RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 C16orf74Q96GX8 76 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 TMEM191AQ9H0A3 160 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 VCX2Q9H322 139 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 OSTCQ9NRP0 149 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 YTHDF2Q9Y5A9 579 aaKnown RBP3.79□□□□□ -1.8
CPSF7-220ENST00000541963 NBEAL2Q6ZNJ1 2754 aa3.79□□□□□ -1.8
CPSF7-220ENST00000541963 SACSQ9NZJ4 4579 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 RYR3Q15413 4870 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 TRBV7-9A0A0J9YWB2 115 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 A0A1B0GV50 99 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 RPL37AP8A6NKH3 93 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 CXorf1O96002 111 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 CT45A10P0DMU9 189 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 UBE2L3P68036 154 aaKnown RBP3.78□□□□□ -1.8
CPSF7-220ENST00000541963 PLECQ15149 4684 aaKnown RBP3.78□□□□□ -1.8
CPSF7-220ENST00000541963 SLC25A34Q6PIV7 304 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 EXOC3-AS1Q8N2X6 119 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 CHCHD1Q96BP2 118 aaKnown RBP3.78□□□□□ -1.8
CPSF7-220ENST00000541963 FXYD5Q96DB9 178 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 FAM167A-AS1Q96KT0 104 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 NAT8BQ9UHF3 227 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 APLNQ9ULZ1 77 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 CELA1Q9UNI1 258 aa3.78□□□□□ -1.8
CPSF7-220ENST00000541963 TIMM8BQ9Y5J9 83 aaPredicted RBP3.78□□□□□ -1.8
CPSF7-220ENST00000541963 TRAV12-3A0A0B4J271 114 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 C7orf71A4D174 169 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 RBAKDNA6NC62 111 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 PGPA6NDG6 321 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 K7EQM0 130 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 M0R3E3 92 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 SIVA1O15304 175 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 HSBP1O75506 76 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 GAS8-AS1O95177 125 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 P0DMU3 169 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 FAM231AP0DMU4 169 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 FAM231CP0DMU5 169 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 HTN3P15516 51 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 ZNF138P52744 262 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 FGF8P55075 233 aaPredicted RBP3.77□□□□□ -1.81
CPSF7-220ENST00000541963 UBE2G1P62253 170 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 ERCC8Q13216 396 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 ZNF726P1Q15940 193 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 Q8N377 158 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 TMEM263Q8WUH6 116 aaKnown RBP3.77□□□□□ -1.81
CPSF7-220ENST00000541963 TMEM70Q9BUB7 260 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 TPPP3Q9BW30 176 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 AGPAT4-IT1Q9H0P7 198 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 Q9H3A6 140 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 OTORQ9NRC9 128 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 TMEM167BQ9NRX6 74 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 ZNF492Q9P255 531 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 HSPB8Q9UJY1 196 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 RYR2Q92736 4967 aa3.77□□□□□ -1.81
CPSF7-220ENST00000541963 TENM3Q9P273 2699 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 KLLNB2CW77 178 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 H3BRM9 83 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 ATP5G1P05496 136 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 DEFB130BP0DP73 79 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 DEFB130AP0DP74 79 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 AZU1P20160 251 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 RNASE4P34096 147 aaKnown RBP3.76□□□□□ -1.81
CPSF7-220ENST00000541963 ATP5G3P48201 142 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 C15orf53Q8NAA6 179 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 FAM19A4Q96LR4 140 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 SIGMAR1Q99720 223 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 LINC00467Q9BRT7 94 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 NOP10Q9NPE3 64 aaKnown RBP3.76□□□□□ -1.81
CPSF7-220ENST00000541963 LENEPQ9Y5L5 61 aa3.76□□□□□ -1.81
CPSF7-220ENST00000541963 DYNC2H1Q8NCM8 4307 aaKnown RBP3.76□□□□□ -1.81
CPSF7-220ENST00000541963 HYDINQ4G0P3 5121 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 IGKV2-40A0A087WW87 121 aaPredicted RBP3.75□□□□□ -1.81
CPSF7-220ENST00000541963 IGHV3-16A0A0C4DH30 117 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 A0A1B0GW15 77 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 FAM231BA6NCW3 169 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 FBLL1A6NHQ2 334 aaKnown RBP3.75□□□□□ -1.81
CPSF7-220ENST00000541963 F5H768 121 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 IGKV2D-40P01614 121 aaPredicted RBP3.75□□□□□ -1.81
CPSF7-220ENST00000541963 APCSP02743 223 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 PRM2P04554 102 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 C3orf79P0CE67 100 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 STAG3L2P0CL84 134 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 PRB4P10163 310 aaPredicted RBP3.75□□□□□ -1.81
CPSF7-220ENST00000541963 HINT1P49773 126 aaPredicted RBP3.75□□□□□ -1.81
CPSF7-220ENST00000541963 GNG4P50150 75 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 TCL1AP56279 114 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 DAZ2Q13117 558 aaKnown RBP3.75□□□□□ -1.81
CPSF7-220ENST00000541963 HIGD2BQ4VC39 106 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 BVES-AS1Q5T3Y7 98 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 FAM231DQ6ZW35 169 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 SPATA12Q7Z6I5 190 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 KRTAP7-1Q8IUC3 87 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 UBE2DNLQ8IWF7 75 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 BOD1L2Q8IYS8 172 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 POM121L12Q8N7R1 296 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 Q8N976 141 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 FER1L6-AS1Q8NA97 138 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 OR10AG1Q8NH19 301 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 NDFIP1Q9BT67 221 aa3.75□□□□□ -1.81
CPSF7-220ENST00000541963 SPANXDQ9BXN6 97 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms