RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 NAP1L6A6NFF2 107 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 FAM25EA8MYX2 175 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 C17orf112F2Z3M2 114 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 H3BVH4 76 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 K7EQM0 130 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 NDUFB6O95139 128 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 TCRAP04437 139 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 ARMS2P0C7Q2 107 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 KRTAP5-9P26371 169 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 XCL1P47992 114 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 GNG5P63218 68 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 ZNF56Q15929 161 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 GAGE2EQ4V326 116 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 DNLZQ5SXM8 178 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 FAM19A2Q8N3H0 131 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 OR5A1Q8NGJ0 315 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 OR5C1Q8NGR4 320 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 TMEM243Q9BU79 118 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 WDR61Q9GZS3 305 aaKnown RBP1.74□□□□□ -2.13
CHD4-209ENST00000542717 GAGE2DQ9UEU5 116 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 PSG8Q9UQ74 426 aa1.74□□□□□ -2.13
CHD4-209ENST00000542717 C9orf92A6NGG3 77 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 FABP5P3A8MUU1 101 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 B4DEV8 164 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 KRBOX1C9JBD0 128 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 M0R381 172 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 MALP21145 153 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 SPRR2EP22531 72 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 SPRR2BP35325 72 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 SPRR2AP35326 72 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 UBE2AP49459 152 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 RAB4BP61018 213 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 FLI1Q01543 452 aaPredicted RBP1.73□□□□□ -2.13
CHD4-209ENST00000542717 IL15RAQ13261 267 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 RAB32Q13637 225 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 IQCJQ1A5X6 159 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 SAPCD1Q5SSQ6 148 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 LINC00242Q5T6M2 205 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 PQLC2Q6ZP29 291 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 PRNTQ86SH4 94 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 ZFP82Q8N141 532 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 C3orf22Q8N5N4 141 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 C5orf17Q8NAS9 161 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 NUP35Q8NFH5 326 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 OR2D3Q8NGH3 330 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 RBM38Q9H0Z9 239 aaKnown RBP1.73□□□□□ -2.13
CHD4-209ENST00000542717 V9GYH0 126 aa1.73□□□□□ -2.13
CHD4-209ENST00000542717 MDN1Q9NU22 5596 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 A0A1W2PPV4 95 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 GRIFINA4D1Z8 144 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 H3BMQ9 156 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 M0R036 132 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 HMGB3O15347 200 aaKnown RBP1.72□□□□□ -2.13
CHD4-209ENST00000542717 TPT1P13693 172 aaKnown RBP1.72□□□□□ -2.13
CHD4-209ENST00000542717 BTCP35070 178 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 CRIP1P50238 77 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 TMBIM6P55061 237 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 RPS20P60866 119 aaKnown RBP1.72□□□□□ -2.13
CHD4-209ENST00000542717 NHLH2Q02577 135 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 CNPY1Q3B7I2 92 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 AMMECR1LQ6DCA0 310 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 RNASEKQ6P5S7 137 aaKnown RBP1.72□□□□□ -2.13
CHD4-209ENST00000542717 PGLYRP4Q96LB8 373 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 IMMP2LQ96T52 175 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 EPDR1Q9UM22 224 aa1.72□□□□□ -2.13
CHD4-209ENST00000542717 TRAV34A0A0B4J273 112 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 CENPXA8MT69 81 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 CCL25O15444 150 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 BCL2L11O43521 198 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 BCE1O60756 84 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 SH2D1AO60880 128 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 SPINK1P00995 79 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 STAG3L2P0CL84 134 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 STAG3L3P0CL85 134 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 ARL14EPLP0DKL9 152 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 GCHFRP30047 84 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 SUMO1P63165 101 aaKnown RBP1.71□□□□□ -2.14
CHD4-209ENST00000542717 LINC01559Q495D7 138 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 TRIQKQ629K1 86 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 COX8CQ7Z4L0 72 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 SCGB1C1Q8TD33 95 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 MED28Q9H204 178 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 TMEM167BQ9NRX6 74 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 ARL2-SNX15V9GYD0 113 aa1.71□□□□□ -2.14
CHD4-209ENST00000542717 TMSB15BA0A087X1C1 80 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 A0A1W2PRE2 83 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 A6NHS1 94 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 H0YIZ8 118 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 M0QY20 66 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 PEX7O00628 323 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 SLC25A20O43772 301 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 NOL3O60936 208 aaKnown RBP1.7□□□□□ -2.14
CHD4-209ENST00000542717 CXCL1P09341 107 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 SMIM17P0DL12 118 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 ESDP10768 282 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 RPL12P30050 165 aaKnown RBP1.7□□□□□ -2.14
CHD4-209ENST00000542717 S100A5P33763 92 aa1.7□□□□□ -2.14
CHD4-209ENST00000542717 CDC34P49427 236 aaPredicted RBP1.7□□□□□ -2.14
CHD4-209ENST00000542717 LBHQ53QV2 105 aaPredicted RBP1.7□□□□□ -2.14
CHD4-209ENST00000542717 Q86TA4 180 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms