RNA–Protein interactions for RNA: ENST00000543555.5

MSH2-206, Transcript of mutS homolog 2, humanhuman

TSL 2 BASIC

Gene MSH2, Length 3,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-206ENST00000543555 SPXQ9BT56 116 aa10.11□□□□□ -0.79
MSH2-206ENST00000543555 NOTCH3Q9UM47 2321 aa10.11□□□□□ -0.79
MSH2-206ENST00000543555 K7EP34 96 aa10.11□□□□□ -0.79
MSH2-206ENST00000543555 XCL2Q9UBD3 114 aa10.11□□□□□ -0.79
MSH2-206ENST00000543555 VWFP04275 2813 aa10.1□□□□□ -0.79
MSH2-206ENST00000543555 SCGB2A2Q13296 93 aa10.1□□□□□ -0.79
MSH2-206ENST00000543555 BEAN1Q3B7T3 259 aa10.1□□□□□ -0.79
MSH2-206ENST00000543555 TMEM170BQ5T4T1 132 aa10.1□□□□□ -0.79
MSH2-206ENST00000543555 Q6ZSN1 163 aa10.1□□□□□ -0.79
MSH2-206ENST00000543555 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
MSH2-206ENST00000543555 TNFRSF18Q9Y5U5 241 aa10.1□□□□□ -0.79
MSH2-206ENST00000543555 RHODO00212 210 aa10.09□□□□□ -0.79
MSH2-206ENST00000543555 NFE4Q86UQ8 179 aa10.09□□□□□ -0.79
MSH2-206ENST00000543555 SAMD5Q5TGI4 173 aa10.09□□□□□ -0.79
MSH2-206ENST00000543555 RNASE8Q8TDE3 154 aaKnown RBP10.09□□□□□ -0.79
MSH2-206ENST00000543555 TRRAPQ9Y4A5 3859 aa10.09□□□□□ -0.79
MSH2-206ENST00000543555 IGLV4-3A0A075B6K6 122 aa10.09□□□□□ -0.79
MSH2-206ENST00000543555 GAGE12BA1L429 117 aa10.09□□□□□ -0.79
MSH2-206ENST00000543555 SCGB1D4Q6XE38 83 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 C1orf158Q8N1D5 194 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 PLEKHB2Q96CS7 222 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 Q9UF83 564 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 FABP2P12104 132 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 AZU1P20160 251 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 ZNF418Q8TF45 676 aaPredicted RBP10.08□□□□□ -0.8
MSH2-206ENST00000543555 SPCS1Q9Y6A9 102 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 STAB1Q9NY15 2570 aa10.08□□□□□ -0.8
MSH2-206ENST00000543555 RS1O15537 224 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 C12orf74Q32Q52 190 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 PYGO1Q9Y3Y4 419 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 COL6A5A8TX70 2615 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 IGHV3-53P01767 116 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 FOSL1P15407 271 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 VCX2Q9H322 139 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 TSPEAR-AS2P59090 65 aa10.07□□□□□ -0.8
MSH2-206ENST00000543555 NACAE9PAV3 2078 aa10.06□□□□□ -0.8
MSH2-206ENST00000543555 IGHV3OR16-12A0A075B7B8 117 aa10.06□□□□□ -0.8
MSH2-206ENST00000543555 HILS1P60008 231 aa10.06□□□□□ -0.8
MSH2-206ENST00000543555 SAP30O75446 220 aa10.05□□□□□ -0.8
MSH2-206ENST00000543555 OR5A1Q8NGJ0 315 aa10.05□□□□□ -0.8
MSH2-206ENST00000543555 IL17DQ8TAD2 202 aa10.05□□□□□ -0.8
MSH2-206ENST00000543555 DNAJC30Q96LL9 226 aa10.05□□□□□ -0.8
MSH2-206ENST00000543555 A0A1B0GWB2 263 aa10.05□□□□□ -0.8
MSH2-206ENST00000543555 TMEM223A0PJW6 202 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 IGLL5B9A064 214 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
MSH2-206ENST00000543555 FAM104AQ969W3 186 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 A0A0J9YY99 117 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 J3QQQ9 107 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 CRLF1O75462 422 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 AMELXQ99217 191 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 CHCHD7Q9BUK0 85 aa10.04□□□□□ -0.8
MSH2-206ENST00000543555 CMC4P56277 68 aaPredicted RBP10.04□□□□□ -0.8
MSH2-206ENST00000543555 ADARB2-AS1A8MUL3 147 aa10.03□□□□□ -0.8
MSH2-206ENST00000543555 CRYBA4P53673 196 aa10.03□□□□□ -0.8
MSH2-206ENST00000543555 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
MSH2-206ENST00000543555 IGLV1-51P01701 117 aa10.03□□□□□ -0.8
MSH2-206ENST00000543555 CEMP1Q6PRD7 247 aaPredicted RBP10.03□□□□□ -0.8
MSH2-206ENST00000543555 NDUFA7O95182 113 aa10.02□□□□□ -0.8
MSH2-206ENST00000543555 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.8
MSH2-206ENST00000543555 ZNF479Q96JC4 524 aa10.02□□□□□ -0.8
MSH2-206ENST00000543555 TRGV1A0A0A0MS02 117 aa10.02□□□□□ -0.81
MSH2-206ENST00000543555 LEPROTO15243 131 aa10.02□□□□□ -0.81
MSH2-206ENST00000543555 OCIAD2Q56VL3 154 aa10.02□□□□□ -0.81
MSH2-206ENST00000543555 IGHV3-38A0A0C4DH36 116 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 TMEM238LA0A1B0GVL6 79 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 A6NJY4 79 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 RBX1P62877 108 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 TMEM263Q8WUH6 116 aaKnown RBP10.01□□□□□ -0.81
MSH2-206ENST00000543555 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 UBE2D4Q9Y2X8 147 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 SPANXB1Q9NS25 103 aaPredicted RBP10.01□□□□□ -0.81
MSH2-206ENST00000543555 MRPS36P82909 103 aaKnown RBP10.01□□□□□ -0.81
MSH2-206ENST00000543555 COTL1Q14019 142 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 RRN3P1Q2M238 152 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 FAM110AQ9BQ89 295 aa10.01□□□□□ -0.81
MSH2-206ENST00000543555 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10□□□□□ -0.81
MSH2-206ENST00000543555 IGKV2-29A2NJV5 120 aaPredicted RBP10□□□□□ -0.81
MSH2-206ENST00000543555 GIG44P09565 113 aaPredicted RBP10□□□□□ -0.81
MSH2-206ENST00000543555 SLC25A29Q8N8R3 303 aa10□□□□□ -0.81
MSH2-206ENST00000543555 WFDC10AQ9H1F0 79 aa10□□□□□ -0.81
MSH2-206ENST00000543555 C19orf73Q9NVV2 129 aa10□□□□□ -0.81
MSH2-206ENST00000543555 UBE2D1P51668 147 aa9.99□□□□□ -0.81
MSH2-206ENST00000543555 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
MSH2-206ENST00000543555 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
MSH2-206ENST00000543555 Q6ZTI0 123 aa9.99□□□□□ -0.81
MSH2-206ENST00000543555 CBY1Q9Y3M2 126 aa9.99□□□□□ -0.81
MSH2-206ENST00000543555 IGHV3-30P01768 117 aa9.98□□□□□ -0.81
MSH2-206ENST00000543555 IGHV3-30-5P0DP03 117 aa9.98□□□□□ -0.81
MSH2-206ENST00000543555 Q6ZUT4 128 aa9.98□□□□□ -0.81
MSH2-206ENST00000543555 TRAV4A0A0B4J268 109 aa9.97□□□□□ -0.81
MSH2-206ENST00000543555 RPL35AP18077 110 aaKnown RBP9.97□□□□□ -0.81
MSH2-206ENST00000543555 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.97□□□□□ -0.81
MSH2-206ENST00000543555 DAZ2Q13117 558 aaKnown RBP9.96□□□□□ -0.81
MSH2-206ENST00000543555 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.81
MSH2-206ENST00000543555 NOP10Q9NPE3 64 aaKnown RBP9.96□□□□□ -0.81
MSH2-206ENST00000543555 PGPEP1Q9NXJ5 209 aa9.96□□□□□ -0.81
MSH2-206ENST00000543555 TRBV10-1A0A0K0K1A3 114 aa9.96□□□□□ -0.82
MSH2-206ENST00000543555 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms