RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
KDM2B-216ENST00000543025 RBMY1A1P0DJD3 496 aaKnown RBP12.17□□□□□ -0.46
KDM2B-216ENST00000543025 RBMY1CP0DJD4 496 aa12.17□□□□□ -0.46
KDM2B-216ENST00000543025 RBMY1FQ15415 496 aaKnown RBP12.17□□□□□ -0.46
KDM2B-216ENST00000543025 A4D1N5 150 aa12.16□□□□□ -0.46
KDM2B-216ENST00000543025 TCTEX1D4Q5JR98 221 aa12.16□□□□□ -0.46
KDM2B-216ENST00000543025 PYGO1Q9Y3Y4 419 aa12.16□□□□□ -0.46
KDM2B-216ENST00000543025 SCGB1C2P0DMR2 95 aa12.16□□□□□ -0.46
KDM2B-216ENST00000543025 TRAV2A0A0B4J234 112 aa12.15□□□□□ -0.46
KDM2B-216ENST00000543025 HTN1P15515 57 aa12.15□□□□□ -0.46
KDM2B-216ENST00000543025 TEN1Q86WV5 123 aa12.15□□□□□ -0.46
KDM2B-216ENST00000543025 CSPG4Q6UVK1 2322 aa12.15□□□□□ -0.47
KDM2B-216ENST00000543025 CD28P10747 220 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 KRTAP1-1Q07627 177 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 PTH2Q96A98 100 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 ZNF702PQ9H963 129 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 TEX15Q9BXT5 2789 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 IGHV3-73A0A0B4J1V6 119 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 A0A0B4J2C4 111 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 KNCNA6PVL3 124 aa12.14□□□□□ -0.47
KDM2B-216ENST00000543025 A8MWV9 139 aa12.13□□□□□ -0.47
KDM2B-216ENST00000543025 CRYBA4P53673 196 aa12.13□□□□□ -0.47
KDM2B-216ENST00000543025 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
KDM2B-216ENST00000543025 PPDPFLQ8WWR9 84 aa12.13□□□□□ -0.47
KDM2B-216ENST00000543025 DEFB131AP59861 70 aa12.13□□□□□ -0.47
KDM2B-216ENST00000543025 MRPS36P82909 103 aaKnown RBP12.13□□□□□ -0.47
KDM2B-216ENST00000543025 TMEM263Q8WUH6 116 aaKnown RBP12.13□□□□□ -0.47
KDM2B-216ENST00000543025 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
KDM2B-216ENST00000543025 TNFRSF18Q9Y5U5 241 aa12.13□□□□□ -0.47
KDM2B-216ENST00000543025 IGHV3-33P01772 117 aa12.12□□□□□ -0.47
KDM2B-216ENST00000543025 SPXQ9BT56 116 aa12.12□□□□□ -0.47
KDM2B-216ENST00000543025 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
KDM2B-216ENST00000543025 M0R2P5 195 aa12.12□□□□□ -0.47
KDM2B-216ENST00000543025 IGHV3-30-3P0DP02 117 aa12.12□□□□□ -0.47
KDM2B-216ENST00000543025 PROK1P58294 105 aa12.12□□□□□ -0.47
KDM2B-216ENST00000543025 Q6YL49 198 aa12.12□□□□□ -0.47
KDM2B-216ENST00000543025 TIMM21Q9BVV7 248 aa12.12□□□□□ -0.47
KDM2B-216ENST00000543025 SETXQ7Z333 2677 aaKnown RBP12.12□□□□□ -0.47
KDM2B-216ENST00000543025 A0A0J9YXY3 114 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 CYSRT1A8MQ03 144 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 A8MTW9 85 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 EIF4EBP3O60516 100 aaPredicted RBP12.11□□□□□ -0.47
KDM2B-216ENST00000543025 FAM104AQ969W3 186 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 DUX3Q96PT4 197 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 ERG28Q9UKR5 140 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 H3BMM0 161 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 CDIP1Q9H305 208 aa12.11□□□□□ -0.47
KDM2B-216ENST00000543025 SLURP1P55000 103 aa12.1□□□□□ -0.47
KDM2B-216ENST00000543025 PIK3CD-AS1Q5SR53 167 aa12.1□□□□□ -0.47
KDM2B-216ENST00000543025 CARD19Q96LW7 228 aa12.1□□□□□ -0.47
KDM2B-216ENST00000543025 ACANP16112 2415 aa12.1□□□□□ -0.47
KDM2B-216ENST00000543025 ZNF415Q09FC8 603 aa12.09□□□□□ -0.47
KDM2B-216ENST00000543025 DEFB136Q30KP8 78 aa12.09□□□□□ -0.47
KDM2B-216ENST00000543025 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
KDM2B-216ENST00000543025 FSHBP01225 129 aa12.09□□□□□ -0.47
KDM2B-216ENST00000543025 RBMY1BA6NDE4 496 aaKnown RBP12.08□□□□□ -0.48
KDM2B-216ENST00000543025 RBMY1EA6NEQ0 496 aaKnown RBP12.08□□□□□ -0.48
KDM2B-216ENST00000543025 RBMY1DP0C7P1 496 aaKnown RBP12.08□□□□□ -0.48
KDM2B-216ENST00000543025 IGHV1-58A0A0C4DH39 117 aa12.08□□□□□ -0.48
KDM2B-216ENST00000543025 A0A1B0GV72 72 aa12.08□□□□□ -0.48
KDM2B-216ENST00000543025 H7C2G1 150 aa12.08□□□□□ -0.48
KDM2B-216ENST00000543025 FHL3Q13643 280 aa12.08□□□□□ -0.48
KDM2B-216ENST00000543025 ANKRD29Q8N6D5 301 aa12.08□□□□□ -0.48
KDM2B-216ENST00000543025 SMR3AQ99954 134 aa12.08□□□□□ -0.48
KDM2B-216ENST00000543025 TRAV8-3A0A0A6YYJ7 113 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 SLC25A20O43772 301 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 PRM2P04554 102 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 C18orf65Q6ZTR6 163 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 SPANXA1Q9NS26 97 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 SORL1Q92673 2214 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 CIDEAO60543 219 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 Q1RN00 199 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 RNASE13Q5GAN3 156 aaKnown RBP12.07□□□□□ -0.48
KDM2B-216ENST00000543025 LITAFQ99732 161 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 CHCHD7Q9BUK0 85 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 PEMTQ9UBM1 199 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 TLN2Q9Y4G6 2542 aa12.07□□□□□ -0.48
KDM2B-216ENST00000543025 TINCRA0A1B0GVN0 87 aa12.06□□□□□ -0.48
KDM2B-216ENST00000543025 ADARB2-AS1A8MUL3 147 aa12.06□□□□□ -0.48
KDM2B-216ENST00000543025 M0QXV9 152 aa12.06□□□□□ -0.48
KDM2B-216ENST00000543025 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
KDM2B-216ENST00000543025 C9JAW5 83 aa12.06□□□□□ -0.48
KDM2B-216ENST00000543025 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
KDM2B-216ENST00000543025 Q6ZSN1 163 aa12.05□□□□□ -0.48
KDM2B-216ENST00000543025 Q9UF83 564 aa12.05□□□□□ -0.48
KDM2B-216ENST00000543025 NDUFA12Q9UI09 145 aa12.05□□□□□ -0.48
KDM2B-216ENST00000543025 VSIG2Q96IQ7 327 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 SPANXDQ9BXN6 97 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 SPANXCQ9NY87 97 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 LY6G6DO95868 133 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 SPINK8P0C7L1 97 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 Q6ZUT4 128 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 DNAJC30Q96LL9 226 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 MAP6D1Q9H9H5 199 aa12.04□□□□□ -0.48
KDM2B-216ENST00000543025 ANK3Q12955 4377 aaKnown RBP12.03□□□□□ -0.48
KDM2B-216ENST00000543025 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.03□□□□□ -0.48
KDM2B-216ENST00000543025 IGKV2-29A2NJV5 120 aaPredicted RBP12.03□□□□□ -0.48
KDM2B-216ENST00000543025 ATXN8Q156A1 80 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms