RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 C20orf203Q8NBC4 194 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 CCDC32Q9BV29 185 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 GFRA4Q9GZZ7 299 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 TMEM167BQ9NRX6 74 aa4.51□□□□□ -1.69
ATXN3-219ENST00000553488 TMSB15BA0A087X1C1 80 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 IGLV5-39A0A0G2JS06 123 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 TRBV6-1A0A0K0K1D8 114 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 CXorf1O96002 111 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 PET100P0DJ07 73 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 S100A1P23297 94 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 COX6A2Q02221 97 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 SRSF9Q13242 221 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATXN3-219ENST00000553488 NDUFA5Q16718 116 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 TMEM97Q5BJF2 176 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 FAM162BQ5T6X4 162 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 OR10AG1Q8NH19 301 aa4.5□□□□□ -1.69
ATXN3-219ENST00000553488 PSMG3Q9BT73 122 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-219ENST00000553488 IGLV4-60A0A075B6I1 120 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 TRBV25-1A0A075B6N4 114 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 TRAV8-4A0A0B4J246 113 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 NDUFS6O75380 124 aaKnown RBP4.49□□□□□ -1.69
ATXN3-219ENST00000553488 P01737 135 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 ATP6V0CP27449 155 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 ZNF726P1Q15940 193 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 MAJINQ3KP22 176 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 REG3GQ6UW15 175 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 INO80EQ8NBZ0 244 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-219ENST00000553488 GTSF1Q8WW33 167 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 DPH3Q96FX2 82 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 DERL1Q9BUN8 251 aa4.49□□□□□ -1.69
ATXN3-219ENST00000553488 A0A096LNI7 61 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 IGHV1-24A0A0C4DH33 117 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 IGKV2-24A0A0C4DH68 120 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 A0A1B0GUV1 79 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 FAM74A7A6NL05 159 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 VCYO14598 125 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 SNAI2O43623 268 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 LTAP01374 205 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 CXCL1P09341 107 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 GZMBP10144 247 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 UBE2G2P60604 165 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 STPG4Q8N801 248 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 HIST1H2BAQ96A08 127 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 ZFP30Q9Y2G7 519 aa4.48□□□□□ -1.69
ATXN3-219ENST00000553488 IFNA7P01567 189 aa4.47□□□□□ -1.69
ATXN3-219ENST00000553488 MBP02144 154 aa4.47□□□□□ -1.69
ATXN3-219ENST00000553488 RPS10P46783 165 aaKnown RBP4.47□□□□□ -1.69
ATXN3-219ENST00000553488 SERF2P84101 59 aa4.47□□□□□ -1.69
ATXN3-219ENST00000553488 LBHQ53QV2 105 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-219ENST00000553488 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-219ENST00000553488 LYPD6BQ8NI32 183 aa4.47□□□□□ -1.69
ATXN3-219ENST00000553488 ENKURQ8TC29 256 aa4.47□□□□□ -1.69
ATXN3-219ENST00000553488 FMC1Q96HJ9 113 aa4.47□□□□□ -1.69
ATXN3-219ENST00000553488 ACTR3CQ9C0K3 210 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-219ENST00000553488 TNFSF18Q9UNG2 199 aa4.47□□□□□ -1.69
ATXN3-219ENST00000553488 MUC17Q685J3 4493 aa4.46□□□□□ -1.69
ATXN3-219ENST00000553488 GVQW2A0A096LPI5 108 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-219ENST00000553488 CTXND1A0A1B0GTU2 59 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 INMT-MINDY4F8WBC2 141 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 OR5AL1P0C617 328 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 RAB5CP51148 216 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 IFITM3Q01628 133 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 HIGD2BQ4VC39 106 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 AQP10Q96PS8 301 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 MARVELD1Q9BSK0 173 aa4.46□□□□□ -1.7
ATXN3-219ENST00000553488 ZNF471Q9BX82 626 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-219ENST00000553488 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 M0QY20 66 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 DEFA1P59665 94 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 DEFA3P59666 94 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 UBE2G1P62253 170 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 Q6ZRP5 223 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 AKAP14Q86UN6 197 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 AP1S3Q96PC3 154 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 TMEM243Q9BU79 118 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 KRTAP2-2Q9BYT5 123 aa4.45□□□□□ -1.7
ATXN3-219ENST00000553488 NKX6-2Q9C056 277 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-219ENST00000553488 IGKV2D-30A0A075B6S6 120 aa4.44□□□□□ -1.7
ATXN3-219ENST00000553488 H7C1H1 209 aa4.44□□□□□ -1.7
ATXN3-219ENST00000553488 SSNA1O43805 119 aa4.44□□□□□ -1.7
ATXN3-219ENST00000553488 UPK1BO75841 260 aa4.44□□□□□ -1.7
ATXN3-219ENST00000553488 SPANXN1Q5VSR9 72 aa4.44□□□□□ -1.7
ATXN3-219ENST00000553488 PGLYRP4Q96LB8 373 aa4.44□□□□□ -1.7
ATXN3-219ENST00000553488 TCEAL7Q9BRU2 100 aa4.44□□□□□ -1.7
ATXN3-219ENST00000553488 AKR1C3P42330 323 aa4.43□□□□□ -1.7
ATXN3-219ENST00000553488 FHITP49789 147 aa4.43□□□□□ -1.7
ATXN3-219ENST00000553488 SULT1A2P50226 295 aa4.43□□□□□ -1.7
ATXN3-219ENST00000553488 NKX2-5P52952 324 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-219ENST00000553488 MED28Q9H204 178 aa4.43□□□□□ -1.7
ATXN3-219ENST00000553488 LINC00474Q9P2X8 69 aa4.43□□□□□ -1.7
ATXN3-219ENST00000553488 MAP1LC3B2A6NCE7 125 aa4.42□□□□□ -1.7
ATXN3-219ENST00000553488 FAM231BA6NCW3 169 aa4.42□□□□□ -1.7
ATXN3-219ENST00000553488 F8WDY8 70 aa4.42□□□□□ -1.7
ATXN3-219ENST00000553488 MGPP08493 103 aa4.42□□□□□ -1.7
ATXN3-219ENST00000553488 SMIM17P0DL12 118 aa4.42□□□□□ -1.7
ATXN3-219ENST00000553488 RPL7L1Q6DKI1 246 aaKnown RBP4.42□□□□□ -1.7
ATXN3-219ENST00000553488 CHCHD10Q8WYQ3 142 aaPredicted RBP4.42□□□□□ -1.7
ATXN3-219ENST00000553488 MAP1LC3BQ9GZQ8 125 aa4.42□□□□□ -1.7
ATXN3-219ENST00000553488 IGKV3OR2-268A0A0C4DH90 116 aa4.41□□□□□ -1.7
ATXN3-219ENST00000553488 IGLC6P0CF74 106 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms