RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 FAM19A3Q7Z5A8 133 aa3.72□□□□□ -1.81
SNHG1-218ENST00000541615 LINC00167Q96N53 147 aa3.72□□□□□ -1.81
SNHG1-218ENST00000541615 C19orf73Q9NVV2 129 aa3.72□□□□□ -1.81
SNHG1-218ENST00000541615 CEP290O15078 2479 aa3.71□□□□□ -1.81
SNHG1-218ENST00000541615 IGKV3D-20A0A0C4DH25 116 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 KLLNB2CW77 178 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 PSCAO43653 123 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 MRPL33O75394 65 aaKnown RBP3.71□□□□□ -1.82
SNHG1-218ENST00000541615 CTSGP08311 255 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 RPL27AP46776 148 aaKnown RBP3.71□□□□□ -1.82
SNHG1-218ENST00000541615 LINC00205P59089 165 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 C19orf54Q5BKX5 351 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 MIR7-3HGQ8N6C7 128 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 SPTSSBQ8NFR3 76 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 CCL4L1Q8NHW4 92 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 ZNF625Q96I27 306 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-218ENST00000541615 MUC22E2RYF6 1773 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-218ENST00000541615 NACAE9PAV3 2078 aa3.71□□□□□ -1.82
SNHG1-218ENST00000541615 LTBP2Q14767 1821 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 DOCK7Q96N67 2140 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 CUL9Q8IWT3 2517 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 IGKV3D-15A0A087WSY6 115 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 C16orf90A8MZG2 172 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 H0Y8X5 98 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 CCL24O00175 119 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 PSPHP1O15172 72 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 CGB3P0DN86 165 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 CGB7P0DN87 165 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 LINC00313P59037 77 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 DEFB114Q30KQ6 69 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 C9orf116Q5BN46 136 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-218ENST00000541615 Q5VV11 94 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 NOTCH2NLQ7Z3S9 236 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 C9orf106Q8NAJ2 232 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 C20orf203Q8NBC4 194 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 C1orf64Q8NEQ6 169 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 ITLN2Q8WWU7 325 aaPredicted RBP3.7□□□□□ -1.82
SNHG1-218ENST00000541615 RNF5Q99942 180 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 KRTAP9-3Q9BYQ3 159 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 DEC1Q9P2X7 70 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 USF3Q68DE3 2245 aa3.7□□□□□ -1.82
SNHG1-218ENST00000541615 COL6A3P12111 3177 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 TRIOBPQ9H2D6 2365 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 IGKV2-40A0A087WW87 121 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-218ENST00000541615 TRAV10A0A0B4J240 114 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 A0A0J9YXV3 536 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 C5orf67F2Z3F1 127 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 C3orf84H3BNL1 204 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 IGKV2D-40P01614 121 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-218ENST00000541615 MGPP08493 103 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 GNLYP22749 145 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 C9orf47Q6ZRZ4 202 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 SCXQ7RTU7 201 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 GGNQ86UU5 652 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 Q9HAA7 133 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 C2orf16Q68DN1 1984 aa3.69□□□□□ -1.82
SNHG1-218ENST00000541615 UNC13CQ8NB66 2214 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 MKI67P46013 3256 aaKnown RBP3.68□□□□□ -1.82
SNHG1-218ENST00000541615 IGLV4-3A0A075B6K6 122 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 IGLV5-45A0A087WSX0 123 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 LOC101927531A0A1B0GV80 90 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 A6NED7 52 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 I3L2K1 104 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 NCR3O14931 201 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 LY6HO94772 140 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 HAMPP81172 84 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 FBXL19-AS1Q494R0 122 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 C9orf66Q5T8R8 295 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 IGFL3Q6UXB1 125 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 CASC2Q6XLA1 102 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 RPL39LQ96EH5 51 aaKnown RBP3.68□□□□□ -1.82
SNHG1-218ENST00000541615 FAM218AQ96MZ4 157 aa3.68□□□□□ -1.82
SNHG1-218ENST00000541615 CENPFP49454 3210 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 LCE6AA0A183 80 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 IGKV1-17P01599 117 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 IGKV1-16P04430 117 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 RPL36AP83881 106 aaKnown RBP3.67□□□□□ -1.82
SNHG1-218ENST00000541615 C17orf58Q2M2W7 97 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 DEFB110Q30KQ9 67 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 Q6ZS52 159 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 DEFB123Q8N688 67 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 RPL36ALQ969Q0 106 aaKnown RBP3.67□□□□□ -1.82
SNHG1-218ENST00000541615 Q9BRP9 147 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 DEFB126Q9BYW3 111 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 CELA1Q9UNI1 258 aa3.67□□□□□ -1.82
SNHG1-218ENST00000541615 CACNA1DQ01668 2161 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 SZT2Q5T011 3432 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 FER1L5A0AVI2 2057 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 IGLV3-12A0A075B6K2 115 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 IGHV3-64A0A075B6Q5 118 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 IGHV1OR15-1A0A075B7D0 117 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 IGHV3-15A0A0B4J1V0 119 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 IGLV5-39A0A0G2JS06 123 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 SRRM5B3KS81 715 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 LECT2O14960 151 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 PLA2G1BP04054 148 aaKnown RBP3.66□□□□□ -1.82
SNHG1-218ENST00000541615 RPL39P62891 51 aaKnown RBP3.66□□□□□ -1.82
SNHG1-218ENST00000541615 Q6ZQT0 140 aa3.66□□□□□ -1.82
SNHG1-218ENST00000541615 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms