RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	IQCJ	Q1A5X6	159 aa		7.36	□□□□□ -1.23
DDB1-222	ENST00000543627	LINC00269	Q8N2A0	174 aa		7.36	□□□□□ -1.23
DDB1-222	ENST00000543627	C1orf43	Q9BWL3	253 aa		7.36	□□□□□ -1.23
DDB1-222	ENST00000543627	ST20	Q9HBF5	79 aa		7.36	□□□□□ -1.23
DDB1-222	ENST00000543627	DYNC1H1	Q14204	4646 aa	Known RBP	7.36	□□□□□ -1.23
DDB1-222	ENST00000543627	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	IGKV2-29	A2NJV5	120 aa	Predicted RBP	7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	LRCOL1	A6NCL2	159 aa		7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	HLA-DQA1	P01909	254 aa		7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	APCS	P02743	223 aa		7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	AMMECR1L	Q6DCA0	310 aa		7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	RNASEK	Q6P5S7	137 aa	Known RBP	7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	ENHO	Q6UWT2	76 aa		7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	RNF185	Q96GF1	192 aa		7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	COX11	Q9Y6N1	276 aa		7.35	□□□□□ -1.23
DDB1-222	ENST00000543627	IGLV10-54	A0A075B6I4	117 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627		F8W036	122 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627		I3L3M4	83 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	PPP1R2P9	O14990	202 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	MT-ND4L	P03901	98 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	RPS10	P46783	165 aa	Known RBP	7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	WFDC2	Q14508	124 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627		Q8N814	137 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	MAPKAPK5-AS1	Q8N8E1	139 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	FRZB	Q92765	325 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	MRAP2	Q96G30	205 aa		7.34	□□□□□ -1.23
DDB1-222	ENST00000543627	IGLV4-60	A0A075B6I1	120 aa		7.33	□□□□□ -1.24
DDB1-222	ENST00000543627	GCSH	P23434	173 aa		7.33	□□□□□ -1.24
DDB1-222	ENST00000543627	CKS2	P33552	79 aa		7.33	□□□□□ -1.24
DDB1-222	ENST00000543627	MRPL51	Q4U2R6	128 aa	Known RBP	7.33	□□□□□ -1.24
DDB1-222	ENST00000543627	TMEM242	Q9NWH2	141 aa		7.33	□□□□□ -1.24
DDB1-222	ENST00000543627	S100A8	P05109	93 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	FCER1G	P30273	86 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	HBB	P68871	147 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	REG3A	Q06141	175 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	PNRC1	Q12796	327 aa	Predicted RBP	7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	FAM104B	Q5XKR9	115 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	CDPF1	Q6NVV7	123 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	COMMD7	Q86VX2	200 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627	C20orf203	Q8NBC4	194 aa		7.32	□□□□□ -1.24
DDB1-222	ENST00000543627		A0A1B0GW15	77 aa		7.31	□□□□□ -1.24
DDB1-222	ENST00000543627	KRTAP10-1	P60331	282 aa		7.31	□□□□□ -1.24
DDB1-222	ENST00000543627	MIA	Q16674	131 aa		7.31	□□□□□ -1.24
DDB1-222	ENST00000543627	ANAPC16	Q96DE5	110 aa		7.31	□□□□□ -1.24
DDB1-222	ENST00000543627	BTF3L4	Q96K17	158 aa		7.31	□□□□□ -1.24
DDB1-222	ENST00000543627	TMEM70	Q9BUB7	260 aa		7.31	□□□□□ -1.24
DDB1-222	ENST00000543627	KIAA1109	Q2LD37	5005 aa		7.31	□□□□□ -1.24
DDB1-222	ENST00000543627	TRBV6-5	A0A0K0K1A5	114 aa		7.3	□□□□□ -1.24
DDB1-222	ENST00000543627	TMEM218	A2RU14	115 aa		7.3	□□□□□ -1.24
DDB1-222	ENST00000543627	VCY	O14598	125 aa		7.3	□□□□□ -1.24
DDB1-222	ENST00000543627	PPP1R17	O96001	155 aa		7.3	□□□□□ -1.24
DDB1-222	ENST00000543627	UQCC3	Q6UW78	93 aa		7.3	□□□□□ -1.24
DDB1-222	ENST00000543627	TMEM101	Q96IK0	257 aa		7.3	□□□□□ -1.24
DDB1-222	ENST00000543627		A0A1B0GUV1	79 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627		D6R8Y8	96 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	TSHB	P01222	138 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	FGF6	P10767	208 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	POLR2K	P53803	58 aa	Known RBP	7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	SUMO2	P61956	95 aa	Known RBP	7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	HAMP	P81172	84 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	LINC01620	Q4KN68	170 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	NTN5	Q8WTR8	489 aa	Predicted RBP	7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	PCLO	Q9Y6V0	5065 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	LRP1B	Q9NZR2	4599 aa		7.29	□□□□□ -1.24
DDB1-222	ENST00000543627	USP17L23	D6RBM5	183 aa		7.28	□□□□□ -1.24
DDB1-222	ENST00000543627	ADCYAP1	P18509	176 aa		7.28	□□□□□ -1.24
DDB1-222	ENST00000543627	DGAT2L7P	Q6IED9	249 aa		7.28	□□□□□ -1.24
DDB1-222	ENST00000543627	NRAC	Q8N912	160 aa		7.28	□□□□□ -1.24
DDB1-222	ENST00000543627	KIR2DL4	Q99706	377 aa		7.28	□□□□□ -1.24
DDB1-222	ENST00000543627	PRR34	Q9NV39	138 aa		7.28	□□□□□ -1.24
DDB1-222	ENST00000543627	DNAH5	Q8TE73	4624 aa		7.28	□□□□□ -1.24
DDB1-222	ENST00000543627	LOC389332	A0A1B0GUA5	103 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627		A0A1B0GXF2	115 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627	C7orf77	A4D0Y5	90 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627	LINC00862	A6NCI5	91 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627	CDK2AP2	O75956	126 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627	TNFRSF6B	O95407	300 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627	TMEM136	Q6ZRR5	245 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627	OR5A1	Q8NGJ0	315 aa		7.27	□□□□□ -1.25
DDB1-222	ENST00000543627	TRAV8-4	A0A0B4J246	113 aa		7.26	□□□□□ -1.25
DDB1-222	ENST00000543627	TRBV27	A0A0K0K1C4	114 aa		7.26	□□□□□ -1.25
DDB1-222	ENST00000543627	GAGE12H	A6NDE8	117 aa		7.26	□□□□□ -1.25
DDB1-222	ENST00000543627		H7C423	109 aa		7.26	□□□□□ -1.25
DDB1-222	ENST00000543627	NPY	P01303	97 aa		7.26	□□□□□ -1.25
DDB1-222	ENST00000543627	C14orf177	Q52M58	125 aa		7.26	□□□□□ -1.25
DDB1-222	ENST00000543627	ATP5L2	Q7Z4Y8	100 aa		7.26	□□□□□ -1.25
DDB1-222	ENST00000543627	HERC2	O95714	4834 aa		7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	TCAP	O15273	167 aa		7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	SMR3B	P02814	79 aa	Predicted RBP	7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	ESD	P10768	282 aa		7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	RNASE13	Q5GAN3	156 aa	Known RBP	7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	ORMDL3	Q8N138	153 aa		7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	PRELID3A	Q96N28	172 aa		7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	C20orf78	Q9BR46	151 aa		7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	SEC11C	Q9BY50	192 aa		7.25	□□□□□ -1.25
DDB1-222	ENST00000543627	hDV102S1	A0JD36	115 aa		7.24	□□□□□ -1.25
DDB1-222	ENST00000543627	PPBP	P02775	128 aa		7.24	□□□□□ -1.25
DDB1-222	ENST00000543627	ZNF25	P17030	456 aa	Predicted RBP	7.24	□□□□□ -1.25
DDB1-222	ENST00000543627	RAB5A	P20339	215 aa		7.24	□□□□□ -1.25
DDB1-222	ENST00000543627	XCL1	P47992	114 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms