RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 NIT1Q86X76 327 aa11.72□□□□□ -0.53
CADM1-220ENST00000546000 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
CADM1-220ENST00000546000 GTSF1LQ9H1H1 148 aa11.72□□□□□ -0.53
CADM1-220ENST00000546000 NXT2Q9NPJ8 142 aaKnown RBP11.72□□□□□ -0.53
CADM1-220ENST00000546000 TMA7Q9Y2S6 64 aaKnown RBP11.72□□□□□ -0.53
CADM1-220ENST00000546000 NUPR1O60356 82 aa11.71□□□□□ -0.53
CADM1-220ENST00000546000 FCER1GP30273 86 aa11.71□□□□□ -0.53
CADM1-220ENST00000546000 RAB5BP61020 215 aa11.71□□□□□ -0.53
CADM1-220ENST00000546000 PMCHL1Q16048 86 aa11.71□□□□□ -0.53
CADM1-220ENST00000546000 CHCHD7Q9BUK0 85 aa11.71□□□□□ -0.53
CADM1-220ENST00000546000 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.7□□□□□ -0.54
CADM1-220ENST00000546000 IGKV2-29A2NJV5 120 aaPredicted RBP11.7□□□□□ -0.54
CADM1-220ENST00000546000 AMTP48728 403 aa11.7□□□□□ -0.54
CADM1-220ENST00000546000 NDUFA6P56556 154 aa11.7□□□□□ -0.54
CADM1-220ENST00000546000 KIR2DL4Q99706 377 aa11.7□□□□□ -0.54
CADM1-220ENST00000546000 RYR3Q15413 4870 aa11.69□□□□□ -0.54
CADM1-220ENST00000546000 TRBV6-8A0A0A6YYG3 113 aa11.69□□□□□ -0.54
CADM1-220ENST00000546000 CASC10Q5T4H9 136 aa11.69□□□□□ -0.54
CADM1-220ENST00000546000 SH2D6Q7Z4S9 175 aa11.69□□□□□ -0.54
CADM1-220ENST00000546000 Q8N3U1 123 aa11.69□□□□□ -0.54
CADM1-220ENST00000546000 LYSTQ99698 3801 aa11.69□□□□□ -0.54
CADM1-220ENST00000546000 LINC00588Q9Y4M8 146 aa11.69□□□□□ -0.54
CADM1-220ENST00000546000 IGHV1-24A0A0C4DH33 117 aa11.68□□□□□ -0.54
CADM1-220ENST00000546000 LINC00614P0C842 121 aa11.68□□□□□ -0.54
CADM1-220ENST00000546000 RPL39P62891 51 aaKnown RBP11.68□□□□□ -0.54
CADM1-220ENST00000546000 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
CADM1-220ENST00000546000 ALMS1Q8TCU4 4167 aa11.68□□□□□ -0.54
CADM1-220ENST00000546000 VPS13DQ5THJ4 4388 aa11.68□□□□□ -0.54
CADM1-220ENST00000546000 LINC01546A6NGU7 62 aa11.67□□□□□ -0.54
CADM1-220ENST00000546000 GAGE6Q13070 117 aa11.67□□□□□ -0.54
CADM1-220ENST00000546000 LAGE3Q14657 143 aa11.67□□□□□ -0.54
CADM1-220ENST00000546000 LELP1Q5T871 98 aa11.67□□□□□ -0.54
CADM1-220ENST00000546000 TMEM243Q9BU79 118 aa11.67□□□□□ -0.54
CADM1-220ENST00000546000 AP5S1Q9NUS5 200 aa11.67□□□□□ -0.54
CADM1-220ENST00000546000 TRBV25-1A0A075B6N4 114 aa11.66□□□□□ -0.54
CADM1-220ENST00000546000 A0A096LNJ9 63 aa11.66□□□□□ -0.54
CADM1-220ENST00000546000 ESDP10768 282 aa11.66□□□□□ -0.54
CADM1-220ENST00000546000 FAM19A2Q8N3H0 131 aa11.66□□□□□ -0.54
CADM1-220ENST00000546000 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
CADM1-220ENST00000546000 TENM2Q9NT68 2774 aa11.65□□□□□ -0.54
CADM1-220ENST00000546000 DNAH1Q9P2D7 4330 aa11.65□□□□□ -0.54
CADM1-220ENST00000546000 C3orf84H3BNL1 204 aa11.65□□□□□ -0.54
CADM1-220ENST00000546000 BTF3P20290 206 aaKnown RBP11.65□□□□□ -0.54
CADM1-220ENST00000546000 TIRAPP58753 221 aa11.65□□□□□ -0.54
CADM1-220ENST00000546000 PDZD11Q5EBL8 140 aa11.64□□□□□ -0.55
CADM1-220ENST00000546000 C20orf203Q8NBC4 194 aa11.64□□□□□ -0.55
CADM1-220ENST00000546000 CHCHD1Q96BP2 118 aaKnown RBP11.64□□□□□ -0.55
CADM1-220ENST00000546000 MRPS16Q9Y3D3 137 aaKnown RBP11.64□□□□□ -0.55
CADM1-220ENST00000546000 HSBP1O75506 76 aa11.63□□□□□ -0.55
CADM1-220ENST00000546000 CCL18P55774 89 aa11.63□□□□□ -0.55
CADM1-220ENST00000546000 ORMDL2Q53FV1 153 aa11.63□□□□□ -0.55
CADM1-220ENST00000546000 TMEM97Q5BJF2 176 aa11.63□□□□□ -0.55
CADM1-220ENST00000546000 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
CADM1-220ENST00000546000 UBE2DNLQ8IWF7 75 aa11.63□□□□□ -0.55
CADM1-220ENST00000546000 TCTAP57738 103 aa11.62□□□□□ -0.55
CADM1-220ENST00000546000 MPV17L2Q567V2 206 aa11.62□□□□□ -0.55
CADM1-220ENST00000546000 C2orf66Q6UXQ4 117 aa11.62□□□□□ -0.55
CADM1-220ENST00000546000 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 K7EMI3 77 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 UBE2L6O14933 153 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 IGHV3-30P01768 117 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 IGHV3-33P01772 117 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 HBDP02042 147 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 IGHV3-30-3P0DP02 117 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 IGHV3-30-5P0DP03 117 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 FGF6P10767 208 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 LINC00173Q6ZV60 143 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 Q8N976 141 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 OPRPNQ99935 248 aaPredicted RBP11.6□□□□□ -0.55
CADM1-220ENST00000546000 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 UBE2D4Q9Y2X8 147 aa11.6□□□□□ -0.55
CADM1-220ENST00000546000 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
CADM1-220ENST00000546000 TMEM262E9PQX1 116 aa11.59□□□□□ -0.55
CADM1-220ENST00000546000 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
CADM1-220ENST00000546000 Q6ZUT4 128 aa11.59□□□□□ -0.55
CADM1-220ENST00000546000 TOMM6Q96B49 74 aa11.59□□□□□ -0.55
CADM1-220ENST00000546000 S100A6P06703 90 aa11.58□□□□□ -0.56
CADM1-220ENST00000546000 SNRPEP62304 92 aaKnown RBP11.58□□□□□ -0.56
CADM1-220ENST00000546000 RBX1P62877 108 aa11.58□□□□□ -0.56
CADM1-220ENST00000546000 ZC2HC1BQ5TFG8 222 aa11.58□□□□□ -0.56
CADM1-220ENST00000546000 FAM104AQ969W3 186 aa11.58□□□□□ -0.56
CADM1-220ENST00000546000 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
CADM1-220ENST00000546000 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
CADM1-220ENST00000546000 HIST3H2BBQ8N257 126 aa11.57□□□□□ -0.56
CADM1-220ENST00000546000 FABP4P15090 132 aa11.56□□□□□ -0.56
CADM1-220ENST00000546000 CLPSL2Q6UWE3 100 aa11.56□□□□□ -0.56
CADM1-220ENST00000546000 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
CADM1-220ENST00000546000 IGIPA6NJ69 53 aa11.55□□□□□ -0.56
CADM1-220ENST00000546000 IFITM10A6NMD0 228 aa11.55□□□□□ -0.56
CADM1-220ENST00000546000 SIVA1O15304 175 aa11.55□□□□□ -0.56
CADM1-220ENST00000546000 MRPL52Q86TS9 123 aaKnown RBP11.55□□□□□ -0.56
CADM1-220ENST00000546000 LINC00476Q8WZB0 136 aa11.55□□□□□ -0.56
CADM1-220ENST00000546000 SCGB3A1Q96QR1 104 aa11.55□□□□□ -0.56
CADM1-220ENST00000546000 DNAH6Q9C0G6 4158 aa11.54□□□□□ -0.56
CADM1-220ENST00000546000 A0A087WX48 190 aa11.54□□□□□ -0.56
CADM1-220ENST00000546000 C5orf52A6NGY3 159 aa11.54□□□□□ -0.56
CADM1-220ENST00000546000 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
CADM1-220ENST00000546000 SPANXA1Q9NS26 97 aa11.54□□□□□ -0.56
CADM1-220ENST00000546000 H7C423 109 aa11.53□□□□□ -0.56
CADM1-220ENST00000546000 LY6G6CO95867 125 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms