RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 IGHV3-73A0A0B4J1V6 119 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 RBMY1BA6NDE4 496 aaKnown RBP9.86□□□□□ -0.83
PPME1-208ENST00000543525 RBMY1EA6NEQ0 496 aaKnown RBP9.86□□□□□ -0.83
PPME1-208ENST00000543525 RBMY1DP0C7P1 496 aaKnown RBP9.86□□□□□ -0.83
PPME1-208ENST00000543525 TMEM61Q8N0U2 210 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 RAX2Q96IS3 184 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 LINC00467Q9BRT7 94 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 CCDC168Q8NDH2 2452 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 LOC107984156A0A0G2JMH3 177 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 A0A0J9YXV3 536 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 CD28P10747 220 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 ARL17AQ8IVW1 177 aa9.86□□□□□ -0.83
PPME1-208ENST00000543525 PSMB2P49721 201 aa9.85□□□□□ -0.83
PPME1-208ENST00000543525 ETDBQ3ZM63 59 aa9.85□□□□□ -0.83
PPME1-208ENST00000543525 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
PPME1-208ENST00000543525 MAP6D1Q9H9H5 199 aa9.85□□□□□ -0.83
PPME1-208ENST00000543525 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 CFC1P0CG37 223 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 PROK1P58294 105 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 UBE2D3P61077 147 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 UBE2D2P62837 147 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 SH2D6Q7Z4S9 175 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 LINC01587Q99440 93 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 SPXQ9BT56 116 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 KRTAP10-9P60411 292 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 DNAJC30Q96LL9 226 aa9.84□□□□□ -0.83
PPME1-208ENST00000543525 INSP01308 110 aa9.83□□□□□ -0.84
PPME1-208ENST00000543525 DEFB114Q30KQ6 69 aa9.83□□□□□ -0.84
PPME1-208ENST00000543525 CFAP126Q5VTH2 177 aa9.83□□□□□ -0.84
PPME1-208ENST00000543525 C10orf126Q8N4M7 172 aa9.83□□□□□ -0.84
PPME1-208ENST00000543525 TMEM86BQ8N661 226 aa9.83□□□□□ -0.84
PPME1-208ENST00000543525 Q96MF0 132 aa9.83□□□□□ -0.84
PPME1-208ENST00000543525 PRO1854Q9UHT4 67 aa9.83□□□□□ -0.84
PPME1-208ENST00000543525 TRBV20-1A0A075B6N2 111 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 TMEM238C9JI98 176 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 MRPS36P82909 103 aaKnown RBP9.82□□□□□ -0.84
PPME1-208ENST00000543525 MTURNQ8N3F0 131 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 SPANXA1Q9NS26 97 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 CR1P17927 2039 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 IGHV3-64A0A075B6Q5 118 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 ATP6V0E2Q8NHE4 81 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 TIMM21Q9BVV7 248 aa9.82□□□□□ -0.84
PPME1-208ENST00000543525 BEAN1Q3B7T3 259 aa9.81□□□□□ -0.84
PPME1-208ENST00000543525 TEX29Q8N6K0 151 aa9.81□□□□□ -0.84
PPME1-208ENST00000543525 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
PPME1-208ENST00000543525 RS1O15537 224 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 PRM2P04554 102 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 SFTA2Q6UW10 78 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 Q6ZSN1 163 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 C11orf72Q8NBR9 251 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 CHCHD7Q9BUK0 85 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 TSSC4Q9Y5U2 329 aaPredicted RBP9.8□□□□□ -0.84
PPME1-208ENST00000543525 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
PPME1-208ENST00000543525 TRAV25A0A0B4J276 109 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 TINCRA0A1B0GVN0 87 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 A4D1N5 150 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 GAGE12HA6NDE8 117 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 IGHV3-53P01767 116 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 PRRC2AP48634 2157 aaKnown RBP9.8□□□□□ -0.84
PPME1-208ENST00000543525 NIPBLQ6KC79 2804 aaeCLIP9.8□□□□□ -0.84
PPME1-208ENST00000543525 FAM104AQ969W3 186 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 SIGMAR1Q99720 223 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 C1QTNF4Q9BXJ3 329 aa9.8□□□□□ -0.84
PPME1-208ENST00000543525 A0A0B4J2C4 111 aa9.79□□□□□ -0.84
PPME1-208ENST00000543525 A0A0J9YXY3 114 aa9.79□□□□□ -0.84
PPME1-208ENST00000543525 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
PPME1-208ENST00000543525 MUSTN1Q8IVN3 82 aa9.79□□□□□ -0.84
PPME1-208ENST00000543525 UBE2D4Q9Y2X8 147 aa9.79□□□□□ -0.84
PPME1-208ENST00000543525 TCL1BO95988 128 aa9.78□□□□□ -0.84
PPME1-208ENST00000543525 SMCPP49901 116 aaPredicted RBP9.78□□□□□ -0.84
PPME1-208ENST00000543525 CEMP1Q6PRD7 247 aaPredicted RBP9.78□□□□□ -0.84
PPME1-208ENST00000543525 IGHV1-58A0A0C4DH39 117 aa9.78□□□□□ -0.84
PPME1-208ENST00000543525 Q6ZSV7 163 aa9.78□□□□□ -0.84
PPME1-208ENST00000543525 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
PPME1-208ENST00000543525 TMEM263Q8WUH6 116 aaKnown RBP9.78□□□□□ -0.84
PPME1-208ENST00000543525 SPATA25Q9BR10 227 aa9.78□□□□□ -0.84
PPME1-208ENST00000543525 ERG28Q9UKR5 140 aa9.78□□□□□ -0.84
PPME1-208ENST00000543525 VPS13CQ709C8 3753 aa9.77□□□□□ -0.84
PPME1-208ENST00000543525 IGHV3-33P01772 117 aa9.77□□□□□ -0.85
PPME1-208ENST00000543525 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.76□□□□□ -0.85
PPME1-208ENST00000543525 IGKV2-29A2NJV5 120 aaPredicted RBP9.76□□□□□ -0.85
PPME1-208ENST00000543525 SCGB1A1P11684 91 aa9.76□□□□□ -0.85
PPME1-208ENST00000543525 FOXI1Q12951 378 aa9.76□□□□□ -0.85
PPME1-208ENST00000543525 RNASE13Q5GAN3 156 aaKnown RBP9.76□□□□□ -0.85
PPME1-208ENST00000543525 STHQ8IWL8 128 aa9.76□□□□□ -0.85
PPME1-208ENST00000543525 Q9UF83 564 aa9.76□□□□□ -0.85
PPME1-208ENST00000543525 TRAV8-3A0A0A6YYJ7 113 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 AZU1P20160 251 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 Q6ZUT4 128 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 KRTAP1-3Q8IUG1 177 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 SBSPONQ8IVN8 264 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 VSIG2Q96IQ7 327 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 GEMIN7Q9H840 131 aaKnown RBP9.75□□□□□ -0.85
PPME1-208ENST00000543525 XCL2Q9UBD3 114 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 NDUFA12Q9UI09 145 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 SORL1Q92673 2214 aa9.75□□□□□ -0.85
PPME1-208ENST00000543525 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
PPME1-208ENST00000543525 INSL3P51460 131 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms