C9orf106Q8NAJ2 232 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 UBE2D4Q9Y2X8 147 aa6.69□□□□□ -1.34
GTF2A1-203ENST00000553612 MP68P56378 58 aa6.68□□□□□ -1.34
GTF2A1-203ENST00000553612 TRGV4A0A0C4DH28 118 aa6.68□□□□□ -1.34
GTF2A1-203ENST00000553612 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.68□□□□□ -1.34
GTF2A1-203ENST00000553612 PDE6HQ13956 83 aa6.68□□□□□ -1.34
GTF2A1-203ENST00000553612 ARRDC1-AS1Q9H2J1 176 aa6.68□□□□□ -1.34
GTF2A1-203ENST00000553612 Q6ZVQ6 151 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 LINC01560Q8TB33 94 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 P0C879 139 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 LY6LH3BQJ8 138 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 BSPH1Q075Z2 132 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 FAM229BQ4G0N7 80 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 GVINP1Q7Z2Y8 2422 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 CACNA1HO95180 2353 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 TM2D3Q9BRN9 247 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 TMEM131Q92545 1883 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 CNOT1A5YKK6 2376 aaKnown RBP6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 IGLV2-11P01706 119 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 COL4A6Q14031 1691 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 ADAMTS9Q9P2N4 1935 aa6.67□□□□□ -1.34
GTF2A1-203ENST00000553612 WDR87Q6ZQQ6 2873 aa6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 CASC2Q6XLA1 102 aa6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 IGKV1D-37A0A075B6S9 117 aa6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 LCA10Q71F78 164 aa6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 CEP192Q8TEP8 1941 aa6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 C8orf87E5RJ46 101 aa6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 IGLV4-69A0A075B6H9 119 aa6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 WT1P19544 449 aaPredicted RBP6.66□□□□□ -1.34
GTF2A1-203ENST00000553612 NRXN2Q9P2S2 1712 aa6.65□□□□□ -1.34
GTF2A1-203ENST00000553612 BPTFQ12830 3046 aa6.65□□□□□ -1.34
GTF2A1-203ENST00000553612 Q8N9L7 120 aa6.65□□□□□ -1.34
GTF2A1-203ENST00000553612 DNAH12Q6ZR08 3092 aa6.65□□□□□ -1.35
GTF2A1-203ENST00000553612 RETNLBQ9BQ08 111 aa6.65□□□□□ -1.35
GTF2A1-203ENST00000553612 PTPRBP23467 1997 aa6.65□□□□□ -1.35
GTF2A1-203ENST00000553612 WNK1Q9H4A3 2382 aa6.65□□□□□ -1.35
GTF2A1-203ENST00000553612 SPTAN1Q13813 2472 aaKnown RBP6.65□□□□□ -1.35
GTF2A1-203ENST00000553612 DEFB112Q30KQ8 113 aa6.64□□□□□ -1.35
GTF2A1-203ENST00000553612 OVOL3O00110 214 aa6.64□□□□□ -1.35
GTF2A1-203ENST00000553612 RHPN1-AS1Q9BWJ2 59 aa6.64□□□□□ -1.35
GTF2A1-203ENST00000553612 AVPP01185 164 aa6.64□□□□□ -1.35
GTF2A1-203ENST00000553612 C7orf65Q6ZTY9 151 aa6.64□□□□□ -1.35
GTF2A1-203ENST00000553612 IGLV10-54A0A075B6I4 117 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 317.1 ms