RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ZNF137PP52743 207 aa1.74□□□□□ -2.13
SCFD1-208ENST00000553278 TSLPQ969D9 159 aa1.74□□□□□ -2.13
SCFD1-208ENST00000553278 MGST2Q99735 147 aa1.74□□□□□ -2.13
SCFD1-208ENST00000553278 BPESC1Q9GZL8 116 aa1.74□□□□□ -2.13
SCFD1-208ENST00000553278 R4GMQ9 66 aa1.74□□□□□ -2.13
SCFD1-208ENST00000553278 SCAPERQ9BY12 1400 aa1.74□□□□□ -2.13
SCFD1-208ENST00000553278 SIPA1L3O60292 1781 aaPredicted RBP1.73□□□□□ -2.13
SCFD1-208ENST00000553278 ARHGAP5Q13017 1502 aa1.73□□□□□ -2.13
SCFD1-208ENST00000553278 TRGV1A0A0A0MS02 117 aa1.73□□□□□ -2.13
SCFD1-208ENST00000553278 S100A10P60903 97 aa1.73□□□□□ -2.13
SCFD1-208ENST00000553278 GNG11P61952 73 aa1.73□□□□□ -2.13
SCFD1-208ENST00000553278 C6orf52Q5T4I8 152 aa1.73□□□□□ -2.13
SCFD1-208ENST00000553278 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.73□□□□□ -2.13
SCFD1-208ENST00000553278 BAGE3Q86Y29 109 aa1.73□□□□□ -2.13
SCFD1-208ENST00000553278 LOC285556D6RIA3 1793 aa1.72□□□□□ -2.13
SCFD1-208ENST00000553278 SNCAP37840 140 aa1.72□□□□□ -2.13
SCFD1-208ENST00000553278 SPAG11BQ08648 103 aa1.72□□□□□ -2.13
SCFD1-208ENST00000553278 SPAG11AQ6PDA7 123 aa1.72□□□□□ -2.13
SCFD1-208ENST00000553278 SMIM11BQ8TCY0 68 aa1.72□□□□□ -2.13
SCFD1-208ENST00000553278 F5P12259 2224 aa1.72□□□□□ -2.13
SCFD1-208ENST00000553278 SHROOM2Q13796 1616 aa1.71□□□□□ -2.14
SCFD1-208ENST00000553278 M0R143 59 aa1.71□□□□□ -2.14
SCFD1-208ENST00000553278 CCL18P55774 89 aa1.71□□□□□ -2.14
SCFD1-208ENST00000553278 DYNLRB1Q9NP97 96 aa1.71□□□□□ -2.14
SCFD1-208ENST00000553278 TCHHQ07283 1943 aa1.71□□□□□ -2.14
SCFD1-208ENST00000553278 PRDM2Q13029 1718 aa1.71□□□□□ -2.14
SCFD1-208ENST00000553278 NAP1L6A6NFF2 107 aa1.7□□□□□ -2.14
SCFD1-208ENST00000553278 VMO1Q7Z5L0 202 aa1.7□□□□□ -2.14
SCFD1-208ENST00000553278 TANC1Q9C0D5 1861 aa1.7□□□□□ -2.14
SCFD1-208ENST00000553278 NDUFA4L2Q9NRX3 87 aa1.7□□□□□ -2.14
SCFD1-208ENST00000553278 CDK13Q14004 1512 aaKnown RBP1.7□□□□□ -2.14
SCFD1-208ENST00000553278 TRAV1-2A0A0B4J238 106 aa1.69□□□□□ -2.14
SCFD1-208ENST00000553278 TMEM14DPA8MWL7 114 aa1.69□□□□□ -2.14
SCFD1-208ENST00000553278 V9GYH0 126 aa1.69□□□□□ -2.14
SCFD1-208ENST00000553278 CC2D2AQ9P2K1 1620 aa1.69□□□□□ -2.14
SCFD1-208ENST00000553278 MRC1P22897 1456 aa1.69□□□□□ -2.14
SCFD1-208ENST00000553278 ASH1LQ9NR48 2969 aaKnown RBP1.68□□□□□ -2.14
SCFD1-208ENST00000553278 DOCK11Q5JSL3 2073 aa1.68□□□□□ -2.14
SCFD1-208ENST00000553278 GVQW2A0A096LPI5 108 aaPredicted RBP1.68□□□□□ -2.14
SCFD1-208ENST00000553278 NCMAPQ5T1S8 102 aa1.68□□□□□ -2.14
SCFD1-208ENST00000553278 LOC285095A0A1B0GVY8 99 aa1.67□□□□□ -2.14
SCFD1-208ENST00000553278 KRTDAPP60985 99 aa1.67□□□□□ -2.14
SCFD1-208ENST00000553278 PRR15LQ9BU68 103 aa1.67□□□□□ -2.14
SCFD1-208ENST00000553278 UQCR10Q9UDW1 63 aa1.67□□□□□ -2.14
SCFD1-208ENST00000553278 PSME4Q14997 1843 aa1.66□□□□□ -2.14
SCFD1-208ENST00000553278 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SCFD1-208ENST00000553278 Q5VV11 94 aa1.66□□□□□ -2.14
SCFD1-208ENST00000553278 AP4S1Q9Y587 144 aa1.66□□□□□ -2.14
SCFD1-208ENST00000553278 CHKB-CPT1BH3BT56 60 aa1.65□□□□□ -2.15
SCFD1-208ENST00000553278 M0R135 149 aa1.65□□□□□ -2.15
SCFD1-208ENST00000553278 FAM213BQ8TBF2 198 aa1.65□□□□□ -2.15
SCFD1-208ENST00000553278 CTXND1A0A1B0GTU2 59 aa1.64□□□□□ -2.15
SCFD1-208ENST00000553278 HMGN4O00479 90 aa1.64□□□□□ -2.15
SCFD1-208ENST00000553278 PKIAP61925 76 aa1.64□□□□□ -2.15
SCFD1-208ENST00000553278 Q6ZRX8 168 aa1.64□□□□□ -2.15
SCFD1-208ENST00000553278 FAM167A-AS1Q96KT0 104 aa1.64□□□□□ -2.15
SCFD1-208ENST00000553278 IFT172Q9UG01 1749 aa1.63□□□□□ -2.15
SCFD1-208ENST00000553278 ZMYM4Q5VZL5 1548 aa1.63□□□□□ -2.15
SCFD1-208ENST00000553278 GCHFRP30047 84 aa1.63□□□□□ -2.15
SCFD1-208ENST00000553278 Q0VG73 95 aa1.63□□□□□ -2.15
SCFD1-208ENST00000553278 MANBALQ9NQG1 85 aa1.63□□□□□ -2.15
SCFD1-208ENST00000553278 TET3O43151 1660 aa1.63□□□□□ -2.15
SCFD1-208ENST00000553278 ABCA3Q99758 1704 aa1.63□□□□□ -2.15
SCFD1-208ENST00000553278 A0A0D9SG42 100 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 CRYM-AS1A6NIL9 109 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 MPC2O95563 127 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 LINC00032P0C843 101 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 COL5A1-AS1Q5SY13 56 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 TMEM170BQ5T4T1 132 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 SMARCA2P51531 1590 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 ABCC10Q5T3U5 1492 aa1.62□□□□□ -2.15
SCFD1-208ENST00000553278 ABCC5O15440 1437 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 F8VRH5 84 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 CFAP126Q5VTH2 177 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 SMIM4Q8WVI0 70 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 DPY30Q9C005 99 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 GOLGA3Q08378 1498 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 TOPAZ1Q8N9V7 1692 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 NAV3Q8IVL0 2385 aa1.61□□□□□ -2.15
SCFD1-208ENST00000553278 SSC5DA1L4H1 1573 aa1.6□□□□□ -2.15
SCFD1-208ENST00000553278 hADV29S1A0JD25 119 aa1.6□□□□□ -2.15
SCFD1-208ENST00000553278 GNGT2O14610 69 aa1.6□□□□□ -2.15
SCFD1-208ENST00000553278 COX6CP09669 75 aa1.6□□□□□ -2.15
SCFD1-208ENST00000553278 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
SCFD1-208ENST00000553278 JMJD1CQ15652 2540 aa1.6□□□□□ -2.15
SCFD1-208ENST00000553278 TEX14Q8IWB6 1497 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 TRAV22A0A0B4J277 110 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 IGLC7A0M8Q6 106 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 UQCR11O14957 56 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 UBE2D3P61077 147 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 UBE2D2P62837 147 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 SEC11AP67812 179 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 BAGE2Q86Y30 109 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 AMELXQ99217 191 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 CDC42SE2Q9NRR3 84 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 PRO1854Q9UHT4 67 aa1.59□□□□□ -2.15
SCFD1-208ENST00000553278 ZNF609O15014 1411 aa1.58□□□□□ -2.16
SCFD1-208ENST00000553278 FYCO1Q9BQS8 1478 aa1.58□□□□□ -2.16
SCFD1-208ENST00000553278 APOC3P02656 99 aa1.58□□□□□ -2.16
SCFD1-208ENST00000553278 MT-ATP8P03928 68 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 558.4 ms